EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000021195 (Gene tree)
Gene ID: 100336715
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 93695 bases
Position: chr26:8455337-8549031
Accession: 25434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000064360	DND1_DSRM	PF14709.7	1.4e-24	1	1
ENSBTAP00000061459	DND1_DSRM	PF14709.7	1.4e-24	1	1
ENSBTAP00000033080	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSBTAP00000064360	RRM_1	PF00076.22	7.4e-41	1	3
ENSBTAP00000064360	RRM_1	PF00076.22	7.4e-41	2	3
ENSBTAP00000064360	RRM_1	PF00076.22	7.4e-41	3	3
ENSBTAP00000061459	RRM_1	PF00076.22	9.3e-41	1	3
ENSBTAP00000061459	RRM_1	PF00076.22	9.3e-41	2	3
ENSBTAP00000061459	RRM_1	PF00076.22	9.3e-41	3	3
ENSBTAP00000033080	RRM_1	PF00076.22	1e-40	1	3
ENSBTAP00000033080	RRM_1	PF00076.22	1e-40	2	3
ENSBTAP00000033080	RRM_1	PF00076.22	1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000033157	-	1933	-	ENSBTAP00000033080	587 (aa)	XP_005225432	E1B7G9
ENSBTAT00000074074	-	1836	-	ENSBTAP00000064360	538 (aa)	XP_024841713	UPI000D5351B9
ENSBTAT00000074906	-	1881	-	ENSBTAP00000061459	569 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000021195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000021195	A1CF	55	33.893	ENSBTAG00000018845	DND1	77	33.893
ENSBTAG00000021195	A1CF	81	59.243	ENSBTAG00000002356	RBM47	73	59.688
ENSBTAG00000021195	A1CF	57	52.427	ENSBTAG00000006672	SYNCRIP	51	51.385
ENSBTAG00000021195	A1CF	74	72.000	ENSBTAG00000001696	RBM46	82	72.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021195	A1CF	100	96.468	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSBTAG00000021195	A1CF	100	74.454	ENSAPOG00000008259	a1cf	100	74.454	Acanthochromis_polyacanthus
ENSBTAG00000021195	A1CF	100	95.055	ENSAMEG00000000523	A1CF	100	93.950	Ailuropoda_melanoleuca
ENSBTAG00000021195	A1CF	100	78.198	ENSACIG00000008632	a1cf	100	78.182	Amphilophus_citrinellus
ENSBTAG00000021195	A1CF	97	78.318	ENSAOCG00000023744	a1cf	96	84.058	Amphiprion_ocellaris
ENSBTAG00000021195	A1CF	97	76.980	ENSAPEG00000009537	a1cf	100	74.795	Amphiprion_percula
ENSBTAG00000021195	A1CF	100	78.597	ENSATEG00000013720	a1cf	100	77.723	Anabas_testudineus
ENSBTAG00000021195	A1CF	100	89.031	ENSAPLG00000002964	A1CF	100	86.577	Anas_platyrhynchos
ENSBTAG00000021195	A1CF	100	85.714	ENSACAG00000015269	A1CF	100	84.014	Anolis_carolinensis
ENSBTAG00000021195	A1CF	100	96.840	ENSANAG00000019974	A1CF	100	96.252	Aotus_nancymaae
ENSBTAG00000021195	A1CF	97	77.840	ENSACLG00000017428	a1cf	100	75.662	Astatotilapia_calliptera
ENSBTAG00000021195	A1CF	100	73.884	ENSAMXG00000018180	a1cf	100	73.884	Astyanax_mexicanus
ENSBTAG00000021195	A1CF	100	95.604	ENSCJAG00000005045	A1CF	100	94.454	Callithrix_jacchus
