EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000021253 (Gene tree)
Gene ID: 514566
Gene Symbol: PRDM15
Alias: -
Full Name: PR/SET domain 15
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 66881 bases
Position: chr1:142065605-142132485
Accession: 33293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000028324	zf-C2H2	PF00096.26	2.3e-47	1	5
ENSBTAP00000028324	zf-C2H2	PF00096.26	2.3e-47	2	5
ENSBTAP00000028324	zf-C2H2	PF00096.26	2.3e-47	3	5
ENSBTAP00000028324	zf-C2H2	PF00096.26	2.3e-47	4	5
ENSBTAP00000028324	zf-C2H2	PF00096.26	2.3e-47	5	5
ENSBTAP00000064196	zf-C2H2	PF00096.26	2.3e-47	1	5
ENSBTAP00000064196	zf-C2H2	PF00096.26	2.3e-47	2	5
ENSBTAP00000064196	zf-C2H2	PF00096.26	2.3e-47	3	5
ENSBTAP00000064196	zf-C2H2	PF00096.26	2.3e-47	4	5
ENSBTAP00000064196	zf-C2H2	PF00096.26	2.3e-47	5	5
ENSBTAP00000056120	zf-C2H2	PF00096.26	4.6e-44	1	5
ENSBTAP00000056120	zf-C2H2	PF00096.26	4.6e-44	2	5
ENSBTAP00000056120	zf-C2H2	PF00096.26	4.6e-44	3	5
ENSBTAP00000056120	zf-C2H2	PF00096.26	4.6e-44	4	5
ENSBTAP00000056120	zf-C2H2	PF00096.26	4.6e-44	5	5
ENSBTAP00000028324	zf-met	PF12874.7	5.6e-15	1	1
ENSBTAP00000064196	zf-met	PF12874.7	5.6e-15	1	1
ENSBTAP00000056120	zf-met	PF12874.7	1.9e-14	1	2
ENSBTAP00000056120	zf-met	PF12874.7	1.9e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028324	-	5434	-	ENSBTAP00000028324	1135 (aa)	-	E1BEG7
ENSBTAT00000065278	-	5247	-	ENSBTAP00000056120	1074 (aa)	-	G3N2K5
ENSBTAT00000069342	-	6306	-	ENSBTAP00000064196	1135 (aa)	-	UPI00022643B5

Gene Model

Click here to download ENSBTAG00000021253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000021253	PRDM15	55	37.500	ENSBTAG00000017517	ZNF236	61	35.185
ENSBTAG00000021253	PRDM15	61	32.571	ENSBTAG00000000060	PRDM14	56	32.571
ENSBTAG00000021253	PRDM15	53	36.481	ENSBTAG00000038869	ZNF383	96	36.052
ENSBTAG00000021253	PRDM15	50	35.874	ENSBTAG00000000868	ZFP1	82	35.874
ENSBTAG00000021253	PRDM15	62	31.818	ENSBTAG00000012999	PRDM4	51	32.727
ENSBTAG00000021253	PRDM15	51	32.015	ENSBTAG00000038088	-	99	30.470
ENSBTAG00000021253	PRDM15	52	35.169	ENSBTAG00000032018	ZNF19	77	35.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021253	PRDM15	93	61.998	ENSAPOG00000001891	PRDM15	94	62.430	Acanthochromis_polyacanthus
ENSBTAG00000021253	PRDM15	98	97.727	ENSAMEG00000002162	PRDM15	94	97.727	Ailuropoda_melanoleuca
ENSBTAG00000021253	PRDM15	99	58.168	ENSACIG00000004096	PRDM15	95	59.610	Amphilophus_citrinellus
ENSBTAG00000021253	PRDM15	98	62.057	ENSAOCG00000015241	PRDM15	95	63.309	Amphiprion_ocellaris
