EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000021637 (Gene tree)
Gene ID: 507314
Gene Symbol: POLR3C
Alias: -
Full Name: Bos taurus RNA polymerase III subunit C (POLR3C)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 13198 bases
Position: chr3:21519781-21532978
Accession: NM_001038511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000028832	RNA_pol_Rpc82	PF05645.13	4.6e-43	1	1
ENSBTAP00000073290	RNA_pol_Rpc82	PF05645.13	1.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028832	-	2183	-	ENSBTAP00000028832	533 (aa)	-	Q2TBL4
ENSBTAT00000079092	-	1587	-	ENSBTAP00000073290	528 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000021637's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03020	RNA polymerase	KEGG
bta04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021637	POLR3C	100	95.872	ENSG00000186141	POLR3C	99	95.872	Homo_sapiens
ENSBTAG00000021637	POLR3C	99	64.706	ENSAPOG00000008722	polr3c	99	64.890	Acanthochromis_polyacanthus
ENSBTAG00000021637	POLR3C	100	96.998	ENSAMEG00000017531	POLR3C	99	96.998	Ailuropoda_melanoleuca
ENSBTAG00000021637	POLR3C	99	64.801	ENSACIG00000008064	polr3c	99	64.801	Amphilophus_citrinellus
ENSBTAG00000021637	POLR3C	99	66.604	ENSAOCG00000011695	polr3c	99	66.604	Amphiprion_ocellaris
ENSBTAG00000021637	POLR3C	99	66.604	ENSAPEG00000004426	polr3c	99	66.604	Amphiprion_percula
ENSBTAG00000021637	POLR3C	99	64.835	ENSATEG00000023618	polr3c	92	65.926	Anabas_testudineus
ENSBTAG00000021637	POLR3C	100	95.872	ENSANAG00000036434	POLR3C	99	95.872	Aotus_nancymaae
ENSBTAG00000021637	POLR3C	99	64.727	ENSACLG00000019970	polr3c	99	64.727	Astatotilapia_calliptera
ENSBTAG00000021637	POLR3C	99	64.074	ENSAMXG00000008273	polr3c	99	64.444	Astyanax_mexicanus
ENSBTAG00000021637	POLR3C	100	95.872	ENSCJAG00000002314	POLR3C	99	95.872	Callithrix_jacchus
ENSBTAG00000021637	POLR3C	100	96.623	ENSCAFG00000011257	POLR3C	99	96.654	Canis_familiaris
ENSBTAG00000021637	POLR3C	95	96.654	ENSCAFG00020020066	POLR3C	99	96.654	Canis_lupus_dingo
ENSBTAG00000021637	POLR3C	100	99.250	ENSCHIG00000022431	POLR3C	99	99.250	Capra_hircus
ENSBTAG00000021637	POLR3C	100	95.872	ENSTSYG00000002292	POLR3C	99	95.872	Carlito_syrichta
ENSBTAG00000021637	POLR3C	95	74.213	ENSCAPG00000011559	POLR3C	100	74.213	Cavia_aperea
ENSBTAG00000021637	POLR3C	100	93.621	ENSCPOG00000004654	POLR3C	99	93.621	Cavia_porcellus
ENSBTAG00000021637	POLR3C	100	95.872	ENSCCAG00000027077	POLR3C	99	95.872	Cebus_capucinus
ENSBTAG00000021637	POLR3C	100	96.060	ENSCATG00000040166	POLR3C	99	96.060	Cercocebus_atys
ENSBTAG00000021637	POLR3C	89	94.758	ENSCLAG00000001652	POLR3C	99	94.758	Chinchilla_lanigera
ENSBTAG00000021637	POLR3C	100	96.060	ENSCSAG00000001762	POLR3C	99	96.060	Chlorocebus_sabaeus
ENSBTAG00000021637	POLR3C	100	93.996	ENSCHOG00000006911	POLR3C	99	93.996	Choloepus_hoffmanni
