EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000021965 (Gene tree)
Gene ID: 533984
Gene Symbol: SUB1
Alias: -
Full Name: Bos taurus SUB1 homolog%2C transcriptional regulator (SUB1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 62862 bases
Position: chr20:41067802-41130663
Accession: NM_001105407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000029284	PC4	PF02229.16	7.7e-25	1	1
ENSBTAP00000064258	PC4	PF02229.16	7.8e-25	1	1
ENSBTAP00000057577	PC4	PF02229.16	8.3e-25	1	1
ENSBTAP00000073109	PC4	PF02229.16	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000076677	-	458	-	ENSBTAP00000064258	137 (aa)	-	-
ENSBTAT00000029284	-	3358	-	ENSBTAP00000029284	127 (aa)	-	A7YWC6
ENSBTAT00000066394	-	452	-	ENSBTAP00000057577	132 (aa)	-	-
ENSBTAT00000071029	-	664	-	ENSBTAP00000073109	167 (aa)	-	UPI000383C873

Gene Model

Click here to download ENSBTAG00000021965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021965	SUB1	100	99.213	ENSG00000113387	SUB1	100	100.000	Homo_sapiens
ENSBTAG00000021965	SUB1	100	70.079	ENSAPOG00000005917	SUB1	100	66.142	Acanthochromis_polyacanthus
ENSBTAG00000021965	SUB1	100	98.425	ENSAMEG00000006238	SUB1	96	98.438	Ailuropoda_melanoleuca
ENSBTAG00000021965	SUB1	100	72.441	ENSACIG00000015976	sub1b	100	68.504	Amphilophus_citrinellus
ENSBTAG00000021965	SUB1	85	70.370	ENSAOCG00000002323	-	86	61.818	Amphiprion_ocellaris
ENSBTAG00000021965	SUB1	91	68.966	ENSAOCG00000007313	-	82	74.510	Amphiprion_ocellaris
ENSBTAG00000021965	SUB1	100	73.228	ENSAPEG00000024347	sub1b	100	69.291	Amphiprion_percula
ENSBTAG00000021965	SUB1	51	70.769	ENSAPEG00000014618	-	62	70.769	Amphiprion_percula
ENSBTAG00000021965	SUB1	87	66.071	ENSAPEG00000017151	-	71	71.739	Amphiprion_percula
ENSBTAG00000021965	SUB1	100	72.441	ENSATEG00000010340	sub1b	100	68.504	Anabas_testudineus
ENSBTAG00000021965	SUB1	100	79.851	ENSACAG00000007974	SUB1	100	79.851	Anolis_carolinensis
ENSBTAG00000021965	SUB1	100	99.213	ENSANAG00000011651	-	100	99.213	Aotus_nancymaae
ENSBTAG00000021965	SUB1	100	94.488	ENSANAG00000023392	-	83	94.488	Aotus_nancymaae
ENSBTAG00000021965	SUB1	100	74.016	ENSACLG00000016875	sub1b	66	69.466	Astatotilapia_calliptera
ENSBTAG00000021965	SUB1	100	77.953	ENSAMXG00000037104	sub1b	100	74.016	Astyanax_mexicanus
ENSBTAG00000021965	SUB1	80	99.020	ENSCJAG00000018718	SUB1	98	99.020	Callithrix_jacchus
ENSBTAG00000021965	SUB1	100	98.425	ENSCAFG00000016713	-	96	98.425	Canis_familiaris
ENSBTAG00000021965	SUB1	91	94.783	ENSCAFG00000024488	-	86	94.444	Canis_familiaris
ENSBTAG00000021965	SUB1	100	98.425	ENSCAFG00000018879	-	88	98.425	Canis_familiaris