ENSBTAG00000021253	PRDM15	98	62.222	ENSAPEG00000016305	PRDM15	95	61.733	Amphiprion_percula
ENSBTAG00000021253	PRDM15	99	58.261	ENSATEG00000003481	PRDM15	96	61.812	Anabas_testudineus
ENSBTAG00000021253	PRDM15	97	83.903	ENSAPLG00000001239	PRDM15	100	82.910	Anas_platyrhynchos
ENSBTAG00000021253	PRDM15	83	69.134	ENSACLG00000026541	PRDM15	87	71.503	Astatotilapia_calliptera
ENSBTAG00000021253	PRDM15	98	61.896	ENSAMXG00000008771	PRDM15	94	62.466	Astyanax_mexicanus
ENSBTAG00000021253	PRDM15	97	91.530	ENSCJAG00000013815	PRDM15	98	87.172	Callithrix_jacchus
ENSBTAG00000021253	PRDM15	97	93.243	ENSCAFG00000010223	PRDM15	100	92.368	Canis_familiaris
ENSBTAG00000021253	PRDM15	100	96.588	ENSCHIG00000016222	PRDM15	99	96.588	Capra_hircus
ENSBTAG00000021253	PRDM15	97	92.259	ENSTSYG00000011542	PRDM15	100	91.411	Carlito_syrichta
ENSBTAG00000021253	PRDM15	97	91.300	ENSCCAG00000030489	PRDM15	100	92.929	Cebus_capucinus
ENSBTAG00000021253	PRDM15	97	83.813	ENSCPBG00000012917	PRDM15	98	82.997	Chrysemys_picta_bellii
ENSBTAG00000021253	PRDM15	81	68.970	ENSCSEG00000013102	PRDM15	97	59.947	Cynoglossus_semilaevis
ENSBTAG00000021253	PRDM15	83	73.377	ENSDARG00000098867	PRDM15	99	59.982	Danio_rerio
ENSBTAG00000021253	PRDM15	97	80.665	ENSDNOG00000033954	PRDM15	97	80.123	Dasypus_novemcinctus
ENSBTAG00000021253	PRDM15	66	50.596	ENSEBUG00000014968	PRDM15	69	50.596	Eptatretus_burgeri
ENSBTAG00000021253	PRDM15	100	92.713	ENSEASG00005003891	PRDM15	100	92.625	Equus_asinus_asinus
ENSBTAG00000021253	PRDM15	100	92.537	ENSECAG00000017225	PRDM15	98	92.450	Equus_caballus
ENSBTAG00000021253	PRDM15	99	62.599	ENSELUG00000023702	PRDM15	96	62.825	Esox_lucius
ENSBTAG00000021253	PRDM15	86	90.239	ENSFCAG00000012695	PRDM15	88	90.239	Felis_catus
ENSBTAG00000021253	PRDM15	97	79.844	ENSFALG00000002064	PRDM15	100	79.174	Ficedula_albicollis
ENSBTAG00000021253	PRDM15	81	71.335	ENSFHEG00000015074	PRDM15	96	59.760	Fundulus_heteroclitus
ENSBTAG00000021253	PRDM15	75	71.348	ENSGMOG00000012203	PRDM15	82	71.348	Gadus_morhua
ENSBTAG00000021253	PRDM15	97	80.260	ENSGALG00000019178	PRDM15	100	79.476	Gallus_gallus
ENSBTAG00000021253	PRDM15	68	68.957	ENSGAFG00000015673	PRDM15	96	61.781	Gambusia_affinis
ENSBTAG00000021253	PRDM15	98	59.492	ENSGACG00000020205	PRDM15	97	61.145	Gasterosteus_aculeatus
ENSBTAG00000021253	PRDM15	100	83.319	ENSGAGG00000022082	PRDM15	100	83.319	Gopherus_agassizii
ENSBTAG00000021253	PRDM15	89	67.262	ENSHBUG00000018577	PRDM15	91	67.145	Haplochromis_burtoni