ENSBTAG00000021195	A1CF	100	95.055	ENSCAFG00000015581	A1CF	100	93.613	Canis_familiaris
ENSBTAG00000021195	A1CF	100	95.055	ENSCAFG00020026421	A1CF	98	96.633	Canis_lupus_dingo
ENSBTAG00000021195	A1CF	100	97.311	ENSCHIG00000020411	A1CF	100	97.311	Capra_hircus
ENSBTAG00000021195	A1CF	94	96.040	ENSTSYG00000001755	A1CF	100	94.585	Carlito_syrichta
ENSBTAG00000021195	A1CF	100	82.515	ENSCAPG00000017386	A1CF	100	82.515	Cavia_aperea
ENSBTAG00000021195	A1CF	100	94.286	ENSCPOG00000009807	A1CF	100	93.950	Cavia_porcellus
ENSBTAG00000021195	A1CF	100	94.872	ENSCCAG00000018168	A1CF	100	93.950	Cebus_capucinus
ENSBTAG00000021195	A1CF	100	96.097	ENSCATG00000043715	A1CF	100	94.889	Cercocebus_atys
ENSBTAG00000021195	A1CF	100	94.698	ENSCLAG00000010424	A1CF	100	94.631	Chinchilla_lanigera
ENSBTAG00000021195	A1CF	100	95.055	ENSCSAG00000007032	A1CF	100	93.950	Chlorocebus_sabaeus
ENSBTAG00000021195	A1CF	98	91.065	ENSCHOG00000009089	A1CF	98	91.065	Choloepus_hoffmanni
ENSBTAG00000021195	A1CF	100	88.665	ENSCPBG00000026464	A1CF	100	87.081	Chrysemys_picta_bellii
ENSBTAG00000021195	A1CF	100	95.055	ENSCANG00000038032	A1CF	100	94.118	Colobus_angolensis_palliatus
ENSBTAG00000021195	A1CF	100	93.040	ENSCGRG00001017413	A1cf	100	92.605	Cricetulus_griseus_chok1gshd
ENSBTAG00000021195	A1CF	100	91.933	ENSCGRG00000017332	A1cf	100	91.933	Cricetulus_griseus_crigri
ENSBTAG00000021195	A1CF	100	74.419	ENSCSEG00000002361	a1cf	100	75.581	Cynoglossus_semilaevis
ENSBTAG00000021195	A1CF	100	75.743	ENSCVAG00000010520	a1cf	100	77.063	Cyprinodon_variegatus
ENSBTAG00000021195	A1CF	100	79.258	ENSDARG00000002968	a1cf	100	80.438	Danio_rerio
ENSBTAG00000021195	A1CF	100	94.505	ENSDNOG00000002829	A1CF	100	93.445	Dasypus_novemcinctus
ENSBTAG00000021195	A1CF	82	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSBTAG00000021195	A1CF	100	96.715	ENSEASG00005012924	A1CF	100	96.147	Equus_asinus_asinus
ENSBTAG00000021195	A1CF	100	96.168	ENSECAG00000010424	A1CF	100	95.645	Equus_caballus
ENSBTAG00000021195	A1CF	85	83.007	ENSEEUG00000000013	A1CF	97	84.163	Erinaceus_europaeus
ENSBTAG00000021195	A1CF	100	77.537	ENSELUG00000003159	a1cf	100	78.203	Esox_lucius
ENSBTAG00000021195	A1CF	100	93.867	ENSFCAG00000011179	A1CF	100	94.037	Felis_catus
ENSBTAG00000021195	A1CF	100	89.054	ENSFALG00000013183	A1CF	100	86.905	Ficedula_albicollis
ENSBTAG00000021195	A1CF	100	95.539	ENSFDAG00000019371	A1CF	100	94.719	Fukomys_damarensis
ENSBTAG00000021195	A1CF	100	71.452	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSBTAG00000021195	A1CF	100	71.942	ENSGMOG00000018943	a1cf	100	70.462	Gadus_morhua
ENSBTAG00000021195	A1CF	94	89.147	ENSGALG00000003765	A1CF	97	86.903	Gallus_gallus
ENSBTAG00000021195	A1CF	100	71.636	ENSGAFG00000014868	a1cf	100	72.167	Gambusia_affinis
