EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000023797 (Gene tree)
Gene ID: 618320
Gene Symbol: PRDM12
Alias: -
Full Name: Bos taurus PR/SET domain 12 (PRDM12)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 14899 bases
Position: chr11:100951292-100966190
Accession: NM_001206295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000032579	zf-C2H2	PF00096.26	1.1e-12	1	2
ENSBTAP00000032579	zf-C2H2	PF00096.26	1.1e-12	2	2
ENSBTAP00000032579	zf-met	PF12874.7	9.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000032650	-	1086	-	ENSBTAP00000032579	361 (aa)	-	E1B9X9

Gene Model

Click here to download ENSBTAG00000023797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000023797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000023797	PRDM12	81	30.199	ENSBTAG00000000060	PRDM14	59	39.189
ENSBTAG00000023797	PRDM12	69	42.353	ENSBTAG00000012111	PRDM5	90	42.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000023797	PRDM12	100	97.275	ENSG00000130711	PRDM12	100	97.275	Homo_sapiens
ENSBTAG00000023797	PRDM12	99	75.260	ENSAPOG00000016051	prdm12b	90	80.870	Acanthochromis_polyacanthus
ENSBTAG00000023797	PRDM12	99	64.560	ENSAPOG00000018234	-	93	66.860	Acanthochromis_polyacanthus
ENSBTAG00000023797	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSBTAG00000023797	PRDM12	99	75.907	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSBTAG00000023797	PRDM12	99	75.798	ENSACIG00000019578	prdm12b	93	79.943	Amphilophus_citrinellus
ENSBTAG00000023797	PRDM12	99	76.316	ENSAOCG00000015040	prdm12b	92	80.571	Amphiprion_ocellaris
ENSBTAG00000023797	PRDM12	90	79.464	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSBTAG00000023797	PRDM12	99	76.923	ENSAPEG00000015092	prdm12b	92	81.268	Amphiprion_percula
ENSBTAG00000023797	PRDM12	93	80.994	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSBTAG00000023797	PRDM12	94	99.118	ENSANAG00000020616	PRDM12	100	99.118	Aotus_nancymaae
ENSBTAG00000023797	PRDM12	99	78.512	ENSACLG00000011876	prdm12b	92	82.440	Astatotilapia_calliptera
ENSBTAG00000023797	PRDM12	90	81.871	ENSACLG00000007631	-	87	81.871	Astatotilapia_calliptera
ENSBTAG00000023797	PRDM12	99	78.889	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSBTAG00000023797	PRDM12	99	82.973	ENSAMXG00000033665	prdm12b	90	88.323	Astyanax_mexicanus
ENSBTAG00000023797	PRDM12	100	98.892	ENSCJAG00000020540	PRDM12	100	98.892	Callithrix_jacchus
ENSBTAG00000023797	PRDM12	88	97.819	ENSCAFG00000023076	PRDM12	99	97.819	Canis_familiaris
ENSBTAG00000023797	PRDM12	100	98.901	ENSCAFG00020024046	PRDM12	100	98.901	Canis_lupus_dingo
ENSBTAG00000023797	PRDM12	100	99.448	ENSCHIG00000025005	PRDM12	100	99.448	Capra_hircus
ENSBTAG00000023797	PRDM12	94	92.059	ENSCPOG00000005901	PRDM12	95	97.764	Cavia_porcellus
ENSBTAG00000023797	PRDM12	100	98.623	ENSCCAG00000037485	PRDM12	100	98.623	Cebus_capucinus
ENSBTAG00000023797	PRDM12	100	98.623	ENSCATG00000020327	PRDM12	100	98.623	Cercocebus_atys
ENSBTAG00000023797	PRDM12	93	97.605	ENSCLAG00000005499	PRDM12	92	97.605	Chinchilla_lanigera
ENSBTAG00000023797	PRDM12	100	98.352	ENSCSAG00000014756	PRDM12	100	98.352	Chlorocebus_sabaeus
ENSBTAG00000023797	PRDM12	100	90.028	ENSCPBG00000022628	PRDM12	94	93.114	Chrysemys_picta_bellii
ENSBTAG00000023797	PRDM12	100	98.087	ENSCGRG00001015005	Prdm12	100	98.087	Cricetulus_griseus_chok1gshd