ENSBTAG00000021965	SUB1	100	96.875	ENSCAFG00020011479	-	77	96.875	Canis_lupus_dingo
ENSBTAG00000021965	SUB1	100	98.425	ENSCAFG00020016840	-	100	98.425	Canis_lupus_dingo
ENSBTAG00000021965	SUB1	100	99.213	ENSCHIG00000008460	SUB1	100	99.213	Capra_hircus
ENSBTAG00000021965	SUB1	100	87.402	ENSTSYG00000035366	-	83	87.402	Carlito_syrichta
ENSBTAG00000021965	SUB1	100	91.538	ENSTSYG00000014069	-	93	91.538	Carlito_syrichta
ENSBTAG00000021965	SUB1	100	99.213	ENSTSYG00000029948	-	100	99.213	Carlito_syrichta
ENSBTAG00000021965	SUB1	100	99.213	ENSCPOG00000031334	SUB1	100	99.213	Cavia_porcellus
ENSBTAG00000021965	SUB1	100	94.488	ENSCCAG00000020604	-	100	94.488	Cebus_capucinus
ENSBTAG00000021965	SUB1	100	92.126	ENSCCAG00000017043	-	93	92.126	Cebus_capucinus
ENSBTAG00000021965	SUB1	100	95.276	ENSCCAG00000033751	-	95	95.276	Cebus_capucinus
ENSBTAG00000021965	SUB1	100	99.213	ENSCCAG00000023605	-	100	99.213	Cebus_capucinus
ENSBTAG00000021965	SUB1	100	99.213	ENSCATG00000031199	SUB1	100	99.213	Cercocebus_atys
ENSBTAG00000021965	SUB1	100	98.438	ENSCLAG00000007522	SUB1	100	98.438	Chinchilla_lanigera
ENSBTAG00000021965	SUB1	100	99.213	ENSCSAG00000017172	-	100	99.213	Chlorocebus_sabaeus
ENSBTAG00000021965	SUB1	100	95.276	ENSCSAG00000019449	-	100	95.276	Chlorocebus_sabaeus
ENSBTAG00000021965	SUB1	100	90.551	ENSCPBG00000024218	SUB1	79	88.189	Chrysemys_picta_bellii
ENSBTAG00000021965	SUB1	100	77.953	ENSCANG00000028665	-	97	74.265	Colobus_angolensis_palliatus
ENSBTAG00000021965	SUB1	100	99.213	ENSCANG00000029372	SUB1	100	99.213	Colobus_angolensis_palliatus
ENSBTAG00000021965	SUB1	100	94.488	ENSCGRG00001003473	-	100	94.488	Cricetulus_griseus_chok1gshd
ENSBTAG00000021965	SUB1	100	77.165	ENSCGRG00001016254	-	100	77.165	Cricetulus_griseus_chok1gshd
ENSBTAG00000021965	SUB1	100	78.740	ENSCGRG00001014660	-	100	78.740	Cricetulus_griseus_chok1gshd
ENSBTAG00000021965	SUB1	100	94.488	ENSCGRG00000001133	-	100	94.488	Cricetulus_griseus_crigri
ENSBTAG00000021965	SUB1	100	81.102	ENSCGRG00000001489	-	100	81.102	Cricetulus_griseus_crigri
ENSBTAG00000021965	SUB1	100	78.740	ENSCGRG00000019368	-	100	78.740	Cricetulus_griseus_crigri
ENSBTAG00000021965	SUB1	99	76.984	ENSDARG00000053446	sub1a	100	75.591	Danio_rerio
ENSBTAG00000021965	SUB1	100	71.654	ENSDARG00000007720	sub1b	100	66.142	Danio_rerio
ENSBTAG00000021965	SUB1	100	94.488	ENSDNOG00000032396	-	100	94.488	Dasypus_novemcinctus
ENSBTAG00000021965	SUB1	100	96.063	ENSDNOG00000040794	-	100	96.063	Dasypus_novemcinctus
ENSBTAG00000021965	SUB1	100	96.063	ENSDORG00000013916	Sub1	100	96.063	Dipodomys_ordii
ENSBTAG00000021965	SUB1	79	54.902	ENSEBUG00000008746	sub1a	77	45.833	Eptatretus_burgeri
