EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000021219 (Gene tree)
Gene ID: 512478
Gene Symbol: SEPT1
Alias: -
Full Name: Bos taurus septin 1 (SEPT1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 3620 bases
Position: chr25:26562037-26565656
Accession: NM_001098947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000028271	MMR_HSR1	PF01926.23	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028271	-	1430	-	ENSBTAP00000028271	367 (aa)	-	A5PJU9

Gene Model

Click here to download ENSBTAG00000021219's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000021219	SEPT1	94	55.942	ENSBTAG00000002608	SEPT2	94	56.354
ENSBTAG00000021219	SEPT1	80	44.595	ENSBTAG00000002633	SEPT9	52	44.595
ENSBTAG00000021219	SEPT1	95	62.824	ENSBTAG00000008320	SEPT5	94	64.345
ENSBTAG00000021219	SEPT1	90	51.360	ENSBTAG00000001182	SEPT7	79	49.711
ENSBTAG00000021219	SEPT1	96	65.266	ENSBTAG00000015368	SEPT4	99	65.266
ENSBTAG00000021219	SEPT1	92	41.399	ENSBTAG00000021372	SEPT11	82	40.608
ENSBTAG00000021219	SEPT1	78	43.403	ENSBTAG00000009327	SEPT14	64	43.403
ENSBTAG00000021219	SEPT1	79	42.612	ENSBTAG00000008609	SEPT8	65	42.612
ENSBTAG00000021219	SEPT1	79	47.260	ENSBTAG00000013173	SEPT3	81	47.260
ENSBTAG00000021219	SEPT1	81	44.966	ENSBTAG00000016330	SEPT12	81	44.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021219	SEPT1	100	97.003	ENSG00000180096	SEPT1	89	97.003	Homo_sapiens
ENSBTAG00000021219	SEPT1	99	95.368	ENSAMEG00000007865	SEPT1	99	95.368	Ailuropoda_melanoleuca
ENSBTAG00000021219	SEPT1	100	96.185	ENSANAG00000029084	SEPT1	100	96.185	Aotus_nancymaae
ENSBTAG00000021219	SEPT1	100	95.368	ENSCJAG00000002577	SEPT1	89	95.368	Callithrix_jacchus
ENSBTAG00000021219	SEPT1	99	96.721	ENSCAFG00000016576	SEPT1	99	96.721	Canis_familiaris
ENSBTAG00000021219	SEPT1	99	96.721	ENSCAFG00020017813	SEPT1	99	96.721	Canis_lupus_dingo
ENSBTAG00000021219	SEPT1	100	97.067	ENSCHIG00000017447	SEPT1	100	97.067	Capra_hircus
ENSBTAG00000021219	SEPT1	100	95.640	ENSTSYG00000035596	SEPT1	100	95.640	Carlito_syrichta
ENSBTAG00000021219	SEPT1	100	74.728	ENSCAPG00000001347	SEPT1	100	74.728	Cavia_aperea
ENSBTAG00000021219	SEPT1	99	92.916	ENSCPOG00000003088	SEPT1	99	92.916	Cavia_porcellus
ENSBTAG00000021219	SEPT1	100	82.289	ENSCCAG00000030164	SEPT1	90	82.289	Cebus_capucinus
ENSBTAG00000021219	SEPT1	100	96.730	ENSCATG00000037250	SEPT1	99	96.730	Cercocebus_atys
ENSBTAG00000021219	SEPT1	99	94.550	ENSCLAG00000010486	SEPT1	100	94.706	Chinchilla_lanigera
ENSBTAG00000021219	SEPT1	100	96.730	ENSCSAG00000006056	SEPT1	99	96.730	Chlorocebus_sabaeus