ENSBTAG00000021253	PRDM15	98	60.873	ENSHCOG00000000365	PRDM15	96	61.052	Hippocampus_comes
ENSBTAG00000021253	PRDM15	100	59.441	ENSKMAG00000010411	PRDM15	96	61.613	Kryptolebias_marmoratus
ENSBTAG00000021253	PRDM15	82	69.114	ENSLBEG00000013197	PRDM15	95	67.394	Labrus_bergylta
ENSBTAG00000021253	PRDM15	98	63.345	ENSLACG00000016206	PRDM15	97	63.502	Latimeria_chalumnae
ENSBTAG00000021253	PRDM15	95	65.032	ENSLOCG00000004600	PRDM15	95	65.533	Lepisosteus_oculatus
ENSBTAG00000021253	PRDM15	100	89.869	ENSLAFG00000008866	PRDM15	100	89.782	Loxodonta_africana
ENSBTAG00000021253	PRDM15	85	69.542	ENSMAMG00000004457	PRDM15	92	70.745	Mastacembelus_armatus
ENSBTAG00000021253	PRDM15	99	60.791	ENSMZEG00005022947	PRDM15	87	71.503	Maylandia_zebra
ENSBTAG00000021253	PRDM15	97	80.423	ENSMGAG00000014568	PRDM15	99	79.320	Meleagris_gallopavo
ENSBTAG00000021253	PRDM15	100	90.026	ENSMICG00000013783	PRDM15	100	89.939	Microcebus_murinus
ENSBTAG00000021253	PRDM15	88	66.624	ENSMMOG00000005844	PRDM15	95	67.763	Mola_mola
ENSBTAG00000021253	PRDM15	97	82.242	ENSMODG00000020959	PRDM15	97	82.242	Monodelphis_domestica
ENSBTAG00000021253	PRDM15	99	60.172	ENSMALG00000002361	PRDM15	93	61.484	Monopterus_albus
ENSBTAG00000021253	PRDM15	90	91.699	ENSMPUG00000008938	PRDM15	100	91.602	Mustela_putorius_furo
ENSBTAG00000021253	PRDM15	100	97.727	ENSMLUG00000001078	PRDM15	95	97.727	Myotis_lucifugus
ENSBTAG00000021253	PRDM15	88	69.048	ENSNBRG00000018449	PRDM15	96	62.189	Neolamprologus_brichardi
ENSBTAG00000021253	PRDM15	100	79.545	ENSONIG00000011354	PRDM15	91	79.545	Oreochromis_niloticus
ENSBTAG00000021253	PRDM15	97	83.936	ENSOANG00000006445	PRDM15	99	83.936	Ornithorhynchus_anatinus
ENSBTAG00000021253	PRDM15	98	62.011	ENSORLG00000012533	PRDM15	95	62.212	Oryzias_latipes
ENSBTAG00000021253	PRDM15	100	60.102	ENSORLG00020014595	PRDM15	96	61.913	Oryzias_latipes_hni
ENSBTAG00000021253	PRDM15	100	60.511	ENSORLG00015021496	PRDM15	96	62.234	Oryzias_latipes_hsok
ENSBTAG00000021253	PRDM15	100	90.455	ENSOGAG00000006444	PRDM15	100	90.368	Otolemur_garnettii
ENSBTAG00000021253	PRDM15	100	96.828	ENSOARG00000010468	PRDM15	100	96.828	Ovis_aries
ENSBTAG00000021253	PRDM15	97	92.633	ENSPPRG00000007591	PRDM15	100	91.689	Panthera_pardus
ENSBTAG00000021253	PRDM15	97	91.837	ENSPTIG00000019585	-	68	88.235	Panthera_tigris_altaica
ENSBTAG00000021253	PRDM15	89	69.146	ENSPKIG00000020637	PRDM15	90	71.429	Paramormyrops_kingsleyae
ENSBTAG00000021253	PRDM15	97	83.662	ENSPSIG00000006944	PRDM15	100	82.765	Pelodiscus_sinensis
