EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000021076 (Gene tree)
Gene ID: 528167
Gene Symbol: TNRC6B
Alias: -
Full Name: Bos taurus trinucleotide repeat containing 6B (TNRC6B)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 176833 bases
Position: chr5:111480932-111657764
Accession: NM_001192655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000071089	Ago_hook	PF10427.9	2.3e-19	1	1
ENSBTAP00000070436	Ago_hook	PF10427.9	2.9e-19	1	1
ENSBTAP00000028072	Ago_hook	PF10427.9	3.4e-19	1	1
ENSBTAP00000063441	Ago_hook	PF10427.9	2e-18	1	1
ENSBTAP00000063294	Ago_hook	PF10427.9	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000077638	-	5340	-	ENSBTAP00000071089	1779 (aa)	XP_010804057	UPI000D5344A6
ENSBTAT00000071094	-	5265	-	ENSBTAP00000063441	1754 (aa)	-	-
ENSBTAT00000028072	-	6030	-	ENSBTAP00000028072	1835 (aa)	-	F1MY06
ENSBTAT00000079704	-	5181	-	ENSBTAP00000063294	1726 (aa)	XP_024847603	UPI0000EBC9D9
ENSBTAT00000068585	-	5426	-	ENSBTAP00000070436	1789 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000021076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000021076	TNRC6B	98	38.081	ENSBTAG00000018658	TNRC6C	96	39.935
ENSBTAG00000021076	TNRC6B	100	37.506	ENSBTAG00000017999	TNRC6A	99	40.720

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021076	TNRC6B	99	96.057	ENSG00000100354	TNRC6B	100	96.063	Homo_sapiens
ENSBTAG00000021076	TNRC6B	100	96.678	ENSAMEG00000011025	TNRC6B	99	96.678	Ailuropoda_melanoleuca
ENSBTAG00000021076	TNRC6B	98	87.317	ENSAPLG00000009347	TNRC6B	100	87.317	Anas_platyrhynchos
ENSBTAG00000021076	TNRC6B	99	72.855	ENSACAG00000007281	TNRC6B	100	73.103	Anolis_carolinensis
ENSBTAG00000021076	TNRC6B	100	96.187	ENSANAG00000035042	TNRC6B	100	96.178	Aotus_nancymaae
ENSBTAG00000021076	TNRC6B	85	47.851	ENSAMXG00000008707	tnrc6b	86	46.558	Astyanax_mexicanus
ENSBTAG00000021076	TNRC6B	99	96.112	ENSCJAG00000002732	TNRC6B	99	99.155	Callithrix_jacchus
ENSBTAG00000021076	TNRC6B	100	96.899	ENSCAFG00000001255	TNRC6B	100	96.929	Canis_familiaris
ENSBTAG00000021076	TNRC6B	99	96.234	ENSCAFG00020002189	TNRC6B	98	96.234	Canis_lupus_dingo
ENSBTAG00000021076	TNRC6B	99	98.651	ENSCHIG00000003491	TNRC6B	99	98.651	Capra_hircus
ENSBTAG00000021076	TNRC6B	100	96.063	ENSTSYG00000011836	TNRC6B	100	96.063	Carlito_syrichta
ENSBTAG00000021076	TNRC6B	99	94.532	ENSCPOG00000005705	TNRC6B	100	94.223	Cavia_porcellus
ENSBTAG00000021076	TNRC6B	100	94.935	ENSCCAG00000019912	TNRC6B	99	94.935	Cebus_capucinus
ENSBTAG00000021076	TNRC6B	99	95.293	ENSCATG00000029291	TNRC6B	99	95.640	Cercocebus_atys
ENSBTAG00000021076	TNRC6B	99	94.633	ENSCLAG00000016942	TNRC6B	98	94.438	Chinchilla_lanigera
ENSBTAG00000021076	TNRC6B	99	91.921	ENSCSAG00000006021	TNRC6B	99	91.966	Chlorocebus_sabaeus
ENSBTAG00000021076	TNRC6B	92	86.227	ENSCPBG00000022932	TNRC6B	99	85.938	Chrysemys_picta_bellii
ENSBTAG00000021076	TNRC6B	99	95.632	ENSCANG00000030776	TNRC6B	100	95.660	Colobus_angolensis_palliatus
ENSBTAG00000021076	TNRC6B	96	94.245	ENSCGRG00001020166	Tnrc6b	97	93.987	Cricetulus_griseus_chok1gshd
ENSBTAG00000021076	TNRC6B	99	94.350	ENSCGRG00000016696	Tnrc6b	100	94.161	Cricetulus_griseus_crigri