ENSBTAG00000021219	SEPT1	100	96.458	ENSCANG00000035786	SEPT1	89	96.458	Colobus_angolensis_palliatus
ENSBTAG00000021219	SEPT1	100	94.550	ENSCGRG00001003374	Sept1	100	94.550	Cricetulus_griseus_chok1gshd
ENSBTAG00000021219	SEPT1	100	93.733	ENSCGRG00000004919	Sept1	100	93.733	Cricetulus_griseus_crigri
ENSBTAG00000021219	SEPT1	100	95.368	ENSDNOG00000014680	SEPT1	85	95.368	Dasypus_novemcinctus
ENSBTAG00000021219	SEPT1	100	95.640	ENSDORG00000011443	Sept1	100	95.640	Dipodomys_ordii
ENSBTAG00000021219	SEPT1	92	96.165	ENSEASG00005013153	SEPT1	100	96.165	Equus_asinus_asinus
ENSBTAG00000021219	SEPT1	100	96.458	ENSECAG00000009390	SEPT1	96	96.458	Equus_caballus
ENSBTAG00000021219	SEPT1	100	94.550	ENSEEUG00000007661	SEPT1	100	94.550	Erinaceus_europaeus
ENSBTAG00000021219	SEPT1	100	96.185	ENSFCAG00000013541	SEPT1	94	96.185	Felis_catus
ENSBTAG00000021219	SEPT1	100	75.134	ENSGGOG00000017024	SEPT1	88	75.134	Gorilla_gorilla
ENSBTAG00000021219	SEPT1	100	97.003	ENSSTOG00000002782	SEPT1	100	97.003	Ictidomys_tridecemlineatus
ENSBTAG00000021219	SEPT1	100	94.278	ENSJJAG00000023131	Sept1	100	94.278	Jaculus_jaculus
ENSBTAG00000021219	SEPT1	99	94.536	ENSLAFG00000027789	SEPT1	99	94.536	Loxodonta_africana
ENSBTAG00000021219	SEPT1	100	96.730	ENSMFAG00000031504	SEPT1	89	96.730	Macaca_fascicularis
ENSBTAG00000021219	SEPT1	100	90.191	ENSMMUG00000021842	SEPT1	97	97.050	Macaca_mulatta
ENSBTAG00000021219	SEPT1	100	85.054	ENSMNEG00000041695	SEPT1	89	85.054	Macaca_nemestrina
ENSBTAG00000021219	SEPT1	100	88.011	ENSMLEG00000039481	SEPT1	88	88.011	Mandrillus_leucophaeus
ENSBTAG00000021219	SEPT1	100	95.640	ENSMAUG00000009531	Sept1	100	95.640	Mesocricetus_auratus
ENSBTAG00000021219	SEPT1	99	96.995	ENSMICG00000011817	SEPT1	94	96.995	Microcebus_murinus
ENSBTAG00000021219	SEPT1	100	94.823	ENSMOCG00000017518	Sept1	100	94.823	Microtus_ochrogaster
ENSBTAG00000021219	SEPT1	100	95.095	MGP_CAROLIEiJ_G0030492	Sept1	100	96.552	Mus_caroli
ENSBTAG00000021219	SEPT1	100	95.368	ENSMUSG00000000486	Sept1	100	96.552	Mus_musculus
ENSBTAG00000021219	SEPT1	100	95.095	MGP_PahariEiJ_G0013702	Sept1	100	95.862	Mus_pahari
ENSBTAG00000021219	SEPT1	100	95.095	MGP_SPRETEiJ_G0031606	Sept1	100	95.862	Mus_spretus
ENSBTAG00000021219	SEPT1	99	95.082	ENSMLUG00000006749	SEPT1	99	95.082	Myotis_lucifugus
ENSBTAG00000021219	SEPT1	100	95.368	ENSNGAG00000021368	Sept1	100	95.368	Nannospalax_galili
ENSBTAG00000021219	SEPT1	99	90.164	ENSMEUG00000000492	SEPT1	100	90.164	Notamacropus_eugenii
ENSBTAG00000021219	SEPT1	100	93.188	ENSOPRG00000007981	SEPT1	100	93.188	Ochotona_princeps
