EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000021293 (Gene tree)
Gene ID: 515588
Gene Symbol: SNUPN
Alias: -
Full Name: Bos taurus snurportin 1 (SNUPN)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 17500 bases
Position: chr21:33274068-33291567
Accession: NM_001038546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000028371	Snurportin1	PF11538.8	1.4e-17	1	1
ENSBTAP00000067932	Snurportin1	PF11538.8	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028371	-	1395	XM_024981761	ENSBTAP00000028371	362 (aa)	XP_010815368	Q2TBK8
ENSBTAT00000076267	-	2017	-	ENSBTAP00000067932	362 (aa)	XP_010815368	UPI0000618FE3

Gene Model

Click here to download ENSBTAG00000021293's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021293	SNUPN	100	88.950	ENSG00000169371	SNUPN	100	95.238	Homo_sapiens
ENSBTAG00000021293	SNUPN	96	65.833	ENSAPOG00000016953	snupn	95	65.374	Acanthochromis_polyacanthus
ENSBTAG00000021293	SNUPN	100	90.608	ENSAMEG00000008291	SNUPN	99	90.608	Ailuropoda_melanoleuca
ENSBTAG00000021293	SNUPN	95	65.169	ENSACIG00000012409	snupn	94	64.326	Amphilophus_citrinellus
ENSBTAG00000021293	SNUPN	97	65.110	ENSAOCG00000018096	snupn	96	64.384	Amphiprion_ocellaris
ENSBTAG00000021293	SNUPN	96	65.556	ENSAPEG00000008834	snupn	95	64.543	Amphiprion_percula
ENSBTAG00000021293	SNUPN	96	65.374	ENSATEG00000021019	snupn	95	65.556	Anabas_testudineus
ENSBTAG00000021293	SNUPN	100	87.569	ENSANAG00000025568	SNUPN	100	88.122	Aotus_nancymaae
ENSBTAG00000021293	SNUPN	96	63.056	ENSACLG00000025155	snupn	95	63.889	Astatotilapia_calliptera
ENSBTAG00000021293	SNUPN	95	67.042	ENSAMXG00000038311	snupn	96	66.479	Astyanax_mexicanus
ENSBTAG00000021293	SNUPN	86	41.720	WBGene00017746	F23F1.5	93	41.720	Caenorhabditis_elegans
ENSBTAG00000021293	SNUPN	100	87.845	ENSCJAG00000003005	SNUPN	100	88.398	Callithrix_jacchus
ENSBTAG00000021293	SNUPN	100	87.017	ENSCAFG00000018035	SNUPN	100	87.017	Canis_familiaris
ENSBTAG00000021293	SNUPN	100	96.961	ENSCHIG00000018047	SNUPN	100	96.961	Capra_hircus
ENSBTAG00000021293	SNUPN	100	87.293	ENSTSYG00000037224	SNUPN	100	87.845	Carlito_syrichta
ENSBTAG00000021293	SNUPN	95	75.000	ENSCAPG00000005061	SNUPN	100	72.928	Cavia_aperea
ENSBTAG00000021293	SNUPN	95	88.372	ENSCPOG00000034772	SNUPN	100	85.635	Cavia_porcellus
ENSBTAG00000021293	SNUPN	100	87.845	ENSCCAG00000016169	-	100	88.398	Cebus_capucinus
ENSBTAG00000021293	SNUPN	100	88.950	ENSCATG00000039783	SNUPN	100	89.503	Cercocebus_atys
ENSBTAG00000021293	SNUPN	95	87.464	ENSCLAG00000016968	SNUPN	100	85.635	Chinchilla_lanigera