ENSBTAG00000021076	TNRC6B	100	94.276	ENSDNOG00000012744	TNRC6B	99	94.494	Dasypus_novemcinctus
ENSBTAG00000021076	TNRC6B	99	95.195	ENSDORG00000003386	Tnrc6b	98	95.110	Dipodomys_ordii
ENSBTAG00000021076	TNRC6B	99	87.078	ENSETEG00000006570	TNRC6B	100	87.500	Echinops_telfairi
ENSBTAG00000021076	TNRC6B	99	96.571	ENSEASG00005005306	TNRC6B	99	96.035	Equus_asinus_asinus
ENSBTAG00000021076	TNRC6B	100	97.277	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSBTAG00000021076	TNRC6B	59	97.070	ENSEEUG00000008690	-	60	97.070	Erinaceus_europaeus
ENSBTAG00000021076	TNRC6B	100	96.955	ENSFCAG00000004791	TNRC6B	99	96.955	Felis_catus
ENSBTAG00000021076	TNRC6B	95	87.581	ENSFALG00000012195	TNRC6B	100	87.345	Ficedula_albicollis
ENSBTAG00000021076	TNRC6B	99	94.915	ENSFDAG00000021368	TNRC6B	98	94.775	Fukomys_damarensis
ENSBTAG00000021076	TNRC6B	99	88.325	ENSGALG00000012050	TNRC6B	98	88.110	Gallus_gallus
ENSBTAG00000021076	TNRC6B	99	87.691	ENSGAGG00000025188	TNRC6B	99	87.432	Gopherus_agassizii
ENSBTAG00000021076	TNRC6B	99	96.002	ENSGGOG00000008444	TNRC6B	100	96.005	Gorilla_gorilla
ENSBTAG00000021076	TNRC6B	99	95.137	ENSHGLG00000009306	TNRC6B	100	94.786	Heterocephalus_glaber_female
ENSBTAG00000021076	TNRC6B	99	94.912	ENSHGLG00100018108	TNRC6B	99	94.323	Heterocephalus_glaber_male
ENSBTAG00000021076	TNRC6B	81	46.476	ENSIPUG00000001515	tnrc6b	93	46.055	Ictalurus_punctatus
ENSBTAG00000021076	TNRC6B	99	95.647	ENSSTOG00000008927	TNRC6B	98	95.616	Ictidomys_tridecemlineatus
ENSBTAG00000021076	TNRC6B	99	94.178	ENSJJAG00000015779	Tnrc6b	98	94.323	Jaculus_jaculus
ENSBTAG00000021076	TNRC6B	99	61.299	ENSLACG00000000628	-	100	61.627	Latimeria_chalumnae
ENSBTAG00000021076	TNRC6B	78	95.688	ENSLAFG00000014473	TNRC6B	100	95.688	Loxodonta_africana
ENSBTAG00000021076	TNRC6B	99	95.402	ENSMFAG00000003862	TNRC6B	99	95.754	Macaca_fascicularis
ENSBTAG00000021076	TNRC6B	99	95.829	ENSMMUG00000021345	TNRC6B	99	95.886	Macaca_mulatta
ENSBTAG00000021076	TNRC6B	98	95.767	ENSMNEG00000042745	TNRC6B	99	95.826	Macaca_nemestrina
ENSBTAG00000021076	TNRC6B	99	95.895	ENSMLEG00000041780	TNRC6B	100	95.891	Mandrillus_leucophaeus
ENSBTAG00000021076	TNRC6B	99	88.261	ENSMGAG00000012333	TNRC6B	100	87.935	Meleagris_gallopavo
ENSBTAG00000021076	TNRC6B	99	94.124	ENSMAUG00000016123	Tnrc6b	98	94.101	Mesocricetus_auratus
ENSBTAG00000021076	TNRC6B	100	96.072	ENSMICG00000014056	TNRC6B	100	96.072	Microcebus_murinus
ENSBTAG00000021076	TNRC6B	96	95.000	ENSMOCG00000020334	Tnrc6b	98	95.000	Microtus_ochrogaster
ENSBTAG00000021076	TNRC6B	99	93.789	MGP_CAROLIEiJ_G0020043	Tnrc6b	98	93.711	Mus_caroli
ENSBTAG00000021076	TNRC6B	99	93.845	ENSMUSG00000047888	Tnrc6b	99	93.472	Mus_musculus
ENSBTAG00000021076	TNRC6B	99	93.446	MGP_PahariEiJ_G0020045	Tnrc6b	98	93.258	Mus_pahari
ENSBTAG00000021076	TNRC6B	99	94.147	MGP_SPRETEiJ_G0020941	Tnrc6b	98	93.961	Mus_spretus
ENSBTAG00000021076	TNRC6B	97	97.719	ENSMPUG00000016442	TNRC6B	96	97.714	Mustela_putorius_furo
ENSBTAG00000021076	TNRC6B	100	96.078	ENSMLUG00000008765	TNRC6B	99	96.078	Myotis_lucifugus
ENSBTAG00000021076	TNRC6B	99	94.357	ENSNGAG00000021294	Tnrc6b	98	94.052	Nannospalax_galili
ENSBTAG00000021076	TNRC6B	89	96.386	ENSNLEG00000015311	TNRC6B	96	96.934	Nomascus_leucogenys