ENSBTAG00000023797	PRDM12	99	72.821	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSBTAG00000023797	PRDM12	99	77.898	ENSCVAG00000017166	prdm12b	92	82.405	Cyprinodon_variegatus
ENSBTAG00000023797	PRDM12	99	82.038	ENSDARG00000007430	prdm12b	93	86.257	Danio_rerio
ENSBTAG00000023797	PRDM12	99	98.615	ENSDNOG00000042302	PRDM12	99	98.615	Dasypus_novemcinctus
ENSBTAG00000023797	PRDM12	89	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSBTAG00000023797	PRDM12	100	99.171	ENSEASG00005008472	PRDM12	100	99.171	Equus_asinus_asinus
ENSBTAG00000023797	PRDM12	100	98.895	ENSECAG00000005933	PRDM12	100	98.895	Equus_caballus
ENSBTAG00000023797	PRDM12	99	81.016	ENSELUG00000009905	prdm12b	91	85.714	Esox_lucius
ENSBTAG00000023797	PRDM12	99	76.944	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSBTAG00000023797	PRDM12	100	99.174	ENSFCAG00000043086	PRDM12	100	99.174	Felis_catus
ENSBTAG00000023797	PRDM12	100	90.305	ENSFALG00000001445	PRDM12	84	93.413	Ficedula_albicollis
ENSBTAG00000023797	PRDM12	99	77.005	ENSFHEG00000003944	prdm12b	92	81.395	Fundulus_heteroclitus
ENSBTAG00000023797	PRDM12	99	73.846	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSBTAG00000023797	PRDM12	92	82.282	ENSGMOG00000011797	prdm12b	94	82.282	Gadus_morhua
ENSBTAG00000023797	PRDM12	100	90.305	ENSGALG00000003895	PRDM12	94	93.413	Gallus_gallus
ENSBTAG00000023797	PRDM12	100	77.067	ENSGAFG00000010827	prdm12b	90	82.301	Gambusia_affinis
ENSBTAG00000023797	PRDM12	100	78.763	ENSGACG00000016713	prdm12b	91	83.728	Gasterosteus_aculeatus
ENSBTAG00000023797	PRDM12	100	90.305	ENSGAGG00000014083	PRDM12	94	93.413	Gopherus_agassizii
ENSBTAG00000023797	PRDM12	100	97.268	ENSGGOG00000010568	PRDM12	100	97.268	Gorilla_gorilla
ENSBTAG00000023797	PRDM12	90	81.871	ENSHBUG00000022537	-	80	81.871	Haplochromis_burtoni
ENSBTAG00000023797	PRDM12	99	77.005	ENSHBUG00000022878	prdm12b	93	80.692	Haplochromis_burtoni
ENSBTAG00000023797	PRDM12	100	95.890	ENSHGLG00000013939	PRDM12	100	95.890	Heterocephalus_glaber_female
ENSBTAG00000023797	PRDM12	99	73.569	ENSHCOG00000021167	-	95	76.176	Hippocampus_comes
ENSBTAG00000023797	PRDM12	90	80.994	ENSHCOG00000003663	prdm12b	89	79.656	Hippocampus_comes
ENSBTAG00000023797	PRDM12	99	76.099	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSBTAG00000023797	PRDM12	99	82.703	ENSIPUG00000017053	prdm12b	91	87.425	Ictalurus_punctatus
ENSBTAG00000023797	PRDM12	99	95.251	ENSSTOG00000005986	PRDM12	87	99.102	Ictidomys_tridecemlineatus
ENSBTAG00000023797	PRDM12	91	98.788	ENSJJAG00000005424	Prdm12	100	98.788	Jaculus_jaculus
ENSBTAG00000023797	PRDM12	99	76.648	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSBTAG00000023797	PRDM12	91	78.212	ENSKMAG00000016921	prdm12b	89	78.492	Kryptolebias_marmoratus
ENSBTAG00000023797	PRDM12	99	77.249	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSBTAG00000023797	PRDM12	99	74.870	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSBTAG00000023797	PRDM12	99	87.500	ENSLACG00000017560	PRDM12	94	90.390	Latimeria_chalumnae
ENSBTAG00000023797	PRDM12	99	82.787	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSBTAG00000023797	PRDM12	96	98.011	ENSLAFG00000006979	PRDM12	94	98.011	Loxodonta_africana
ENSBTAG00000023797	PRDM12	100	96.458	ENSMFAG00000040322	PRDM12	100	96.458	Macaca_fascicularis
ENSBTAG00000023797	PRDM12	100	98.623	ENSMNEG00000037234	PRDM12	100	98.623	Macaca_nemestrina
ENSBTAG00000023797	PRDM12	99	76.579	ENSMAMG00000013212	prdm12b	90	83.383	Mastacembelus_armatus