ENSBTAG00000021195	A1CF	100	74.194	ENSGACG00000010241	a1cf	100	74.013	Gasterosteus_aculeatus
ENSBTAG00000021195	A1CF	94	88.521	ENSGAGG00000016508	A1CF	97	86.856	Gopherus_agassizii
ENSBTAG00000021195	A1CF	100	95.055	ENSGGOG00000009670	A1CF	100	94.286	Gorilla_gorilla
ENSBTAG00000021195	A1CF	100	77.658	ENSHBUG00000021959	a1cf	100	77.851	Haplochromis_burtoni
ENSBTAG00000021195	A1CF	100	94.689	ENSHGLG00000008955	A1CF	100	94.286	Heterocephalus_glaber_female
ENSBTAG00000021195	A1CF	100	93.956	ENSHGLG00100000518	A1CF	100	93.613	Heterocephalus_glaber_male
ENSBTAG00000021195	A1CF	100	72.389	ENSHCOG00000017669	a1cf	100	72.358	Hippocampus_comes
ENSBTAG00000021195	A1CF	97	81.716	ENSIPUG00000010367	a1cf	95	81.989	Ictalurus_punctatus
ENSBTAG00000021195	A1CF	100	76.423	ENSKMAG00000006568	a1cf	100	77.073	Kryptolebias_marmoratus
ENSBTAG00000021195	A1CF	99	74.790	ENSLBEG00000020994	a1cf	98	75.698	Labrus_bergylta
ENSBTAG00000021195	A1CF	98	84.615	ENSLACG00000008061	A1CF	100	81.895	Latimeria_chalumnae
ENSBTAG00000021195	A1CF	100	81.000	ENSLOCG00000006302	a1cf	100	81.000	Lepisosteus_oculatus
ENSBTAG00000021195	A1CF	100	93.956	ENSLAFG00000015462	A1CF	100	93.109	Loxodonta_africana
ENSBTAG00000021195	A1CF	100	96.468	ENSMFAG00000035948	A1CF	100	95.230	Macaca_fascicularis
ENSBTAG00000021195	A1CF	100	96.468	ENSMMUG00000007077	A1CF	100	95.230	Macaca_mulatta
ENSBTAG00000021195	A1CF	100	96.097	ENSMNEG00000031454	A1CF	100	94.889	Macaca_nemestrina
ENSBTAG00000021195	A1CF	100	93.782	ENSMLEG00000037223	A1CF	100	93.613	Mandrillus_leucophaeus
ENSBTAG00000021195	A1CF	100	76.087	ENSMAMG00000010402	a1cf	100	76.783	Mastacembelus_armatus
ENSBTAG00000021195	A1CF	97	78.424	ENSMZEG00005013245	a1cf	100	75.833	Maylandia_zebra
ENSBTAG00000021195	A1CF	100	89.234	ENSMGAG00000001507	A1CF	100	87.102	Meleagris_gallopavo
ENSBTAG00000021195	A1CF	100	92.491	ENSMAUG00000007422	A1cf	100	92.101	Mesocricetus_auratus
ENSBTAG00000021195	A1CF	100	95.933	ENSMICG00000003377	A1CF	100	94.746	Microcebus_murinus
ENSBTAG00000021195	A1CF	100	93.040	ENSMOCG00000021536	A1cf	100	92.269	Microtus_ochrogaster
ENSBTAG00000021195	A1CF	100	68.657	ENSMMOG00000009422	a1cf	100	70.481	Mola_mola
ENSBTAG00000021195	A1CF	100	90.724	ENSMODG00000016478	A1CF	97	92.131	Monodelphis_domestica
ENSBTAG00000021195	A1CF	99	76.262	ENSMALG00000012992	a1cf	100	72.973	Monopterus_albus
ENSBTAG00000021195	A1CF	100	93.680	MGP_CAROLIEiJ_G0022873	A1cf	100	92.845	Mus_caroli
ENSBTAG00000021195	A1CF	100	93.680	ENSMUSG00000052595	A1cf	99	95.276	Mus_musculus
ENSBTAG00000021195	A1CF	100	92.937	MGP_PahariEiJ_G0014366	A1cf	100	92.164	Mus_pahari
ENSBTAG00000021195	A1CF	100	93.494	MGP_SPRETEiJ_G0023792	A1cf	100	92.504	Mus_spretus