ENSBTAG00000021076	TNRC6B	90	92.517	ENSOPRG00000012054	TNRC6B	88	92.744	Ochotona_princeps
ENSBTAG00000021076	TNRC6B	99	95.088	ENSODEG00000013146	TNRC6B	98	94.947	Octodon_degus
ENSBTAG00000021076	TNRC6B	93	46.364	ENSONIG00000019679	-	99	41.467	Oreochromis_niloticus
ENSBTAG00000021076	TNRC6B	99	95.252	ENSOCUG00000016128	TNRC6B	98	95.222	Oryctolagus_cuniculus
ENSBTAG00000021076	TNRC6B	99	95.950	ENSOGAG00000011096	TNRC6B	99	95.972	Otolemur_garnettii
ENSBTAG00000021076	TNRC6B	99	98.320	ENSOARG00000017238	TNRC6B	98	98.320	Ovis_aries
ENSBTAG00000021076	TNRC6B	99	96.057	ENSPPAG00000028514	TNRC6B	100	96.063	Pan_paniscus
ENSBTAG00000021076	TNRC6B	100	96.895	ENSPPRG00000017741	TNRC6B	100	96.815	Panthera_pardus
ENSBTAG00000021076	TNRC6B	99	92.135	ENSPTIG00000022064	TNRC6B	98	93.663	Panthera_tigris_altaica
ENSBTAG00000021076	TNRC6B	99	96.002	ENSPTRG00000047826	TNRC6B	100	96.005	Pan_troglodytes
ENSBTAG00000021076	TNRC6B	98	90.231	ENSPANG00000009271	TNRC6B	99	90.264	Papio_anubis
ENSBTAG00000021076	TNRC6B	99	87.514	ENSPSIG00000005318	TNRC6B	100	87.144	Pelodiscus_sinensis
ENSBTAG00000021076	TNRC6B	99	93.683	ENSPEMG00000011403	Tnrc6b	98	93.382	Peromyscus_maniculatus_bairdii
ENSBTAG00000021076	TNRC6B	99	87.122	ENSPCIG00000020347	TNRC6B	99	87.397	Phascolarctos_cinereus
ENSBTAG00000021076	TNRC6B	69	49.701	ENSPFOG00000006033	-	54	50.733	Poecilia_formosa
ENSBTAG00000021076	TNRC6B	67	44.623	ENSPLAG00000001418	-	87	46.919	Poecilia_latipinna
ENSBTAG00000021076	TNRC6B	56	53.808	ENSPMEG00000006371	-	90	54.502	Poecilia_mexicana
ENSBTAG00000021076	TNRC6B	99	95.804	ENSPPYG00000011849	TNRC6B	100	95.831	Pongo_abelii
ENSBTAG00000021076	TNRC6B	75	91.975	ENSPCAG00000008739	TNRC6B	76	88.337	Procavia_capensis
ENSBTAG00000021076	TNRC6B	100	96.181	ENSPCOG00000020790	TNRC6B	100	96.181	Propithecus_coquereli
ENSBTAG00000021076	TNRC6B	92	94.696	ENSPVAG00000004975	TNRC6B	92	94.508	Pteropus_vampyrus
ENSBTAG00000021076	TNRC6B	99	93.645	ENSRNOG00000024907	Tnrc6b	98	93.345	Rattus_norvegicus
ENSBTAG00000021076	TNRC6B	99	95.731	ENSRBIG00000035576	TNRC6B	100	95.718	Rhinopithecus_bieti
ENSBTAG00000021076	TNRC6B	99	95.676	ENSRROG00000031135	TNRC6B	99	95.700	Rhinopithecus_roxellana
ENSBTAG00000021076	TNRC6B	99	96.270	ENSSBOG00000029743	TNRC6B	100	96.270	Saimiri_boliviensis_boliviensis
ENSBTAG00000021076	TNRC6B	99	87.023	ENSSHAG00000009692	TNRC6B	100	87.093	Sarcophilus_harrisii
ENSBTAG00000021076	TNRC6B	71	86.441	ENSSARG00000007971	-	70	93.182	Sorex_araneus
ENSBTAG00000021076	TNRC6B	92	87.085	ENSSPUG00000010801	TNRC6B	100	86.730	Sphenodon_punctatus
ENSBTAG00000021076	TNRC6B	100	96.732	ENSSSCG00000000078	TNRC6B	100	96.685	Sus_scrofa
ENSBTAG00000021076	TNRC6B	93	86.808	ENSTGUG00000010138	-	100	86.518	Taeniopygia_guttata
ENSBTAG00000021076	TNRC6B	99	93.998	ENSTTRG00000011465	TNRC6B	96	98.003	Tursiops_truncatus
ENSBTAG00000021076	TNRC6B	99	95.434	ENSUAMG00000007174	TNRC6B	99	95.434	Ursus_americanus
ENSBTAG00000021076	TNRC6B	99	96.787	ENSUMAG00000014336	TNRC6B	100	96.787	Ursus_maritimus
ENSBTAG00000021076	TNRC6B	69	89.732	ENSVPAG00000001467	TNRC6B	72	92.230	Vicugna_pacos
ENSBTAG00000021076	TNRC6B	100	96.950	ENSVVUG00000007064	TNRC6B	100	96.854	Vulpes_vulpes