ENSBTAG00000023797	PRDM12	90	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSBTAG00000023797	PRDM12	90	81.871	ENSMZEG00005000415	PRDM12	86	81.871	Maylandia_zebra
ENSBTAG00000023797	PRDM12	98	90.704	ENSMGAG00000005438	PRDM12	94	93.413	Meleagris_gallopavo
ENSBTAG00000023797	PRDM12	100	96.986	ENSMAUG00000013040	Prdm12	100	96.986	Mesocricetus_auratus
ENSBTAG00000023797	PRDM12	100	98.619	ENSMICG00000015480	PRDM12	100	98.619	Microcebus_murinus
ENSBTAG00000023797	PRDM12	98	96.875	ENSMOCG00000021026	Prdm12	93	99.123	Microtus_ochrogaster
ENSBTAG00000023797	PRDM12	100	92.244	ENSMODG00000012108	PRDM12	94	95.509	Monodelphis_domestica
ENSBTAG00000023797	PRDM12	99	66.846	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSBTAG00000023797	PRDM12	100	98.082	MGP_CAROLIEiJ_G0023414	Prdm12	100	98.082	Mus_caroli
ENSBTAG00000023797	PRDM12	100	98.082	ENSMUSG00000079466	Prdm12	100	98.082	Mus_musculus
ENSBTAG00000023797	PRDM12	100	98.082	MGP_PahariEiJ_G0024871	Prdm12	100	98.082	Mus_pahari
ENSBTAG00000023797	PRDM12	100	98.082	MGP_SPRETEiJ_G0024331	Prdm12	100	98.082	Mus_spretus
ENSBTAG00000023797	PRDM12	100	95.291	ENSNGAG00000018480	Prdm12	100	95.291	Nannospalax_galili
ENSBTAG00000023797	PRDM12	99	76.393	ENSNBRG00000006727	prdm12b	93	80.000	Neolamprologus_brichardi
ENSBTAG00000023797	PRDM12	99	73.046	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSBTAG00000023797	PRDM12	100	81.994	ENSMEUG00000003828	PRDM12	94	84.431	Notamacropus_eugenii
ENSBTAG00000023797	PRDM12	91	98.485	ENSOPRG00000008680	PRDM12	100	98.485	Ochotona_princeps
ENSBTAG00000023797	PRDM12	95	97.959	ENSODEG00000016282	PRDM12	64	97.959	Octodon_degus
ENSBTAG00000023797	PRDM12	62	90.625	ENSOANG00000001043	PRDM12	91	96.447	Ornithorhynchus_anatinus
ENSBTAG00000023797	PRDM12	87	93.291	ENSOCUG00000008241	PRDM12	98	94.426	Oryctolagus_cuniculus
ENSBTAG00000023797	PRDM12	99	77.807	ENSORLG00000007114	prdm12b	92	81.556	Oryzias_latipes
ENSBTAG00000023797	PRDM12	90	79.765	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSBTAG00000023797	PRDM12	91	80.980	ENSORLG00020019565	prdm12b	91	81.268	Oryzias_latipes_hni
ENSBTAG00000023797	PRDM12	90	79.532	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSBTAG00000023797	PRDM12	100	75.989	ENSORLG00015007621	prdm12b	92	81.322	Oryzias_latipes_hsok
ENSBTAG00000023797	PRDM12	90	79.765	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSBTAG00000023797	PRDM12	99	74.413	ENSOMEG00000007762	-	94	78.632	Oryzias_melastigma
ENSBTAG00000023797	PRDM12	100	75.389	ENSOMEG00000004134	prdm12b	91	80.571	Oryzias_melastigma
ENSBTAG00000023797	PRDM12	92	99.700	ENSOGAG00000007557	PRDM12	100	99.700	Otolemur_garnettii
ENSBTAG00000023797	PRDM12	80	98.258	ENSPPAG00000031506	-	97	98.258	Pan_paniscus
ENSBTAG00000023797	PRDM12	100	87.845	ENSPPRG00000023024	PRDM12	86	90.746	Panthera_pardus
ENSBTAG00000023797	PRDM12	100	97.541	ENSPTRG00000021475	PRDM12	100	97.541	Pan_troglodytes
ENSBTAG00000023797	PRDM12	100	97.541	ENSPTRG00000043324	-	100	97.541	Pan_troglodytes
ENSBTAG00000023797	PRDM12	100	98.623	ENSPANG00000025967	PRDM12	100	98.623	Papio_anubis
ENSBTAG00000023797	PRDM12	99	82.133	ENSPKIG00000007228	prdm12b	94	85.632	Paramormyrops_kingsleyae
ENSBTAG00000023797	PRDM12	94	78.348	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSBTAG00000023797	PRDM12	100	89.474	ENSPSIG00000006739	PRDM12	94	92.515	Pelodiscus_sinensis
ENSBTAG00000023797	PRDM12	99	73.438	ENSPMGG00000002356	-	88	80.952	Periophthalmus_magnuspinnatus