ENSBTAG00000021637	POLR3C	100	87.430	ENSCPBG00000007883	POLR3C	99	87.430	Chrysemys_picta_bellii
ENSBTAG00000021637	POLR3C	99	48.030	ENSCING00000007024	-	99	48.030	Ciona_intestinalis
ENSBTAG00000021637	POLR3C	99	48.037	ENSCSAVG00000008586	-	99	48.037	Ciona_savignyi
ENSBTAG00000021637	POLR3C	100	96.060	ENSCANG00000032538	POLR3C	99	96.060	Colobus_angolensis_palliatus
ENSBTAG00000021637	POLR3C	100	94.747	ENSCGRG00001005471	Polr3c	99	94.747	Cricetulus_griseus_chok1gshd
ENSBTAG00000021637	POLR3C	100	94.747	ENSCGRG00000016787	Polr3c	99	94.747	Cricetulus_griseus_crigri
ENSBTAG00000021637	POLR3C	99	65.378	ENSCSEG00000002425	polr3c	99	66.111	Cynoglossus_semilaevis
ENSBTAG00000021637	POLR3C	99	63.177	ENSCVAG00000022458	polr3c	99	63.570	Cyprinodon_variegatus
ENSBTAG00000021637	POLR3C	99	63.177	ENSCVAG00000009443	polr3c	99	63.570	Cyprinodon_variegatus
ENSBTAG00000021637	POLR3C	99	66.729	ENSDARG00000057562	polr3c	99	66.729	Danio_rerio
ENSBTAG00000021637	POLR3C	72	96.084	ENSDNOG00000012149	POLR3C	100	96.084	Dasypus_novemcinctus
ENSBTAG00000021637	POLR3C	100	94.559	ENSDORG00000013430	Polr3c	99	94.559	Dipodomys_ordii
ENSBTAG00000021637	POLR3C	97	33.080	FBgn0038057	CG12267	96	33.080	Drosophila_melanogaster
ENSBTAG00000021637	POLR3C	100	83.677	ENSETEG00000017696	POLR3C	99	83.677	Echinops_telfairi
ENSBTAG00000021637	POLR3C	100	96.998	ENSEASG00005007417	POLR3C	99	96.998	Equus_asinus_asinus
ENSBTAG00000021637	POLR3C	100	95.085	ENSECAG00000023713	POLR3C	99	94.707	Equus_caballus
ENSBTAG00000021637	POLR3C	100	89.681	ENSEEUG00000011124	POLR3C	99	89.681	Erinaceus_europaeus
ENSBTAG00000021637	POLR3C	99	67.587	ENSELUG00000013209	polr3c	99	67.956	Esox_lucius
ENSBTAG00000021637	POLR3C	100	96.811	ENSFCAG00000013360	POLR3C	99	96.811	Felis_catus
ENSBTAG00000021637	POLR3C	100	93.809	ENSFDAG00000021078	POLR3C	99	93.809	Fukomys_damarensis
ENSBTAG00000021637	POLR3C	99	64.717	ENSFHEG00000000872	polr3c	99	64.899	Fundulus_heteroclitus
ENSBTAG00000021637	POLR3C	99	64.195	ENSGMOG00000018937	polr3c	99	64.781	Gadus_morhua
ENSBTAG00000021637	POLR3C	86	79.085	ENSGALG00000052515	-	100	79.085	Gallus_gallus
ENSBTAG00000021637	POLR3C	99	64.781	ENSGAFG00000014721	polr3c	99	64.781	Gambusia_affinis
ENSBTAG00000021637	POLR3C	99	65.478	ENSGACG00000011829	polr3c	99	65.918	Gasterosteus_aculeatus
ENSBTAG00000021637	POLR3C	100	86.867	ENSGAGG00000010176	POLR3C	99	86.867	Gopherus_agassizii
ENSBTAG00000021637	POLR3C	100	95.497	ENSGGOG00000007279	POLR3C	99	95.497	Gorilla_gorilla
ENSBTAG00000021637	POLR3C	99	64.909	ENSHBUG00000003619	polr3c	99	64.909	Haplochromis_burtoni
ENSBTAG00000021637	POLR3C	100	93.246	ENSHGLG00000014978	POLR3C	99	93.246	Heterocephalus_glaber_female
ENSBTAG00000021637	POLR3C	100	93.246	ENSHGLG00100015620	POLR3C	99	93.246	Heterocephalus_glaber_male