ENSBTAG00000021195	A1CF	100	87.731	ENSMPUG00000016971	A1CF	100	87.731	Mustela_putorius_furo
ENSBTAG00000021195	A1CF	100	94.118	ENSMLUG00000016071	A1CF	100	94.118	Myotis_lucifugus
ENSBTAG00000021195	A1CF	100	93.590	ENSNGAG00000015136	A1cf	100	93.109	Nannospalax_galili
ENSBTAG00000021195	A1CF	100	77.838	ENSNBRG00000001712	a1cf	100	78.182	Neolamprologus_brichardi
ENSBTAG00000021195	A1CF	100	95.788	ENSNLEG00000012028	A1CF	100	95.126	Nomascus_leucogenys
ENSBTAG00000021195	A1CF	94	90.654	ENSMEUG00000015909	A1CF	100	90.090	Notamacropus_eugenii
ENSBTAG00000021195	A1CF	96	82.857	ENSOPRG00000010667	A1CF	97	82.955	Ochotona_princeps
ENSBTAG00000021195	A1CF	100	78.559	ENSONIG00000019105	a1cf	100	77.686	Oreochromis_niloticus
ENSBTAG00000021195	A1CF	85	90.196	ENSOANG00000007360	A1CF	99	90.196	Ornithorhynchus_anatinus
ENSBTAG00000021195	A1CF	100	93.707	ENSOCUG00000011587	A1CF	100	94.048	Oryctolagus_cuniculus
ENSBTAG00000021195	A1CF	99	75.986	ENSORLG00000013342	a1cf	100	73.366	Oryzias_latipes
ENSBTAG00000021195	A1CF	100	76.512	ENSORLG00020000586	a1cf	100	75.204	Oryzias_latipes_hni
ENSBTAG00000021195	A1CF	100	76.335	ENSORLG00015018569	a1cf	100	75.041	Oryzias_latipes_hsok
ENSBTAG00000021195	A1CF	100	78.119	ENSOMEG00000013531	a1cf	100	76.285	Oryzias_melastigma
ENSBTAG00000021195	A1CF	100	92.437	ENSOGAG00000012884	A1CF	100	92.605	Otolemur_garnettii
ENSBTAG00000021195	A1CF	100	97.479	ENSOARG00000013695	A1CF	100	97.479	Ovis_aries
ENSBTAG00000021195	A1CF	97	92.803	ENSPPAG00000028115	A1CF	100	96.154	Pan_paniscus
ENSBTAG00000021195	A1CF	100	92.941	ENSPPRG00000012180	A1CF	100	93.109	Panthera_pardus
ENSBTAG00000021195	A1CF	100	92.941	ENSPTIG00000021223	A1CF	100	93.109	Panthera_tigris_altaica
ENSBTAG00000021195	A1CF	100	96.283	ENSPTRG00000002508	A1CF	100	95.400	Pan_troglodytes
ENSBTAG00000021195	A1CF	100	96.468	ENSPANG00000021988	A1CF	100	95.230	Papio_anubis
ENSBTAG00000021195	A1CF	100	79.700	ENSPKIG00000025176	a1cf	100	79.534	Paramormyrops_kingsleyae
ENSBTAG00000021195	A1CF	100	89.981	ENSPSIG00000010318	A1CF	100	88.095	Pelodiscus_sinensis
ENSBTAG00000021195	A1CF	96	72.147	ENSPMGG00000013359	a1cf	99	68.339	Periophthalmus_magnuspinnatus
ENSBTAG00000021195	A1CF	100	92.857	ENSPEMG00000015021	A1cf	100	92.269	Peromyscus_maniculatus_bairdii
ENSBTAG00000021195	A1CF	100	89.626	ENSPCIG00000002175	A1CF	100	89.626	Phascolarctos_cinereus
ENSBTAG00000021195	A1CF	100	75.244	ENSPFOG00000007437	-	100	76.384	Poecilia_formosa
ENSBTAG00000021195	A1CF	100	75.407	ENSPFOG00000006683	a1cf	100	76.547	Poecilia_formosa
ENSBTAG00000021195	A1CF	100	76.238	ENSPLAG00000001210	-	100	77.393	Poecilia_latipinna
ENSBTAG00000021195	A1CF	100	76.238	ENSPLAG00000000026	a1cf	100	77.393	Poecilia_latipinna
ENSBTAG00000021195	A1CF	100	68.137	ENSPMEG00000015529	-	100	69.281	Poecilia_mexicana