ENSBTAG00000021293	SNUPN	100	87.293	ENSCSAG00000019246	-	100	87.845	Chlorocebus_sabaeus
ENSBTAG00000021293	SNUPN	100	88.398	ENSCSAG00000014576	-	89	88.950	Chlorocebus_sabaeus
ENSBTAG00000021293	SNUPN	100	68.232	ENSCHOG00000005403	SNUPN	100	68.232	Choloepus_hoffmanni
ENSBTAG00000021293	SNUPN	98	80.899	ENSCPBG00000022172	SNUPN	92	80.899	Chrysemys_picta_bellii
ENSBTAG00000021293	SNUPN	100	88.950	ENSCANG00000029707	SNUPN	100	89.503	Colobus_angolensis_palliatus
ENSBTAG00000021293	SNUPN	100	88.122	ENSCGRG00001004622	Snupn	100	87.845	Cricetulus_griseus_chok1gshd
ENSBTAG00000021293	SNUPN	100	88.122	ENSCGRG00000002515	Snupn	100	87.845	Cricetulus_griseus_crigri
ENSBTAG00000021293	SNUPN	95	62.465	ENSCSEG00000003160	snupn	84	61.732	Cynoglossus_semilaevis
ENSBTAG00000021293	SNUPN	95	64.225	ENSCVAG00000010502	snupn	94	63.944	Cyprinodon_variegatus
ENSBTAG00000021293	SNUPN	99	63.144	ENSDARG00000008395	snupn	99	63.144	Danio_rerio
ENSBTAG00000021293	SNUPN	100	85.912	ENSDNOG00000044304	SNUPN	94	85.912	Dasypus_novemcinctus
ENSBTAG00000021293	SNUPN	100	89.227	ENSDORG00000009051	Snupn	100	89.227	Dipodomys_ordii
ENSBTAG00000021293	SNUPN	100	71.350	ENSETEG00000013792	SNUPN	100	71.350	Echinops_telfairi
ENSBTAG00000021293	SNUPN	95	54.648	ENSEBUG00000006682	snupn	93	54.366	Eptatretus_burgeri
ENSBTAG00000021293	SNUPN	100	89.779	ENSEASG00005015697	SNUPN	97	90.331	Equus_asinus_asinus
ENSBTAG00000021293	SNUPN	100	89.779	ENSECAG00000017726	SNUPN	100	90.331	Equus_caballus
ENSBTAG00000021293	SNUPN	70	86.982	ENSEEUG00000000981	-	70	88.166	Erinaceus_europaeus
ENSBTAG00000021293	SNUPN	95	65.896	ENSELUG00000023305	snupn	93	65.896	Esox_lucius
ENSBTAG00000021293	SNUPN	100	89.779	ENSFCAG00000040981	SNUPN	100	89.779	Felis_catus
ENSBTAG00000021293	SNUPN	100	86.740	ENSFDAG00000011599	SNUPN	100	86.188	Fukomys_damarensis
ENSBTAG00000021293	SNUPN	96	64.444	ENSFHEG00000017627	snupn	95	63.611	Fundulus_heteroclitus
ENSBTAG00000021293	SNUPN	95	63.380	ENSGMOG00000009272	snupn	100	63.764	Gadus_morhua
ENSBTAG00000021293	SNUPN	95	71.060	ENSGALG00000029537	SNUPN	100	69.755	Gallus_gallus
ENSBTAG00000021293	SNUPN	96	65.000	ENSGAFG00000004954	snupn	95	64.167	Gambusia_affinis
ENSBTAG00000021293	SNUPN	95	67.232	ENSGACG00000007450	snupn	100	65.819	Gasterosteus_aculeatus
ENSBTAG00000021293	SNUPN	95	81.089	ENSGAGG00000022470	SNUPN	95	81.375	Gopherus_agassizii
ENSBTAG00000021293	SNUPN	64	86.335	ENSGGOG00000004581	-	100	86.335	Gorilla_gorilla
ENSBTAG00000021293	SNUPN	96	64.444	ENSHBUG00000006950	snupn	95	63.889	Haplochromis_burtoni
