EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000021645 (Gene tree)
Gene ID: 511463
Gene Symbol: MBD4
Alias: -
Full Name: Bos taurus methyl-CpG binding domain 4%2C DNA glycosylase (MBD4)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 9152 bases
Position: chr22:56308409-56317560
Accession: NM_001034405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000028844	MBD	PF01429.19	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028844	-	2122	XM_024982591	ENSBTAP00000028844	554 (aa)	XP_024838359	F1MUX1

Gene Model

Click here to download ENSBTAG00000021645's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021645	MBD4	100	72.696	ENSG00000129071	MBD4	98	93.548	Homo_sapiens
ENSBTAG00000021645	MBD4	100	72.389	ENSAMEG00000004562	MBD4	99	72.389	Ailuropoda_melanoleuca
ENSBTAG00000021645	MBD4	57	59.449	ENSAOCG00000001157	mbd4	62	59.449	Amphiprion_ocellaris
ENSBTAG00000021645	MBD4	100	69.788	ENSCJAG00000017293	MBD4	99	69.788	Callithrix_jacchus
ENSBTAG00000021645	MBD4	100	73.369	ENSCAFG00000004867	MBD4	99	73.369	Canis_familiaris
ENSBTAG00000021645	MBD4	100	73.369	ENSCAFG00020007082	MBD4	99	73.369	Canis_lupus_dingo
ENSBTAG00000021645	MBD4	100	93.502	ENSCHIG00000009760	MBD4	100	93.502	Capra_hircus
ENSBTAG00000021645	MBD4	100	69.512	ENSCCAG00000029796	MBD4	99	69.512	Cebus_capucinus
ENSBTAG00000021645	MBD4	100	70.855	ENSCATG00000035211	MBD4	99	70.855	Cercocebus_atys
ENSBTAG00000021645	MBD4	100	64.223	ENSCLAG00000008974	MBD4	100	64.223	Chinchilla_lanigera
ENSBTAG00000021645	MBD4	100	70.855	ENSCSAG00000009037	MBD4	99	70.855	Chlorocebus_sabaeus
ENSBTAG00000021645	MBD4	87	50.951	ENSCPBG00000014704	MBD4	89	50.951	Chrysemys_picta_bellii
ENSBTAG00000021645	MBD4	100	70.855	ENSCANG00000007120	MBD4	99	70.855	Colobus_angolensis_palliatus
ENSBTAG00000021645	MBD4	100	63.732	ENSCGRG00001003507	Mbd4	100	64.261	Cricetulus_griseus_chok1gshd
ENSBTAG00000021645	MBD4	100	63.732	ENSCGRG00000010974	Mbd4	100	64.261	Cricetulus_griseus_crigri
ENSBTAG00000021645	MBD4	100	68.761	ENSDNOG00000049619	MBD4	100	68.761	Dasypus_novemcinctus
ENSBTAG00000021645	MBD4	81	59.698	ENSDORG00000000902	-	98	58.910	Dipodomys_ordii
ENSBTAG00000021645	MBD4	85	38.320	ENSEBUG00000010816	mbd4	98	38.320	Eptatretus_burgeri
ENSBTAG00000021645	MBD4	100	73.601	ENSEASG00005014800	MBD4	100	73.601	Equus_asinus_asinus
ENSBTAG00000021645	MBD4	100	73.427	ENSECAG00000022106	MBD4	100	73.427	Equus_caballus
ENSBTAG00000021645	MBD4	95	59.489	ENSEEUG00000011459	MBD4	99	59.489	Erinaceus_europaeus
ENSBTAG00000021645	MBD4	100	73.498	ENSFCAG00000000083	MBD4	99	73.498	Felis_catus
ENSBTAG00000021645	MBD4	82	44.017	ENSFALG00000013663	MBD4	99	44.008	Ficedula_albicollis
ENSBTAG00000021645	MBD4	87	51.931	ENSGAGG00000018644	MBD4	89	51.931	Gopherus_agassizii
ENSBTAG00000021645	MBD4	100	71.478	ENSGGOG00000010698	MBD4	99	71.478	Gorilla_gorilla
ENSBTAG00000021645	MBD4	100	65.794	ENSHGLG00000009034	MBD4	100	65.794	Heterocephalus_glaber_female
ENSBTAG00000021645	MBD4	100	65.794	ENSHGLG00100000135	MBD4	100	65.794	Heterocephalus_glaber_male
ENSBTAG00000021645	MBD4	100	67.888	ENSSTOG00000020663	MBD4	100	67.888	Ictidomys_tridecemlineatus
ENSBTAG00000021645	MBD4	86	44.732	ENSLOCG00000013054	MBD4	99	45.635	Lepisosteus_oculatus
ENSBTAG00000021645	MBD4	99	69.550	ENSLAFG00000010609	MBD4	99	69.550	Loxodonta_africana
ENSBTAG00000021645	MBD4	99	70.804	ENSMFAG00000002266	MBD4	99	70.804	Macaca_fascicularis
ENSBTAG00000021645	MBD4	99	70.209	ENSMMUG00000012723	MBD4	99	70.209	Macaca_mulatta
ENSBTAG00000021645	MBD4	95	69.343	ENSMNEG00000029752	MBD4	99	69.343	Macaca_nemestrina
ENSBTAG00000021645	MBD4	100	70.855	ENSMLEG00000024859	MBD4	99	70.855	Mandrillus_leucophaeus