ENSBTAG00000021965	SUB1	100	99.213	ENSEASG00005007099	SUB1	100	99.213	Equus_asinus_asinus
ENSBTAG00000021965	SUB1	100	99.213	ENSECAG00000012399	SUB1	100	99.213	Equus_caballus
ENSBTAG00000021965	SUB1	81	97.087	ENSEEUG00000000436	SUB1	100	97.087	Erinaceus_europaeus
ENSBTAG00000021965	SUB1	100	98.425	ENSFCAG00000037288	SUB1	100	98.425	Felis_catus
ENSBTAG00000021965	SUB1	100	88.976	ENSFALG00000002143	SUB1	88	89.062	Ficedula_albicollis
ENSBTAG00000021965	SUB1	100	99.213	ENSFDAG00000017179	SUB1	100	99.213	Fukomys_damarensis
ENSBTAG00000021965	SUB1	100	89.764	ENSGALG00000003248	SUB1	100	89.764	Gallus_gallus
ENSBTAG00000021965	SUB1	100	51.969	ENSGALG00000027147	-	100	52.756	Gallus_gallus
ENSBTAG00000021965	SUB1	100	85.827	ENSGALG00000034905	-	100	83.465	Gallus_gallus
ENSBTAG00000021965	SUB1	100	71.654	ENSGACG00000003912	sub1b	100	66.929	Gasterosteus_aculeatus
ENSBTAG00000021965	SUB1	100	90.551	ENSGAGG00000013535	SUB1	100	90.551	Gopherus_agassizii
ENSBTAG00000021965	SUB1	100	99.213	ENSGGOG00000040900	SUB1	100	99.213	Gorilla_gorilla
ENSBTAG00000021965	SUB1	82	73.077	ENSHBUG00000013953	sub1b	96	61.069	Haplochromis_burtoni
ENSBTAG00000021965	SUB1	100	99.213	ENSHGLG00000006749	SUB1	100	99.213	Heterocephalus_glaber_female
ENSBTAG00000021965	SUB1	100	99.213	ENSHGLG00100014344	SUB1	100	99.213	Heterocephalus_glaber_male
ENSBTAG00000021965	SUB1	100	70.079	ENSHCOG00000001809	sub1b	100	64.567	Hippocampus_comes
ENSBTAG00000021965	SUB1	100	70.866	ENSIPUG00000008166	sub1	100	67.717	Ictalurus_punctatus
ENSBTAG00000021965	SUB1	100	73.643	ENSIPUG00000024367	SUB1	100	73.643	Ictalurus_punctatus
ENSBTAG00000021965	SUB1	100	98.425	ENSSTOG00000019364	SUB1	100	98.425	Ictidomys_tridecemlineatus
ENSBTAG00000021965	SUB1	100	91.339	ENSJJAG00000018885	Sub1	100	91.339	Jaculus_jaculus
ENSBTAG00000021965	SUB1	99	71.429	ENSLBEG00000010728	sub1b	100	68.504	Labrus_bergylta
ENSBTAG00000021965	SUB1	51	90.769	ENSLACG00000001068	SUB1	100	90.769	Latimeria_chalumnae
ENSBTAG00000021965	SUB1	100	77.165	ENSLOCG00000006692	sub1b	100	73.228	Lepisosteus_oculatus
ENSBTAG00000021965	SUB1	100	98.425	ENSLAFG00000032088	-	100	98.425	Loxodonta_africana
ENSBTAG00000021965	SUB1	100	98.425	ENSLAFG00000011006	-	100	98.425	Loxodonta_africana
ENSBTAG00000021965	SUB1	100	99.213	ENSMFAG00000040728	SUB1	100	99.213	Macaca_fascicularis
ENSBTAG00000021965	SUB1	100	90.551	ENSMFAG00000045643	-	62	89.922	Macaca_fascicularis
ENSBTAG00000021965	SUB1	100	99.213	ENSMMUG00000046181	SUB1	100	99.213	Macaca_mulatta
ENSBTAG00000021965	SUB1	100	99.213	ENSMNEG00000037046	SUB1	100	99.213	Macaca_nemestrina
ENSBTAG00000021965	SUB1	100	99.213	ENSMLEG00000037017	-	100	99.213	Mandrillus_leucophaeus
ENSBTAG00000021965	SUB1	100	96.850	ENSMLEG00000030509	-	96	96.124	Mandrillus_leucophaeus
ENSBTAG00000021965	SUB1	100	77.165	ENSMLEG00000043436	-	97	73.529	Mandrillus_leucophaeus
ENSBTAG00000021965	SUB1	100	70.866	ENSMAMG00000018428	sub1b	100	66.929	Mastacembelus_armatus
ENSBTAG00000021965	SUB1	100	72.441	ENSMZEG00005021252	sub1b	100	68.504	Maylandia_zebra
ENSBTAG00000021965	SUB1	100	49.606	ENSMGAG00000001200	-	95	49.606	Meleagris_gallopavo
ENSBTAG00000021965	SUB1	100	89.764	ENSMGAG00000002906	SUB1	100	89.764	Meleagris_gallopavo
ENSBTAG00000021965	SUB1	100	94.488	ENSMAUG00000020232	Sub1	100	94.488	Mesocricetus_auratus
ENSBTAG00000021965	SUB1	100	99.213	ENSMICG00000014535	SUB1	100	99.213	Microcebus_murinus
ENSBTAG00000021965	SUB1	100	93.701	ENSMOCG00000018930	-	100	93.701	Microtus_ochrogaster
ENSBTAG00000021965	SUB1	100	81.102	ENSMOCG00000016424	-	100	81.102	Microtus_ochrogaster
ENSBTAG00000021965	SUB1	100	82.857	ENSMODG00000020410	SUB1	100	80.714	Monodelphis_domestica
ENSBTAG00000021965	SUB1	100	72.441	ENSMALG00000007163	sub1b	82	74.219	Monopterus_albus
ENSBTAG00000021965	SUB1	100	94.488	MGP_CAROLIEiJ_G0019676	Sub1	100	94.488	Mus_caroli
ENSBTAG00000021965	SUB1	100	93.701	ENSMUSG00000022205	Sub1	100	93.701	Mus_musculus
ENSBTAG00000021965	SUB1	100	93.701	MGP_PahariEiJ_G0016056	Sub1	100	93.701	Mus_pahari
ENSBTAG00000021965	SUB1	100	93.701	MGP_SPRETEiJ_G0020573	Sub1	100	93.701	Mus_spretus
ENSBTAG00000021965	SUB1	100	97.638	ENSMPUG00000018418	-	100	97.638	Mustela_putorius_furo
ENSBTAG00000021965	SUB1	100	98.425	ENSMPUG00000015185	-	100	98.425	Mustela_putorius_furo
ENSBTAG00000021965	SUB1	100	92.913	ENSMLUG00000009236	-	95	92.913	Myotis_lucifugus
ENSBTAG00000021965	SUB1	100	98.425	ENSMLUG00000013685	-	96	97.656	Myotis_lucifugus
ENSBTAG00000021965	SUB1	100	95.276	ENSNGAG00000014072	-	100	95.276	Nannospalax_galili
ENSBTAG00000021965	SUB1	100	82.677	ENSNGAG00000017212	-	100	82.677	Nannospalax_galili
ENSBTAG00000021965	SUB1	100	92.126	ENSNGAG00000010782	-	84	92.126	Nannospalax_galili
ENSBTAG00000021965	SUB1	82	72.115	ENSNBRG00000008451	sub1b	100	62.903	Neolamprologus_brichardi
ENSBTAG00000021965	SUB1	100	98.425	ENSNLEG00000036068	SUB1	100	98.425	Nomascus_leucogenys
ENSBTAG00000021965	SUB1	100	98.425	ENSNLEG00000018383	-	96	97.674	Nomascus_leucogenys
ENSBTAG00000021965	SUB1	100	93.701	ENSNLEG00000035968	-	100	93.701	Nomascus_leucogenys
ENSBTAG00000021965	SUB1	100	90.551	ENSMEUG00000007770	SUB1	100	88.189	Notamacropus_eugenii
ENSBTAG00000021965	SUB1	100	96.850	ENSOPRG00000012887	SUB1	100	96.850	Ochotona_princeps
ENSBTAG00000021965	SUB1	85	96.296	ENSODEG00000015114	-	98	95.902	Octodon_degus
ENSBTAG00000021965	SUB1	100	92.913	ENSODEG00000014558	-	84	92.913	Octodon_degus
ENSBTAG00000021965	SUB1	100	99.213	ENSODEG00000001937	-	100	99.213	Octodon_degus
ENSBTAG00000021965	SUB1	100	91.339	ENSOANG00000002328	SUB1	95	91.406	Ornithorhynchus_anatinus
ENSBTAG00000021965	SUB1	100	96.063	ENSOCUG00000006262	SUB1	60	96.063	Oryctolagus_cuniculus
ENSBTAG00000021965	SUB1	100	99.213	ENSOGAG00000009012	-	100	99.213	Otolemur_garnettii
ENSBTAG00000021965	SUB1	98	98.387	ENSOGAG00000000337	-	100	98.387	Otolemur_garnettii
ENSBTAG00000021965	SUB1	100	99.213	ENSOARG00000012154	SUB1	100	99.213	Ovis_aries
ENSBTAG00000021965	SUB1	100	99.213	ENSPPAG00000011212	SUB1	100	99.213	Pan_paniscus
ENSBTAG00000021965	SUB1	100	98.425	ENSPPRG00000008557	SUB1	100	98.425	Panthera_pardus
ENSBTAG00000021965	SUB1	100	98.425	ENSPTIG00000009466	SUB1	100	98.425	Panthera_tigris_altaica
ENSBTAG00000021965	SUB1	100	99.213	ENSPTRG00000048895	SUB1	100	99.213	Pan_troglodytes
ENSBTAG00000021965	SUB1	100	92.913	ENSPTRG00000041644	-	100	92.913	Pan_troglodytes
ENSBTAG00000021965	SUB1	100	96.850	ENSPANG00000000672	-	92	96.124	Papio_anubis
ENSBTAG00000021965	SUB1	100	99.213	ENSPANG00000002644	-	96	99.219	Papio_anubis
ENSBTAG00000021965	SUB1	100	76.378	ENSPANG00000033272	-	97	72.794	Papio_anubis
ENSBTAG00000021965	SUB1	100	92.913	ENSPANG00000035601	-	100	92.913	Papio_anubis
ENSBTAG00000021965	SUB1	100	99.213	ENSPANG00000000339	-	98	98.450	Papio_anubis
ENSBTAG00000021965	SUB1	100	75.591	ENSPKIG00000016923	sub1b	100	70.079	Paramormyrops_kingsleyae
ENSBTAG00000021965	SUB1	100	91.339	ENSPSIG00000005731	SUB1	98	87.786	Pelodiscus_sinensis
ENSBTAG00000021965	SUB1	100	81.102	ENSPCIG00000020827	-	100	81.102	Phascolarctos_cinereus
ENSBTAG00000021965	SUB1	100	90.551	ENSPCIG00000020907	-	100	88.189	Phascolarctos_cinereus
ENSBTAG00000021965	SUB1	100	93.701	ENSPPYG00000018347	-	100	93.701	Pongo_abelii
ENSBTAG00000021965	SUB1	100	99.213	ENSPPYG00000015379	SUB1	100	99.213	Pongo_abelii
ENSBTAG00000021965	SUB1	100	99.213	ENSPCOG00000014391	SUB1	100	99.213	Propithecus_coquereli
ENSBTAG00000021965	SUB1	100	98.425	ENSPVAG00000004785	SUB1	100	98.425	Pteropus_vampyrus
ENSBTAG00000021965	SUB1	100	72.441	ENSPNYG00000010975	sub1b	100	68.504	Pundamilia_nyererei
ENSBTAG00000021965	SUB1	99	77.778	ENSPNAG00000005998	sub1b	99	73.810	Pygocentrus_nattereri
ENSBTAG00000021965	SUB1	96	75.591	ENSPNAG00000008693	sub1a	100	71.654	Pygocentrus_nattereri
ENSBTAG00000021965	SUB1	100	93.701	ENSRNOG00000050563	Sub1	100	93.701	Rattus_norvegicus
ENSBTAG00000021965	SUB1	100	92.126	ENSRBIG00000031233	SUB1	100	92.126	Rhinopithecus_bieti
ENSBTAG00000021965	SUB1	100	99.213	ENSRROG00000040438	SUB1	100	99.213	Rhinopithecus_roxellana
ENSBTAG00000021965	SUB1	100	85.827	ENSRROG00000042718	-	97	81.618	Rhinopithecus_roxellana
ENSBTAG00000021965	SUB1	100	99.213	ENSSBOG00000026994	SUB1	100	99.213	Saimiri_boliviensis_boliviensis
ENSBTAG00000021965	SUB1	100	90.551	ENSSHAG00000014986	SUB1	100	88.189	Sarcophilus_harrisii
ENSBTAG00000021965	SUB1	100	76.378	ENSSFOG00015018386	sub1b	100	76.378	Scleropages_formosus
ENSBTAG00000021965	SUB1	100	74.803	ENSSFOG00015017283	sub1b	100	70.079	Scleropages_formosus
ENSBTAG00000021965	SUB1	100	72.441	ENSSMAG00000000313	sub1b	100	66.929	Scophthalmus_maximus
ENSBTAG00000021965	SUB1	100	73.228	ENSSDUG00000013854	sub1b	82	70.504	Seriola_dumerili
ENSBTAG00000021965	SUB1	100	73.228	ENSSLDG00000000852	sub1b	100	67.717	Seriola_lalandi_dorsalis
ENSBTAG00000021965	SUB1	100	89.764	ENSSPUG00000016817	SUB1	100	89.764	Sphenodon_punctatus
ENSBTAG00000021965	SUB1	100	73.228	ENSSPAG00000019363	sub1b	100	67.717	Stegastes_partitus
ENSBTAG00000021965	SUB1	100	99.213	ENSSSCG00000040294	-	87	99.213	Sus_scrofa
ENSBTAG00000021965	SUB1	100	99.213	ENSSSCG00000032650	-	100	99.213	Sus_scrofa
ENSBTAG00000021965	SUB1	100	87.402	ENSTGUG00000001918	SUB1	100	87.402	Taeniopygia_guttata
ENSBTAG00000021965	SUB1	100	70.866	ENSTRUG00000024420	sub1b	100	66.929	Takifugu_rubripes
ENSBTAG00000021965	SUB1	100	66.929	ENSTNIG00000002700	sub1b	100	66.142	Tetraodon_nigroviridis
ENSBTAG00000021965	SUB1	100	97.638	ENSTBEG00000004053	-	100	97.638	Tupaia_belangeri
ENSBTAG00000021965	SUB1	100	93.701	ENSTBEG00000012861	-	100	93.701	Tupaia_belangeri
ENSBTAG00000021965	SUB1	100	97.638	ENSTBEG00000006504	-	100	97.638	Tupaia_belangeri
ENSBTAG00000021965	SUB1	99	90.476	ENSTBEG00000015821	-	100	90.476	Tupaia_belangeri
ENSBTAG00000021965	SUB1	100	93.701	ENSTBEG00000001790	-	100	93.701	Tupaia_belangeri
ENSBTAG00000021965	SUB1	100	92.913	ENSTBEG00000011247	-	99	92.913	Tupaia_belangeri
ENSBTAG00000021965	SUB1	81	99.029	ENSTTRG00000017324	SUB1	100	99.029	Tursiops_truncatus
ENSBTAG00000021965	SUB1	100	98.425	ENSUAMG00000000182	SUB1	100	98.425	Ursus_americanus
ENSBTAG00000021965	SUB1	100	98.425	ENSUMAG00000013792	SUB1	100	98.425	Ursus_maritimus
ENSBTAG00000021965	SUB1	100	89.764	ENSVPAG00000011012	SUB1	100	89.764	Vicugna_pacos
ENSBTAG00000021965	SUB1	89	90.265	ENSVVUG00000025193	-	92	92.727	Vulpes_vulpes
ENSBTAG00000021965	SUB1	100	98.425	ENSVVUG00000022166	-	100	98.425	Vulpes_vulpes
ENSBTAG00000021965	SUB1	100	80.620	ENSXETG00000027218	sub1	100	79.070	Xenopus_tropicalis