ENSBTAG00000021293	SNUPN	100	84.530	ENSHGLG00000000536	SNUPN	100	85.083	Heterocephalus_glaber_female
ENSBTAG00000021293	SNUPN	100	84.530	ENSHGLG00100016161	SNUPN	100	85.083	Heterocephalus_glaber_male
ENSBTAG00000021293	SNUPN	100	62.533	ENSHCOG00000007262	snupn	99	63.061	Hippocampus_comes
ENSBTAG00000021293	SNUPN	96	64.246	ENSIPUG00000014460	Snupn	97	64.804	Ictalurus_punctatus
ENSBTAG00000021293	SNUPN	100	88.950	ENSSTOG00000005904	SNUPN	100	89.503	Ictidomys_tridecemlineatus
ENSBTAG00000021293	SNUPN	95	62.040	ENSKMAG00000009957	snupn	97	61.035	Kryptolebias_marmoratus
ENSBTAG00000021293	SNUPN	95	64.820	ENSLBEG00000020694	snupn	94	64.365	Labrus_bergylta
ENSBTAG00000021293	SNUPN	95	70.115	ENSLACG00000015801	SNUPN	96	71.264	Latimeria_chalumnae
ENSBTAG00000021293	SNUPN	95	66.952	ENSLOCG00000015064	snupn	95	66.952	Lepisosteus_oculatus
ENSBTAG00000021293	SNUPN	100	90.331	ENSLAFG00000004422	SNUPN	100	90.331	Loxodonta_africana
ENSBTAG00000021293	SNUPN	88	90.625	ENSMFAG00000003706	SNUPN	100	90.625	Macaca_fascicularis
ENSBTAG00000021293	SNUPN	100	89.227	ENSMMUG00000004784	SNUPN	100	89.779	Macaca_mulatta
ENSBTAG00000021293	SNUPN	100	82.320	ENSMLEG00000041966	SNUPN	100	82.320	Mandrillus_leucophaeus
ENSBTAG00000021293	SNUPN	96	66.667	ENSMAMG00000023109	snupn	95	65.374	Mastacembelus_armatus
ENSBTAG00000021293	SNUPN	96	63.333	ENSMZEG00005010806	snupn	95	64.167	Maylandia_zebra
ENSBTAG00000021293	SNUPN	100	88.398	ENSMAUG00000020426	Snupn	100	88.122	Mesocricetus_auratus
ENSBTAG00000021293	SNUPN	100	88.950	ENSMICG00000016438	SNUPN	100	88.674	Microcebus_murinus
ENSBTAG00000021293	SNUPN	100	89.227	ENSMOCG00000014238	Snupn	100	88.398	Microtus_ochrogaster
ENSBTAG00000021293	SNUPN	99	63.228	ENSMMOG00000001321	snupn	99	62.698	Mola_mola
ENSBTAG00000021293	SNUPN	100	81.250	ENSMODG00000008852	SNUPN	100	80.978	Monodelphis_domestica
ENSBTAG00000021293	SNUPN	95	66.856	ENSMALG00000015058	snupn	94	66.572	Monopterus_albus
ENSBTAG00000021293	SNUPN	100	88.950	MGP_CAROLIEiJ_G0032259	Snupn	100	88.950	Mus_caroli
ENSBTAG00000021293	SNUPN	100	88.674	ENSMUSG00000055334	Snupn	100	88.674	Mus_musculus
ENSBTAG00000021293	SNUPN	100	89.779	MGP_PahariEiJ_G0015126	Snupn	100	89.779	Mus_pahari
ENSBTAG00000021293	SNUPN	100	88.674	MGP_SPRETEiJ_G0033399	Snupn	100	88.674	Mus_spretus
ENSBTAG00000021293	SNUPN	100	88.398	ENSMPUG00000017324	SNUPN	100	88.398	Mustela_putorius_furo
ENSBTAG00000021293	SNUPN	100	72.629	ENSMLUG00000000038	-	100	74.063	Myotis_lucifugus
