EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000021525 (Gene tree)
Gene ID: 514286
Gene Symbol: -
Alias: MGC45806
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1359 bases
Position: chr2:124841943-124843301
Accession: 514286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000028686	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028686	-	713	-	ENSBTAP00000028686	220 (aa)	XP_002685729	F1MX39

Gene Model

Click here to download ENSBTAG00000021525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000021525	-	84	34.555	ENSBTAG00000000905	RAB6B	88	34.555
ENSBTAG00000021525	-	80	37.640	ENSBTAG00000009871	RAB18	72	37.640
ENSBTAG00000021525	-	77	43.605	ENSBTAG00000017604	RAB13	79	43.605
ENSBTAG00000021525	-	93	35.122	ENSBTAG00000006982	RAB5C	91	35.122
ENSBTAG00000021525	-	78	35.593	ENSBTAG00000010193	RAB7A	81	35.593
ENSBTAG00000021525	-	96	39.906	ENSBTAG00000016720	RAB1A	99	39.906
ENSBTAG00000021525	-	79	36.994	ENSBTAG00000003474	RAB15	77	36.994
ENSBTAG00000021525	-	86	38.021	ENSBTAG00000050873	-	87	38.021
ENSBTAG00000021525	-	78	32.164	ENSBTAG00000046533	RAB31	83	32.164
ENSBTAG00000021525	-	81	41.011	ENSBTAG00000018959	RAB11A	78	41.011
ENSBTAG00000021525	-	63	36.232	ENSBTAG00000046644	HRAS	86	31.792
ENSBTAG00000021525	-	76	36.842	ENSBTAG00000034712	RAB33A	69	36.842
ENSBTAG00000021525	-	76	38.095	ENSBTAG00000000025	RAB6A	76	38.095
ENSBTAG00000021525	-	77	41.520	ENSBTAG00000002417	RAB30	79	41.520
ENSBTAG00000021525	-	71	35.897	ENSBTAG00000009778	KRAS	96	31.937
ENSBTAG00000021525	-	87	46.073	ENSBTAG00000019779	RAB39B	86	46.073
ENSBTAG00000021525	-	74	34.969	ENSBTAG00000048711	-	77	35.256
ENSBTAG00000021525	-	75	36.905	ENSBTAG00000019820	RAB9B	79	36.905
ENSBTAG00000021525	-	87	41.146	ENSBTAG00000044207	RAB2B	85	41.146
ENSBTAG00000021525	-	70	33.548	ENSBTAG00000031861	RHEB	79	33.548
ENSBTAG00000021525	-	78	39.665	ENSBTAG00000003208	RAB33B	73	39.665
ENSBTAG00000021525	-	82	43.169	ENSBTAG00000046485	RAB1B	58	43.407
ENSBTAG00000021525	-	78	34.503	ENSBTAG00000014129	RAB5B	75	34.503
ENSBTAG00000021525	-	63	37.681	ENSBTAG00000046797	NRAS	86	32.948
ENSBTAG00000021525	-	90	34.673	ENSBTAG00000046385	RAB5A	88	34.673
ENSBTAG00000021525	-	79	39.884	ENSBTAG00000022044	RAB35	81	39.884
ENSBTAG00000021525	-	87	38.743	ENSBTAG00000017803	RAB14	85	38.743
ENSBTAG00000021525	-	78	41.279	ENSBTAG00000018914	RAB25	77	41.279
ENSBTAG00000021525	-	75	43.293	ENSBTAG00000000948	RAB2A	82	42.073
ENSBTAG00000021525	-	75	36.310	ENSBTAG00000010923	RAB9A	78	36.310
ENSBTAG00000021525	-	82	39.779	ENSBTAG00000002475	RAB11B	79	39.779
ENSBTAG00000021525	-	80	36.932	ENSBTAG00000005362	RAB23	70	36.932
ENSBTAG00000021525	-	78	33.333	ENSBTAG00000018053	RAB22A	84	33.333
ENSBTAG00000021525	-	80	35.593	ENSBTAG00000010356	RAB12	69	35.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021525	-	100	81.364	ENSANAG00000035487	-	100	81.364	Aotus_nancymaae
ENSBTAG00000021525	-	99	61.009	ENSCPBG00000011245	RAB42	99	62.085	Chrysemys_picta_bellii
ENSBTAG00000021525	-	100	73.303	ENSCGRG00001019426	Rab42	100	73.303	Cricetulus_griseus_chok1gshd
ENSBTAG00000021525	-	100	75.000	ENSDORG00000023607	Rab42	100	75.000	Dipodomys_ordii
ENSBTAG00000021525	-	100	78.636	ENSFCAG00000037124	-	100	79.545	Felis_catus
ENSBTAG00000021525	-	98	61.574	ENSGAGG00000004921	RAB42	99	61.321	Gopherus_agassizii
ENSBTAG00000021525	-	100	79.545	ENSSTOG00000000084	-	100	79.545	Ictidomys_tridecemlineatus
ENSBTAG00000021525	-	100	73.756	ENSMAUG00000020223	Rab42	100	73.756	Mesocricetus_auratus
ENSBTAG00000021525	-	100	82.727	ENSMICG00000029915	-	100	85.000	Microcebus_murinus
ENSBTAG00000021525	-	100	75.909	ENSMOCG00000021639	Rab42	100	75.909	Microtus_ochrogaster
ENSBTAG00000021525	-	98	61.395	ENSMODG00000023873	-	96	61.395	Monodelphis_domestica
ENSBTAG00000021525	-	100	76.364	ENSNGAG00000015676	Rab42	100	76.364	Nannospalax_galili
ENSBTAG00000021525	-	100	84.091	ENSOGAG00000006951	-	100	85.000	Otolemur_garnettii
ENSBTAG00000021525	-	99	61.290	ENSPSIG00000006831	RAB42	94	61.290	Pelodiscus_sinensis
ENSBTAG00000021525	-	100	83.182	ENSPCOG00000008605	-	100	85.455	Propithecus_coquereli
ENSBTAG00000021525	-	96	77.358	ENSSARG00000007565	-	100	77.358	Sorex_araneus
ENSBTAG00000021525	-	98	60.185	ENSSPUG00000010337	RAB42	97	60.185	Sphenodon_punctatus
ENSBTAG00000021525	-	100	85.455	ENSSSCG00000030432	-	100	85.455	Sus_scrofa