ENSBTAG00000021637	POLR3C	99	65.799	ENSHCOG00000000823	polr3c	99	65.799	Hippocampus_comes
ENSBTAG00000021637	POLR3C	99	65.934	ENSIPUG00000008657	polr3c	99	66.667	Ictalurus_punctatus
ENSBTAG00000021637	POLR3C	100	96.435	ENSSTOG00000014601	POLR3C	99	96.435	Ictidomys_tridecemlineatus
ENSBTAG00000021637	POLR3C	100	93.058	ENSJJAG00000011447	Polr3c	99	93.058	Jaculus_jaculus
ENSBTAG00000021637	POLR3C	99	63.784	ENSKMAG00000001574	polr3c	99	65.568	Kryptolebias_marmoratus
ENSBTAG00000021637	POLR3C	99	64.286	ENSLBEG00000026567	polr3c	99	64.286	Labrus_bergylta
ENSBTAG00000021637	POLR3C	99	73.872	ENSLACG00000017216	POLR3C	99	75.000	Latimeria_chalumnae
ENSBTAG00000021637	POLR3C	99	60.926	ENSLOCG00000006400	polr3c	99	60.926	Lepisosteus_oculatus
ENSBTAG00000021637	POLR3C	100	96.623	ENSLAFG00000029485	POLR3C	100	96.623	Loxodonta_africana
ENSBTAG00000021637	POLR3C	100	96.248	ENSMFAG00000040338	POLR3C	99	96.248	Macaca_fascicularis
ENSBTAG00000021637	POLR3C	100	96.248	ENSMMUG00000016735	POLR3C	99	96.248	Macaca_mulatta
ENSBTAG00000021637	POLR3C	100	96.248	ENSMNEG00000040944	POLR3C	99	96.248	Macaca_nemestrina
ENSBTAG00000021637	POLR3C	100	96.248	ENSMLEG00000031091	POLR3C	99	96.248	Mandrillus_leucophaeus
ENSBTAG00000021637	POLR3C	99	65.201	ENSMAMG00000014770	polr3c	99	65.201	Mastacembelus_armatus
ENSBTAG00000021637	POLR3C	99	64.727	ENSMZEG00005015882	polr3c	99	64.727	Maylandia_zebra
ENSBTAG00000021637	POLR3C	77	77.778	ENSMAUG00000021521	-	98	77.778	Mesocricetus_auratus
ENSBTAG00000021637	POLR3C	100	94.184	ENSMAUG00000001454	-	99	94.184	Mesocricetus_auratus
ENSBTAG00000021637	POLR3C	100	95.497	ENSMICG00000034253	POLR3C	99	95.497	Microcebus_murinus
ENSBTAG00000021637	POLR3C	100	85.448	ENSMOCG00000000997	Polr3c	99	85.448	Microtus_ochrogaster
ENSBTAG00000021637	POLR3C	99	66.544	ENSMMOG00000003989	polr3c	99	66.544	Mola_mola
ENSBTAG00000021637	POLR3C	100	90.637	ENSMODG00000018745	-	74	90.637	Monodelphis_domestica
ENSBTAG00000021637	POLR3C	99	64.706	ENSMALG00000000156	polr3c	99	64.706	Monopterus_albus
ENSBTAG00000021637	POLR3C	100	93.246	MGP_CAROLIEiJ_G0025390	Polr3c	99	93.246	Mus_caroli
ENSBTAG00000021637	POLR3C	100	93.246	ENSMUSG00000028099	Polr3c	99	93.246	Mus_musculus
ENSBTAG00000021637	POLR3C	100	93.058	MGP_PahariEiJ_G0026835	Polr3c	99	93.058	Mus_pahari
ENSBTAG00000021637	POLR3C	100	92.495	MGP_SPRETEiJ_G0026337	Polr3c	99	92.495	Mus_spretus
ENSBTAG00000021637	POLR3C	100	96.811	ENSMPUG00000000656	POLR3C	99	96.811	Mustela_putorius_furo
ENSBTAG00000021637	POLR3C	100	93.832	ENSMLUG00000004060	POLR3C	99	93.832	Myotis_lucifugus
ENSBTAG00000021637	POLR3C	100	93.433	ENSNGAG00000013090	Polr3c	99	93.433	Nannospalax_galili
ENSBTAG00000021637	POLR3C	99	65.091	ENSNBRG00000003707	polr3c	99	65.091	Neolamprologus_brichardi