ENSBTAG00000021293	SNUPN	100	86.226	ENSMLUG00000027517	-	100	85.950	Myotis_lucifugus
ENSBTAG00000021293	SNUPN	100	81.818	ENSMLUG00000027485	-	100	81.543	Myotis_lucifugus
ENSBTAG00000021293	SNUPN	100	87.293	ENSNGAG00000018735	Snupn	100	87.293	Nannospalax_galili
ENSBTAG00000021293	SNUPN	96	65.000	ENSNBRG00000017919	snupn	95	64.722	Neolamprologus_brichardi
ENSBTAG00000021293	SNUPN	71	94.444	ENSNLEG00000035240	-	83	94.444	Nomascus_leucogenys
ENSBTAG00000021293	SNUPN	100	73.204	ENSOPRG00000015889	-	100	73.204	Ochotona_princeps
ENSBTAG00000021293	SNUPN	89	74.845	ENSODEG00000014491	SNUPN	100	72.727	Octodon_degus
ENSBTAG00000021293	SNUPN	95	65.730	ENSONIG00000012855	snupn	96	65.169	Oreochromis_niloticus
ENSBTAG00000021293	SNUPN	99	87.222	ENSOCUG00000008801	SNUPN	99	87.222	Oryctolagus_cuniculus
ENSBTAG00000021293	SNUPN	96	65.278	ENSORLG00000001836	snupn	95	65.833	Oryzias_latipes
ENSBTAG00000021293	SNUPN	96	65.833	ENSORLG00020021175	snupn	95	65.833	Oryzias_latipes_hni
ENSBTAG00000021293	SNUPN	96	66.111	ENSORLG00015014444	snupn	94	66.111	Oryzias_latipes_hsok
ENSBTAG00000021293	SNUPN	96	68.091	ENSOMEG00000004853	snupn	95	67.422	Oryzias_melastigma
ENSBTAG00000021293	SNUPN	100	85.124	ENSOGAG00000004915	SNUPN	100	85.675	Otolemur_garnettii
ENSBTAG00000021293	SNUPN	100	97.514	ENSOARG00000001991	SNUPN	97	97.514	Ovis_aries
ENSBTAG00000021293	SNUPN	100	88.950	ENSPPAG00000034351	SNUPN	100	88.674	Pan_paniscus
ENSBTAG00000021293	SNUPN	100	90.055	ENSPPRG00000023192	SNUPN	100	90.055	Panthera_pardus
ENSBTAG00000021293	SNUPN	100	90.055	ENSPTIG00000003528	SNUPN	100	90.055	Panthera_tigris_altaica
ENSBTAG00000021293	SNUPN	100	89.227	ENSPTRG00000007302	SNUPN	100	88.950	Pan_troglodytes
ENSBTAG00000021293	SNUPN	100	79.558	ENSPANG00000034514	SNUPN	100	80.110	Papio_anubis
ENSBTAG00000021293	SNUPN	98	63.585	ENSPKIG00000012444	snupn	99	64.706	Paramormyrops_kingsleyae
ENSBTAG00000021293	SNUPN	100	77.869	ENSPSIG00000015229	SNUPN	100	77.596	Pelodiscus_sinensis
ENSBTAG00000021293	SNUPN	98	63.807	ENSPMGG00000023843	snupn	98	63.807	Periophthalmus_magnuspinnatus
ENSBTAG00000021293	SNUPN	100	82.597	ENSPCIG00000007854	SNUPN	100	82.320	Phascolarctos_cinereus
ENSBTAG00000021293	SNUPN	96	63.966	ENSPFOG00000014221	snupn	94	64.067	Poecilia_formosa
ENSBTAG00000021293	SNUPN	96	64.246	ENSPLAG00000002339	snupn	94	64.345	Poecilia_latipinna
ENSBTAG00000021293	SNUPN	96	63.966	ENSPMEG00000012436	snupn	94	64.067	Poecilia_mexicana
ENSBTAG00000021293	SNUPN	96	64.246	ENSPREG00000012683	snupn	94	64.624	Poecilia_reticulata