ENSBTAG00000021645	MBD4	100	71.503	ENSMICG00000008022	MBD4	99	71.503	Microcebus_murinus
ENSBTAG00000021645	MBD4	67	45.767	ENSMOCG00000002466	-	96	45.767	Microtus_ochrogaster
ENSBTAG00000021645	MBD4	86	58.333	ENSMODG00000006399	-	99	58.333	Monodelphis_domestica
ENSBTAG00000021645	MBD4	100	62.063	MGP_CAROLIEiJ_G0028760	Mbd4	100	62.063	Mus_caroli
ENSBTAG00000021645	MBD4	100	61.538	ENSMUSG00000030322	Mbd4	100	61.538	Mus_musculus
ENSBTAG00000021645	MBD4	100	62.653	MGP_PahariEiJ_G0022511	-	100	62.653	Mus_pahari
ENSBTAG00000021645	MBD4	100	60.976	MGP_SPRETEiJ_G0029788	Mbd4	100	60.976	Mus_spretus
ENSBTAG00000021645	MBD4	100	72.261	ENSMPUG00000017195	MBD4	99	72.261	Mustela_putorius_furo
ENSBTAG00000021645	MBD4	95	74.088	ENSMLUG00000014766	MBD4	100	74.088	Myotis_lucifugus
ENSBTAG00000021645	MBD4	100	71.379	ENSNLEG00000005337	MBD4	99	71.379	Nomascus_leucogenys
ENSBTAG00000021645	MBD4	52	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSBTAG00000021645	MBD4	100	63.112	ENSOPRG00000000473	MBD4	99	63.112	Ochotona_princeps
ENSBTAG00000021645	MBD4	85	44.332	ENSONIG00000017212	mbd4	100	44.332	Oreochromis_niloticus
ENSBTAG00000021645	MBD4	74	42.593	ENSOANG00000004589	-	97	42.369	Ornithorhynchus_anatinus
ENSBTAG00000021645	MBD4	100	63.194	ENSOCUG00000013006	MBD4	99	63.194	Oryctolagus_cuniculus
ENSBTAG00000021645	MBD4	86	43.064	ENSORLG00015015342	mbd4	98	43.243	Oryzias_latipes_hsok
ENSBTAG00000021645	MBD4	100	67.788	ENSOGAG00000010236	MBD4	100	67.788	Otolemur_garnettii
ENSBTAG00000021645	MBD4	100	93.682	ENSOARG00000014699	MBD4	100	93.682	Ovis_aries
ENSBTAG00000021645	MBD4	100	72.000	ENSPPAG00000036528	MBD4	99	72.000	Pan_paniscus
ENSBTAG00000021645	MBD4	100	72.792	ENSPPRG00000016480	MBD4	99	72.792	Panthera_pardus
ENSBTAG00000021645	MBD4	100	72.174	ENSPTRG00000015377	MBD4	99	72.174	Pan_troglodytes
ENSBTAG00000021645	MBD4	100	71.030	ENSPANG00000015047	MBD4	99	71.030	Papio_anubis
ENSBTAG00000021645	MBD4	94	46.903	ENSPSIG00000007892	MBD4	96	46.903	Pelodiscus_sinensis
ENSBTAG00000021645	MBD4	91	56.069	ENSPEMG00000006226	Mbd4	97	56.455	Peromyscus_maniculatus_bairdii
ENSBTAG00000021645	MBD4	90	56.395	ENSPCIG00000002276	-	98	56.395	Phascolarctos_cinereus
ENSBTAG00000021645	MBD4	100	71.080	ENSPPYG00000013417	MBD4	99	71.080	Pongo_abelii
ENSBTAG00000021645	MBD4	95	65.938	ENSPCAG00000012915	MBD4	99	65.938	Procavia_capensis
ENSBTAG00000021645	MBD4	100	72.552	ENSPVAG00000005238	MBD4	99	72.552	Pteropus_vampyrus
ENSBTAG00000021645	MBD4	100	61.780	ENSRNOG00000010919	Mbd4	100	61.955	Rattus_norvegicus
ENSBTAG00000021645	MBD4	100	71.030	ENSRBIG00000027722	MBD4	99	71.030	Rhinopithecus_bieti
ENSBTAG00000021645	MBD4	100	70.855	ENSRROG00000029136	MBD4	99	70.855	Rhinopithecus_roxellana
ENSBTAG00000021645	MBD4	100	69.231	ENSSBOG00000016810	MBD4	99	69.231	Saimiri_boliviensis_boliviensis
ENSBTAG00000021645	MBD4	99	54.336	ENSSHAG00000012953	MBD4	99	52.686	Sarcophilus_harrisii
ENSBTAG00000021645	MBD4	86	41.551	ENSSFOG00015016292	mbd4	95	41.551	Scleropages_formosus
ENSBTAG00000021645	MBD4	81	60.171	ENSSARG00000004496	-	80	60.171	Sorex_araneus
ENSBTAG00000021645	MBD4	86	51.874	ENSSPUG00000017344	MBD4	91	51.874	Sphenodon_punctatus
ENSBTAG00000021645	MBD4	100	73.380	ENSSSCG00000033303	MBD4	100	73.380	Sus_scrofa
ENSBTAG00000021645	MBD4	87	61.468	ENSTBEG00000003041	-	87	61.468	Tupaia_belangeri
ENSBTAG00000021645	MBD4	98	75.936	ENSTTRG00000011265	MBD4	100	75.936	Tursiops_truncatus
ENSBTAG00000021645	MBD4	87	72.967	ENSUAMG00000000814	MBD4	100	72.967	Ursus_americanus
ENSBTAG00000021645	MBD4	100	72.743	ENSUMAG00000017542	MBD4	100	72.743	Ursus_maritimus
ENSBTAG00000021645	MBD4	68	71.028	ENSVPAG00000004040	-	68	71.028	Vicugna_pacos
ENSBTAG00000021645	MBD4	100	72.840	ENSVVUG00000014222	MBD4	99	72.840	Vulpes_vulpes