ENSBTAG00000021195	A1CF	100	69.040	ENSPMEG00000000921	a1cf	100	70.199	Poecilia_mexicana
ENSBTAG00000021195	A1CF	100	75.709	ENSPREG00000016298	a1cf	100	76.384	Poecilia_reticulata
ENSBTAG00000021195	A1CF	100	97.026	ENSPPYG00000002819	A1CF	100	96.252	Pongo_abelii
ENSBTAG00000021195	A1CF	79	74.839	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSBTAG00000021195	A1CF	100	95.247	ENSPCOG00000024172	A1CF	100	94.966	Propithecus_coquereli
ENSBTAG00000021195	A1CF	100	76.732	ENSPNYG00000017944	a1cf	100	76.998	Pundamilia_nyererei
ENSBTAG00000021195	A1CF	100	81.376	ENSPNAG00000007704	a1cf	100	81.208	Pygocentrus_nattereri
ENSBTAG00000021195	A1CF	100	93.680	ENSRNOG00000033195	A1cf	100	92.845	Rattus_norvegicus
ENSBTAG00000021195	A1CF	100	87.437	ENSRBIG00000042892	A1CF	100	93.241	Rhinopithecus_bieti
ENSBTAG00000021195	A1CF	100	95.055	ENSRROG00000041398	A1CF	100	93.950	Rhinopithecus_roxellana
ENSBTAG00000021195	A1CF	100	95.788	ENSSBOG00000021930	A1CF	100	95.626	Saimiri_boliviensis_boliviensis
ENSBTAG00000021195	A1CF	100	89.966	ENSSHAG00000005096	A1CF	100	89.966	Sarcophilus_harrisii
ENSBTAG00000021195	A1CF	100	80.672	ENSSFOG00015011774	a1cf	100	81.008	Scleropages_formosus
ENSBTAG00000021195	A1CF	100	74.756	ENSSMAG00000013271	a1cf	100	74.919	Scophthalmus_maximus
ENSBTAG00000021195	A1CF	100	76.673	ENSSDUG00000013930	a1cf	100	75.788	Seriola_dumerili
ENSBTAG00000021195	A1CF	100	70.401	ENSSLDG00000004290	a1cf	100	71.237	Seriola_lalandi_dorsalis
ENSBTAG00000021195	A1CF	95	85.855	ENSSARG00000005940	A1CF	96	85.484	Sorex_araneus
ENSBTAG00000021195	A1CF	93	88.780	ENSSPUG00000006797	A1CF	95	85.413	Sphenodon_punctatus
ENSBTAG00000021195	A1CF	100	96.886	ENSSSCG00000010431	A1CF	100	96.471	Sus_scrofa
ENSBTAG00000021195	A1CF	100	88.300	ENSTGUG00000005090	A1CF	100	85.953	Taeniopygia_guttata
ENSBTAG00000021195	A1CF	100	75.311	ENSTRUG00000001982	a1cf	100	73.899	Takifugu_rubripes
ENSBTAG00000021195	A1CF	100	75.752	ENSTNIG00000003580	a1cf	100	74.146	Tetraodon_nigroviridis
ENSBTAG00000021195	A1CF	97	91.154	ENSTTRG00000013190	A1CF	95	90.685	Tursiops_truncatus
ENSBTAG00000021195	A1CF	100	96.468	ENSUAMG00000020065	A1CF	100	95.741	Ursus_americanus
ENSBTAG00000021195	A1CF	100	93.613	ENSUMAG00000011162	A1CF	100	93.613	Ursus_maritimus
ENSBTAG00000021195	A1CF	82	96.840	ENSVPAG00000006130	A1CF	86	91.618	Vicugna_pacos
ENSBTAG00000021195	A1CF	100	96.283	ENSVVUG00000002504	A1CF	100	95.400	Vulpes_vulpes
ENSBTAG00000021195	A1CF	98	79.298	ENSXETG00000006611	a1cf	100	77.167	Xenopus_tropicalis
ENSBTAG00000021195	A1CF	100	77.741	ENSXCOG00000003302	a1cf	100	78.405	Xiphophorus_couchianus
ENSBTAG00000021195	A1CF	100	76.721	ENSXMAG00000016703	a1cf	100	77.377	Xiphophorus_maculatus