ENSBTAG00000021293	SNUPN	100	80.110	ENSPPYG00000006663	SNUPN	100	79.834	Pongo_abelii
ENSBTAG00000021293	SNUPN	100	87.845	ENSPCOG00000025482	SNUPN	100	88.122	Propithecus_coquereli
ENSBTAG00000021293	SNUPN	100	88.398	ENSPVAG00000010035	SNUPN	100	87.845	Pteropus_vampyrus
ENSBTAG00000021293	SNUPN	96	64.444	ENSPNYG00000008752	snupn	95	63.889	Pundamilia_nyererei
ENSBTAG00000021293	SNUPN	95	67.705	ENSPNAG00000026875	snupn	96	66.572	Pygocentrus_nattereri
ENSBTAG00000021293	SNUPN	100	88.950	ENSRNOG00000005426	Snupn	100	88.950	Rattus_norvegicus
ENSBTAG00000021293	SNUPN	100	88.950	ENSRBIG00000038665	SNUPN	100	89.503	Rhinopithecus_bieti
ENSBTAG00000021293	SNUPN	100	89.227	ENSRROG00000043625	SNUPN	100	89.779	Rhinopithecus_roxellana
ENSBTAG00000021293	SNUPN	100	87.293	ENSSBOG00000029086	-	100	87.845	Saimiri_boliviensis_boliviensis
ENSBTAG00000021293	SNUPN	89	70.062	ENSSFOG00015022264	snupn	67	69.753	Scleropages_formosus
ENSBTAG00000021293	SNUPN	96	67.908	ENSSMAG00000005485	snupn	95	67.908	Scophthalmus_maximus
ENSBTAG00000021293	SNUPN	96	66.944	ENSSDUG00000023461	snupn	95	65.374	Seriola_dumerili
ENSBTAG00000021293	SNUPN	96	67.131	ENSSLDG00000001425	snupn	95	65.556	Seriola_lalandi_dorsalis
ENSBTAG00000021293	SNUPN	100	69.780	ENSSARG00000005585	SNUPN	100	70.330	Sorex_araneus
ENSBTAG00000021293	SNUPN	99	74.462	ENSSPUG00000014331	SNUPN	99	74.462	Sphenodon_punctatus
ENSBTAG00000021293	SNUPN	95	66.854	ENSSPAG00000001216	snupn	94	65.266	Stegastes_partitus
ENSBTAG00000021293	SNUPN	100	90.608	ENSSSCG00000001877	SNUPN	100	90.608	Sus_scrofa
ENSBTAG00000021293	SNUPN	95	66.292	ENSTRUG00000016085	snupn	92	65.730	Takifugu_rubripes
ENSBTAG00000021293	SNUPN	94	58.046	ENSTNIG00000008456	snupn	100	58.908	Tetraodon_nigroviridis
ENSBTAG00000021293	SNUPN	100	84.254	ENSTBEG00000002434	SNUPN	100	83.702	Tupaia_belangeri
ENSBTAG00000021293	SNUPN	100	85.083	ENSTTRG00000011484	SNUPN	100	85.083	Tursiops_truncatus
ENSBTAG00000021293	SNUPN	100	90.608	ENSUAMG00000022723	SNUPN	100	90.608	Ursus_americanus
ENSBTAG00000021293	SNUPN	100	90.884	ENSUMAG00000003738	SNUPN	100	90.884	Ursus_maritimus
ENSBTAG00000021293	SNUPN	100	87.017	ENSVVUG00000019574	SNUPN	100	87.017	Vulpes_vulpes
ENSBTAG00000021293	SNUPN	95	69.914	ENSXETG00000015280	snupn	99	70.201	Xenopus_tropicalis
ENSBTAG00000021293	SNUPN	96	64.525	ENSXMAG00000006634	snupn	95	64.624	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006606	protein import into nucleus	-	IEA	Process
GO:0061015	snRNA import into nucleus	-	IEA	Process
GO:0061608	nuclear import signal receptor activity	-	IEA	Function