ENSBTAG00000021219	SEPT1	100	92.935	ENSODEG00000014531	SEPT1	100	92.935	Octodon_degus
ENSBTAG00000021219	SEPT1	100	87.738	ENSOANG00000005331	SEPT1	100	87.738	Ornithorhynchus_anatinus
ENSBTAG00000021219	SEPT1	99	97.541	ENSOGAG00000013350	SEPT1	99	97.541	Otolemur_garnettii
ENSBTAG00000021219	SEPT1	99	99.185	ENSOARG00000006135	SEPT1	99	99.185	Ovis_aries
ENSBTAG00000021219	SEPT1	100	77.929	ENSPPAG00000032680	SEPT1	87	74.114	Pan_paniscus
ENSBTAG00000021219	SEPT1	99	96.175	ENSPPRG00000008648	-	100	96.175	Panthera_pardus
ENSBTAG00000021219	SEPT1	84	96.104	ENSPTIG00000006718	SEPT1	87	96.104	Panthera_tigris_altaica
ENSBTAG00000021219	SEPT1	100	97.003	ENSPTRG00000007998	SEPT1	89	97.003	Pan_troglodytes
ENSBTAG00000021219	SEPT1	100	88.011	ENSPANG00000032364	SEPT1	99	88.011	Papio_anubis
ENSBTAG00000021219	SEPT1	100	95.095	ENSPEMG00000023616	Sept1	100	95.095	Peromyscus_maniculatus_bairdii
ENSBTAG00000021219	SEPT1	100	90.736	ENSPCIG00000001537	SEPT1	100	90.736	Phascolarctos_cinereus
ENSBTAG00000021219	SEPT1	84	96.104	ENSPPYG00000007270	-	100	96.104	Pongo_abelii
ENSBTAG00000021219	SEPT1	100	93.188	ENSPCAG00000009042	SEPT1	100	93.188	Procavia_capensis
ENSBTAG00000021219	SEPT1	100	97.003	ENSPCOG00000028121	SEPT1	90	97.003	Propithecus_coquereli
ENSBTAG00000021219	SEPT1	100	97.548	ENSPVAG00000008655	SEPT1	100	97.548	Pteropus_vampyrus
ENSBTAG00000021219	SEPT1	100	94.550	ENSRNOG00000017804	Sept1	100	94.550	Rattus_norvegicus
ENSBTAG00000021219	SEPT1	100	96.185	ENSRBIG00000036580	SEPT1	89	96.185	Rhinopithecus_bieti
ENSBTAG00000021219	SEPT1	100	96.185	ENSRROG00000038708	SEPT1	99	96.185	Rhinopithecus_roxellana
ENSBTAG00000021219	SEPT1	100	95.640	ENSSBOG00000021733	SEPT1	89	95.640	Saimiri_boliviensis_boliviensis
ENSBTAG00000021219	SEPT1	99	89.617	ENSSHAG00000006478	SEPT1	99	89.617	Sarcophilus_harrisii
ENSBTAG00000021219	SEPT1	100	97.275	ENSSSCG00000007800	SEPT1	100	97.275	Sus_scrofa
ENSBTAG00000021219	SEPT1	100	97.548	ENSTTRG00000017272	SEPT1	100	97.548	Tursiops_truncatus
ENSBTAG00000021219	SEPT1	100	97.548	ENSUAMG00000027438	SEPT1	99	97.275	Ursus_americanus
ENSBTAG00000021219	SEPT1	100	97.548	ENSUMAG00000011345	SEPT1	100	97.548	Ursus_maritimus
ENSBTAG00000021219	SEPT1	92	96.131	ENSVVUG00000026116	SEPT1	90	96.131	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0005815	microtubule organizing center	-	IEA	Component
GO:0007056	spindle assembly involved in female meiosis	-	IEA	Process
GO:0030496	midbody	-	IEA	Component
GO:0051311	meiotic metaphase plate congression	-	IEA	Process
GO:0072687	meiotic spindle	-	IEA	Component