ENSBTAG00000021253	PRDM15	85	69.456	ENSPMGG00000003004	PRDM15	100	69.854	Periophthalmus_magnuspinnatus
ENSBTAG00000021253	PRDM15	78	55.978	ENSPMAG00000009794	PRDM15	100	69.651	Petromyzon_marinus
ENSBTAG00000021253	PRDM15	97	84.158	ENSPCIG00000011005	PRDM15	100	83.158	Phascolarctos_cinereus
ENSBTAG00000021253	PRDM15	82	69.066	ENSPFOG00000014213	PRDM15	94	58.089	Poecilia_formosa
ENSBTAG00000021253	PRDM15	67	69.744	ENSPLAG00000016134	PRDM15	96	62.100	Poecilia_latipinna
ENSBTAG00000021253	PRDM15	67	69.744	ENSPMEG00000014510	PRDM15	91	61.926	Poecilia_mexicana
ENSBTAG00000021253	PRDM15	97	59.787	ENSPREG00000009745	PRDM15	94	61.655	Poecilia_reticulata
ENSBTAG00000021253	PRDM15	92	89.500	ENSPCAG00000009651	PRDM15	65	91.803	Procavia_capensis
ENSBTAG00000021253	PRDM15	97	91.089	ENSPCOG00000017473	PRDM15	99	90.447	Propithecus_coquereli
ENSBTAG00000021253	PRDM15	82	70.270	ENSPNYG00000022279	PRDM15	98	59.314	Pundamilia_nyererei
ENSBTAG00000021253	PRDM15	84	80.187	ENSPNAG00000021304	PRDM15	89	68.305	Pygocentrus_nattereri
ENSBTAG00000021253	PRDM15	71	89.122	ENSSHAG00000002844	-	100	89.122	Sarcophilus_harrisii
ENSBTAG00000021253	PRDM15	86	70.935	ENSSFOG00015013930	PRDM15	95	72.884	Scleropages_formosus
ENSBTAG00000021253	PRDM15	67	70.528	ENSSMAG00000001190	PRDM15	96	62.224	Scophthalmus_maximus
ENSBTAG00000021253	PRDM15	67	71.429	ENSSDUG00000018835	PRDM15	98	62.801	Seriola_dumerili
ENSBTAG00000021253	PRDM15	82	70.769	ENSSLDG00000004428	PRDM15	95	62.658	Seriola_lalandi_dorsalis
ENSBTAG00000021253	PRDM15	99	83.245	ENSSPUG00000013355	PRDM15	99	83.422	Sphenodon_punctatus
ENSBTAG00000021253	PRDM15	99	61.376	ENSSPAG00000010791	PRDM15	96	62.689	Stegastes_partitus
ENSBTAG00000021253	PRDM15	97	93.995	ENSSSCG00000012084	PRDM15	98	94.236	Sus_scrofa
ENSBTAG00000021253	PRDM15	97	82.406	ENSTGUG00000005437	PRDM15	100	81.659	Taeniopygia_guttata
ENSBTAG00000021253	PRDM15	89	58.546	ENSTRUG00000001452	PRDM15	96	59.000	Takifugu_rubripes
ENSBTAG00000021253	PRDM15	86	69.186	ENSTNIG00000004148	-	97	60.214	Tetraodon_nigroviridis
ENSBTAG00000021253	PRDM15	71	65.333	ENSTNIG00000008583	PRDM15	97	61.299	Tetraodon_nigroviridis
ENSBTAG00000021253	PRDM15	75	96.980	ENSTBEG00000004174	-	54	96.980	Tupaia_belangeri
ENSBTAG00000021253	PRDM15	100	100.000	ENSTTRG00000012632	PRDM15	85	100.000	Tursiops_truncatus
ENSBTAG00000021253	PRDM15	97	92.812	ENSVVUG00000016527	PRDM15	100	91.951	Vulpes_vulpes
ENSBTAG00000021253	PRDM15	68	68.996	ENSXMAG00000013849	PRDM15	96	61.614	Xiphophorus_maculatus