ENSBTAG00000023797	PRDM12	100	77.719	ENSPMGG00000008867	prdm12b	92	82.799	Periophthalmus_magnuspinnatus
ENSBTAG00000023797	PRDM12	96	96.254	ENSPEMG00000009969	Prdm12	91	99.398	Peromyscus_maniculatus_bairdii
ENSBTAG00000023797	PRDM12	100	92.521	ENSPCIG00000024119	PRDM12	94	95.808	Phascolarctos_cinereus
ENSBTAG00000023797	PRDM12	99	78.016	ENSPFOG00000019841	prdm12b	93	81.924	Poecilia_formosa
ENSBTAG00000023797	PRDM12	91	83.036	ENSPLAG00000016626	prdm12b	90	82.596	Poecilia_latipinna
ENSBTAG00000023797	PRDM12	89	82.067	ENSPMEG00000016698	prdm12b	89	82.067	Poecilia_mexicana
ENSBTAG00000023797	PRDM12	91	82.891	ENSPREG00000015073	prdm12b	89	82.456	Poecilia_reticulata
ENSBTAG00000023797	PRDM12	96	74.095	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSBTAG00000023797	PRDM12	97	96.866	ENSPPYG00000019694	PRDM12	100	96.866	Pongo_abelii
ENSBTAG00000023797	PRDM12	100	98.087	ENSPCOG00000022255	PRDM12	100	98.087	Propithecus_coquereli
ENSBTAG00000023797	PRDM12	100	97.268	ENSPVAG00000001511	PRDM12	100	97.268	Pteropus_vampyrus
ENSBTAG00000023797	PRDM12	99	76.330	ENSPNYG00000009607	prdm12b	93	79.943	Pundamilia_nyererei
ENSBTAG00000023797	PRDM12	90	81.871	ENSPNYG00000013589	-	86	81.871	Pundamilia_nyererei
ENSBTAG00000023797	PRDM12	99	74.731	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSBTAG00000023797	PRDM12	99	83.696	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSBTAG00000023797	PRDM12	100	98.082	ENSRNOG00000009218	Prdm12	100	98.082	Rattus_norvegicus
ENSBTAG00000023797	PRDM12	88	99.054	ENSRBIG00000042712	PRDM12	91	96.657	Rhinopithecus_bieti
ENSBTAG00000023797	PRDM12	89	99.065	ENSRROG00000043554	PRDM12	100	99.065	Rhinopithecus_roxellana
ENSBTAG00000023797	PRDM12	100	92.265	ENSSHAG00000015972	PRDM12	94	95.522	Sarcophilus_harrisii
ENSBTAG00000023797	PRDM12	99	74.550	ENSSMAG00000003754	prdm12b	90	80.627	Scophthalmus_maximus
ENSBTAG00000023797	PRDM12	99	75.781	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSBTAG00000023797	PRDM12	94	81.395	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSBTAG00000023797	PRDM12	99	76.378	ENSSLDG00000009557	prdm12b	90	82.216	Seriola_lalandi_dorsalis
ENSBTAG00000023797	PRDM12	99	79.063	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSBTAG00000023797	PRDM12	100	89.751	ENSSPUG00000013424	PRDM12	94	92.814	Sphenodon_punctatus
ENSBTAG00000023797	PRDM12	90	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSBTAG00000023797	PRDM12	99	76.115	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSBTAG00000023797	PRDM12	100	98.901	ENSSSCG00000005703	PRDM12	100	98.901	Sus_scrofa
ENSBTAG00000023797	PRDM12	99	76.087	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSBTAG00000023797	PRDM12	99	77.867	ENSTRUG00000018659	prdm12b	92	82.405	Takifugu_rubripes
ENSBTAG00000023797	PRDM12	99	78.191	ENSTNIG00000009020	prdm12b	91	83.481	Tetraodon_nigroviridis
ENSBTAG00000023797	PRDM12	99	76.438	ENSTNIG00000005859	-	92	81.155	Tetraodon_nigroviridis
ENSBTAG00000023797	PRDM12	97	98.854	ENSUAMG00000009653	PRDM12	97	98.854	Ursus_americanus
ENSBTAG00000023797	PRDM12	92	99.699	ENSVVUG00000027662	PRDM12	79	99.699	Vulpes_vulpes
ENSBTAG00000023797	PRDM12	100	77.748	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSBTAG00000023797	PRDM12	99	72.265	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSBTAG00000023797	PRDM12	99	77.333	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus