EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000023752 (Gene tree)
Gene ID: 617429
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 6010 bases
Position: chr18:14037920-14043929
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000032471	RRM_1	PF00076.22	5.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000081794	-	780	-	ENSBTAP00000070585	259 (aa)	-	-
ENSBTAT00000032540	-	804	-	ENSBTAP00000032471	267 (aa)	-	E1B908

Gene Model

Click here to download ENSBTAG00000023752's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03015	mRNA surveillance pathway	KEGG
bta05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000023752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000023752	-	71	45.960	ENSBTAG00000053753	-	60	46.199
ENSBTAG00000023752	-	70	45.178	ENSBTAG00000006884	PABPN1	54	45.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000023752	-	100	65.233	ENSG00000205022	PABPN1L	100	65.950	Homo_sapiens
ENSBTAG00000023752	-	69	55.376	ENSACAG00000013250	PABPN1L	99	55.376	Anolis_carolinensis
ENSBTAG00000023752	-	100	62.366	ENSANAG00000038178	PABPN1L	100	62.366	Aotus_nancymaae
ENSBTAG00000023752	-	52	48.667	ENSAMXG00000010873	PABPN1L	58	50.000	Astyanax_mexicanus
ENSBTAG00000023752	-	100	62.724	ENSCJAG00000045284	PABPN1L	91	63.745	Callithrix_jacchus
ENSBTAG00000023752	-	100	82.624	ENSCHIG00000013987	PABPN1L	100	79.078	Capra_hircus
ENSBTAG00000023752	-	95	61.905	ENSCAPG00000007240	PABPN1L	97	61.364	Cavia_aperea
ENSBTAG00000023752	-	100	64.516	ENSCPOG00000025951	PABPN1L	100	63.799	Cavia_porcellus
ENSBTAG00000023752	-	100	63.441	ENSCCAG00000027631	PABPN1L	100	62.774	Cebus_capucinus
ENSBTAG00000023752	-	100	68.100	ENSCATG00000031060	PABPN1L	100	68.100	Cercocebus_atys
ENSBTAG00000023752	-	100	65.950	ENSCLAG00000000704	PABPN1L	100	65.233	Chinchilla_lanigera
ENSBTAG00000023752	-	100	64.407	ENSCSAG00000002881	PABPN1L	100	64.407	Chlorocebus_sabaeus
ENSBTAG00000023752	-	69	53.368	ENSCPBG00000023441	PABPN1L	61	53.368	Chrysemys_picta_bellii
ENSBTAG00000023752	-	100	65.950	ENSCANG00000039336	PABPN1L	100	65.950	Colobus_angolensis_palliatus
ENSBTAG00000023752	-	100	65.591	ENSCGRG00001013211	Pabpn1l	100	63.043	Cricetulus_griseus_chok1gshd
ENSBTAG00000023752	-	100	65.591	ENSCGRG00000015868	Pabpn1l	100	63.043	Cricetulus_griseus_crigri
ENSBTAG00000023752	-	100	56.786	ENSDNOG00000034677	PABPN1L	90	60.166	Dasypus_novemcinctus
ENSBTAG00000023752	-	100	74.368	ENSEASG00005000777	PABPN1L	100	71.480	Equus_asinus_asinus
ENSBTAG00000023752	-	100	75.090	ENSECAG00000000378	PABPN1L	100	72.202	Equus_caballus
ENSBTAG00000023752	-	100	61.338	ENSEEUG00000004747	PABPN1L	100	60.595	Erinaceus_europaeus
ENSBTAG00000023752	-	100	75.540	ENSFCAG00000010465	PABPN1L	100	74.007	Felis_catus
ENSBTAG00000023752	-	72	54.872	ENSFALG00000003319	PABPN1L	80	53.093	Ficedula_albicollis
ENSBTAG00000023752	-	100	65.950	ENSFDAG00000021067	PABPN1L	100	64.643	Fukomys_damarensis
ENSBTAG00000023752	-	64	55.367	ENSGAGG00000010613	PABPN1L	53	57.862	Gopherus_agassizii
ENSBTAG00000023752	-	100	67.025	ENSGGOG00000012670	PABPN1L	100	67.025	Gorilla_gorilla
ENSBTAG00000023752	-	96	65.169	ENSHGLG00000014207	PABPN1L	96	64.844	Heterocephalus_glaber_female
ENSBTAG00000023752	-	96	65.169	ENSHGLG00100005230	PABPN1L	96	64.844	Heterocephalus_glaber_male
ENSBTAG00000023752	-	57	47.097	ENSIPUG00000023583	PABPN1L	89	47.399	Ictalurus_punctatus
ENSBTAG00000023752	-	100	63.251	ENSSTOG00000020814	PABPN1L	92	61.628	Ictidomys_tridecemlineatus
ENSBTAG00000023752	-	100	64.158	ENSJJAG00000006433	Pabpn1l	100	61.649	Jaculus_jaculus
ENSBTAG00000023752	-	57	44.375	ENSLBEG00000011647	PABPN1L	60	45.509	Labrus_bergylta
ENSBTAG00000023752	-	69	64.249	ENSLAFG00000025902	-	78	63.731	Loxodonta_africana
ENSBTAG00000023752	-	100	67.742	ENSMFAG00000002924	PABPN1L	100	67.742	Macaca_fascicularis
ENSBTAG00000023752	-	100	66.906	ENSMMUG00000012438	PABPN1L	100	66.906	Macaca_mulatta
ENSBTAG00000023752	-	100	67.742	ENSMNEG00000044808	PABPN1L	100	67.742	Macaca_nemestrina
ENSBTAG00000023752	-	100	68.459	ENSMLEG00000032667	PABPN1L	100	68.459	Mandrillus_leucophaeus
ENSBTAG00000023752	-	100	62.366	ENSMAUG00000014032	Pabpn1l	100	62.007	Mesocricetus_auratus
ENSBTAG00000023752	-	100	68.345	ENSMICG00000028179	PABPN1L	100	67.384	Microcebus_murinus
ENSBTAG00000023752	-	100	63.082	ENSMOCG00000007955	Pabpn1l	100	62.724	Microtus_ochrogaster
ENSBTAG00000023752	-	100	48.227	ENSMODG00000003873	-	87	47.541	Monodelphis_domestica
ENSBTAG00000023752	-	100	63.799	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	62.724	Mus_caroli
ENSBTAG00000023752	-	100	63.799	ENSMUSG00000069867	Pabpn1l	100	62.724	Mus_musculus
ENSBTAG00000023752	-	100	64.516	MGP_PahariEiJ_G0023268	Pabpn1l	100	63.441	Mus_pahari
ENSBTAG00000023752	-	100	63.441	MGP_SPRETEiJ_G0032788	Pabpn1l	100	62.366	Mus_spretus
ENSBTAG00000023752	-	96	54.676	ENSMLUG00000003228	PABPN1L	84	57.613	Myotis_lucifugus
ENSBTAG00000023752	-	100	68.817	ENSNGAG00000023992	Pabpn1l	100	67.384	Nannospalax_galili
ENSBTAG00000023752	-	100	66.192	ENSOPRG00000005597	PABPN1L	100	65.836	Ochotona_princeps
ENSBTAG00000023752	-	100	60.204	ENSODEG00000004649	PABPN1L	92	60.853	Octodon_degus
ENSBTAG00000023752	-	100	50.719	ENSOANG00000013901	PABPN1L	100	50.360	Ornithorhynchus_anatinus
ENSBTAG00000023752	-	60	47.826	ENSORLG00000026560	PABPN1L	62	47.826	Oryzias_latipes
ENSBTAG00000023752	-	60	47.826	ENSORLG00020015068	PABPN1L	62	47.826	Oryzias_latipes_hni
ENSBTAG00000023752	-	60	47.826	ENSORLG00015000397	PABPN1L	62	47.826	Oryzias_latipes_hsok
ENSBTAG00000023752	-	100	67.636	ENSOGAG00000000433	PABPN1L	100	66.182	Otolemur_garnettii
ENSBTAG00000023752	-	100	81.126	ENSOARG00000013682	PABPN1L	100	81.126	Ovis_aries
ENSBTAG00000023752	-	100	65.603	ENSPPAG00000028866	PABPN1L	100	65.603	Pan_paniscus
ENSBTAG00000023752	-	100	75.540	ENSPPRG00000015106	PABPN1L	100	74.007	Panthera_pardus
ENSBTAG00000023752	-	93	67.188	ENSPTIG00000015606	PABPN1L	99	65.217	Panthera_tigris_altaica
ENSBTAG00000023752	-	100	65.603	ENSPTRG00000031120	PABPN1L	100	65.603	Pan_troglodytes
ENSBTAG00000023752	-	100	67.384	ENSPANG00000026039	PABPN1L	100	67.384	Papio_anubis
ENSBTAG00000023752	-	69	51.500	ENSPSIG00000003404	PABPN1L	100	51.500	Pelodiscus_sinensis
ENSBTAG00000023752	-	100	65.233	ENSPEMG00000016624	Pabpn1l	100	64.875	Peromyscus_maniculatus_bairdii
ENSBTAG00000023752	-	100	66.071	ENSPPYG00000007655	PABPN1L	100	66.904	Pongo_abelii
ENSBTAG00000023752	-	100	68.345	ENSPCOG00000024077	PABPN1L	100	69.176	Propithecus_coquereli
ENSBTAG00000023752	-	100	73.214	ENSPVAG00000002716	PABPN1L	100	72.500	Pteropus_vampyrus
ENSBTAG00000023752	-	100	63.441	ENSRNOG00000029558	Pabpn1l	100	63.082	Rattus_norvegicus
ENSBTAG00000023752	-	100	67.742	ENSRBIG00000030740	PABPN1L	100	67.742	Rhinopithecus_bieti
ENSBTAG00000023752	-	99	66.906	ENSRROG00000035483	-	99	66.906	Rhinopithecus_roxellana
ENSBTAG00000023752	-	100	67.742	ENSRROG00000032240	-	100	67.742	Rhinopithecus_roxellana
ENSBTAG00000023752	-	100	62.409	ENSSBOG00000018410	PABPN1L	100	62.409	Saimiri_boliviensis_boliviensis
ENSBTAG00000023752	-	100	46.801	ENSSHAG00000010001	-	88	45.802	Sarcophilus_harrisii
ENSBTAG00000023752	-	62	44.379	ENSSMAG00000021348	PABPN1L	61	46.951	Scophthalmus_maximus
ENSBTAG00000023752	-	94	50.996	ENSSARG00000005178	-	97	50.628	Sorex_araneus
ENSBTAG00000023752	-	69	58.511	ENSSPUG00000007031	PABPN1L	84	56.614	Sphenodon_punctatus
ENSBTAG00000023752	-	100	75.185	ENSSSCG00000036367	PABPN1L	100	73.134	Sus_scrofa
ENSBTAG00000023752	-	57	46.203	ENSTRUG00000024725	PABPN1L	70	47.561	Takifugu_rubripes
ENSBTAG00000023752	-	100	77.978	ENSTTRG00000004691	PABPN1L	100	77.978	Tursiops_truncatus
ENSBTAG00000023752	-	58	45.402	ENSXETG00000011258	pabpn1l	86	45.312	Xenopus_tropicalis