ENSBTAG00000021637	POLR3C	100	95.685	ENSNLEG00000005645	POLR3C	99	95.685	Nomascus_leucogenys
ENSBTAG00000021637	POLR3C	87	92.857	ENSMEUG00000012664	POLR3C	87	92.857	Notamacropus_eugenii
ENSBTAG00000021637	POLR3C	100	92.120	ENSOPRG00000004244	POLR3C	99	92.120	Ochotona_princeps
ENSBTAG00000021637	POLR3C	100	92.683	ENSODEG00000000304	POLR3C	99	92.683	Octodon_degus
ENSBTAG00000021637	POLR3C	99	65.455	ENSONIG00000006370	polr3c	99	65.455	Oreochromis_niloticus
ENSBTAG00000021637	POLR3C	67	61.667	ENSOANG00000000559	-	100	61.667	Ornithorhynchus_anatinus
ENSBTAG00000021637	POLR3C	100	95.497	ENSOCUG00000003050	POLR3C	99	95.497	Oryctolagus_cuniculus
ENSBTAG00000021637	POLR3C	99	65.448	ENSORLG00000010133	polr3c	99	65.448	Oryzias_latipes
ENSBTAG00000021637	POLR3C	99	65.082	ENSORLG00020009245	polr3c	99	65.265	Oryzias_latipes_hni
ENSBTAG00000021637	POLR3C	99	65.082	ENSORLG00015015223	polr3c	99	65.082	Oryzias_latipes_hsok
ENSBTAG00000021637	POLR3C	99	64.416	ENSOMEG00000008558	polr3c	99	64.416	Oryzias_melastigma
ENSBTAG00000021637	POLR3C	100	95.872	ENSOGAG00000000209	POLR3C	99	95.872	Otolemur_garnettii
ENSBTAG00000021637	POLR3C	100	99.250	ENSOARG00000020588	POLR3C	99	99.250	Ovis_aries
ENSBTAG00000021637	POLR3C	100	95.685	ENSPPAG00000025184	POLR3C	99	95.685	Pan_paniscus
ENSBTAG00000021637	POLR3C	100	96.623	ENSPPRG00000008809	POLR3C	99	96.623	Panthera_pardus
ENSBTAG00000021637	POLR3C	100	96.623	ENSPTIG00000009916	POLR3C	99	96.623	Panthera_tigris_altaica
ENSBTAG00000021637	POLR3C	100	95.872	ENSPTRG00000001208	POLR3C	99	95.872	Pan_troglodytes
ENSBTAG00000021637	POLR3C	100	95.872	ENSPANG00000019404	POLR3C	99	95.872	Papio_anubis
ENSBTAG00000021637	POLR3C	99	66.976	ENSPKIG00000014883	polr3c	99	66.976	Paramormyrops_kingsleyae
ENSBTAG00000021637	POLR3C	100	87.617	ENSPSIG00000004694	POLR3C	99	87.617	Pelodiscus_sinensis
ENSBTAG00000021637	POLR3C	99	64.991	ENSPMGG00000007761	polr3c	99	64.991	Periophthalmus_magnuspinnatus
ENSBTAG00000021637	POLR3C	100	93.996	ENSPEMG00000016322	Polr3c	99	93.996	Peromyscus_maniculatus_bairdii
ENSBTAG00000021637	POLR3C	99	63.197	ENSPMAG00000006993	polr3c	99	63.197	Petromyzon_marinus
ENSBTAG00000021637	POLR3C	100	90.262	ENSPCIG00000011954	POLR3C	99	90.262	Phascolarctos_cinereus
ENSBTAG00000021637	POLR3C	99	64.781	ENSPFOG00000014106	polr3c	99	64.791	Poecilia_formosa
ENSBTAG00000021637	POLR3C	99	66.604	ENSPLAG00000018932	polr3c	99	66.792	Poecilia_latipinna
ENSBTAG00000021637	POLR3C	98	70.854	ENSPMEG00000023273	polr3c	99	64.610	Poecilia_mexicana
ENSBTAG00000021637	POLR3C	99	65.074	ENSPREG00000017050	polr3c	99	65.434	Poecilia_reticulata
ENSBTAG00000021637	POLR3C	100	95.497	ENSPPYG00000000936	POLR3C	99	95.497	Pongo_abelii
ENSBTAG00000021637	POLR3C	91	94.421	ENSPCAG00000010501	POLR3C	99	94.421	Procavia_capensis
ENSBTAG00000021637	POLR3C	87	96.825	ENSPCOG00000024937	POLR3C	99	96.825	Propithecus_coquereli
ENSBTAG00000021637	POLR3C	100	96.060	ENSPVAG00000014483	POLR3C	100	96.060	Pteropus_vampyrus
ENSBTAG00000021637	POLR3C	99	64.909	ENSPNYG00000004504	polr3c	99	64.909	Pundamilia_nyererei
ENSBTAG00000021637	POLR3C	98	63.838	ENSPNAG00000018675	polr3c	99	64.945	Pygocentrus_nattereri
ENSBTAG00000021637	POLR3C	100	93.246	ENSRNOG00000033560	Polr3c	99	93.246	Rattus_norvegicus
ENSBTAG00000021637	POLR3C	100	95.872	ENSRBIG00000035432	POLR3C	99	95.872	Rhinopithecus_bieti
ENSBTAG00000021637	POLR3C	100	95.872	ENSRROG00000039959	POLR3C	99	95.872	Rhinopithecus_roxellana
ENSBTAG00000021637	POLR3C	91	90.083	ENSSBOG00000028429	POLR3C	99	90.083	Saimiri_boliviensis_boliviensis
ENSBTAG00000021637	POLR3C	100	90.075	ENSSHAG00000018565	POLR3C	99	90.075	Sarcophilus_harrisii
ENSBTAG00000021637	POLR3C	99	68.216	ENSSFOG00015021863	polr3c	99	68.843	Scleropages_formosus
ENSBTAG00000021637	POLR3C	99	66.105	ENSSMAG00000016000	polr3c	99	66.667	Scophthalmus_maximus
ENSBTAG00000021637	POLR3C	99	66.729	ENSSDUG00000006590	polr3c	99	66.729	Seriola_dumerili
ENSBTAG00000021637	POLR3C	99	66.667	ENSSLDG00000015614	polr3c	99	66.667	Seriola_lalandi_dorsalis
ENSBTAG00000021637	POLR3C	63	95.833	ENSSARG00000014380	POLR3C	99	95.833	Sorex_araneus
ENSBTAG00000021637	POLR3C	100	86.492	ENSSPUG00000001834	POLR3C	99	86.492	Sphenodon_punctatus
ENSBTAG00000021637	POLR3C	99	66.417	ENSSPAG00000022520	polr3c	99	66.417	Stegastes_partitus
ENSBTAG00000021637	POLR3C	100	96.248	ENSSSCG00000006691	POLR3C	99	96.248	Sus_scrofa
ENSBTAG00000021637	POLR3C	100	72.862	ENSTGUG00000016941	POLR3C	99	72.862	Taeniopygia_guttata
ENSBTAG00000021637	POLR3C	99	64.391	ENSTRUG00000010726	polr3c	99	64.760	Takifugu_rubripes
ENSBTAG00000021637	POLR3C	99	65.619	ENSTNIG00000019501	polr3c	99	66.048	Tetraodon_nigroviridis
ENSBTAG00000021637	POLR3C	75	94.221	ENSTBEG00000015610	POLR3C	99	94.221	Tupaia_belangeri
ENSBTAG00000021637	POLR3C	72	100.000	ENSTTRG00000009216	POLR3C	72	100.000	Tursiops_truncatus
ENSBTAG00000021637	POLR3C	100	97.186	ENSUAMG00000021906	POLR3C	99	97.186	Ursus_americanus
ENSBTAG00000021637	POLR3C	100	97.186	ENSUMAG00000010180	POLR3C	99	97.186	Ursus_maritimus
ENSBTAG00000021637	POLR3C	100	96.435	ENSVVUG00000007421	POLR3C	99	96.435	Vulpes_vulpes
ENSBTAG00000021637	POLR3C	99	61.308	ENSXCOG00000019524	polr3c	99	61.308	Xiphophorus_couchianus
ENSBTAG00000021637	POLR3C	99	63.818	ENSXMAG00000016215	polr3c	99	64.351	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0032728	positive regulation of interferon-beta production	-	ISS	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045089	positive regulation of innate immune response	-	ISS	Process
GO:0051607	defense response to virus	-	IEA	Process