EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000023867 (Gene tree)
Gene ID: 783330
Gene Symbol: RC3H2
Alias: -
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 54764 bases
Position: chr11:94013635-94068398
Accession: 33819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060760	zf-CCCH	PF00642.24	1.8e-06	1	1
ENSBTAP00000032718	zf-CCCH	PF00642.24	1.9e-06	1	1
ENSBTAP00000058016	zf-CCCH	PF00642.24	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000032789	-	4006	XM_010810365	ENSBTAP00000032718	1189 (aa)	XP_010808664	E1BP22
ENSBTAT00000075508	-	3835	-	ENSBTAP00000058016	1132 (aa)	XP_010808666	UPI000575E5BA
ENSBTAT00000079076	-	3772	-	ENSBTAP00000060760	1111 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000023867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000023867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000023867	RC3H2	87	54.639	ENSBTAG00000052708	RC3H1	91	54.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000023867	RC3H2	100	97.229	ENSG00000056586	RC3H2	100	97.229	Homo_sapiens
ENSBTAG00000023867	RC3H2	92	56.981	ENSAPOG00000002117	rc3h2	93	56.693	Acanthochromis_polyacanthus
ENSBTAG00000023867	RC3H2	100	98.489	ENSAMEG00000006498	RC3H2	100	98.489	Ailuropoda_melanoleuca
ENSBTAG00000023867	RC3H2	92	57.330	ENSAPEG00000007757	rc3h2	93	57.043	Amphiprion_percula
ENSBTAG00000023867	RC3H2	91	56.852	ENSATEG00000019414	rc3h2	91	56.637	Anabas_testudineus
ENSBTAG00000023867	RC3H2	100	90.947	ENSAPLG00000013920	RC3H2	100	90.947	Anas_platyrhynchos
ENSBTAG00000023867	RC3H2	100	97.313	ENSANAG00000030862	RC3H2	100	97.313	Aotus_nancymaae
ENSBTAG00000023867	RC3H2	90	65.217	ENSACLG00000023136	rc3h2	88	65.217	Astatotilapia_calliptera
ENSBTAG00000023867	RC3H2	80	58.932	ENSAMXG00000006778	rc3h2	93	55.492	Astyanax_mexicanus
ENSBTAG00000023867	RC3H2	100	97.313	ENSCJAG00000020050	RC3H2	100	97.313	Callithrix_jacchus
ENSBTAG00000023867	RC3H2	100	98.150	ENSCAFG00020015288	RC3H2	100	98.150	Canis_lupus_dingo
ENSBTAG00000023867	RC3H2	100	99.579	ENSCHIG00000019319	RC3H2	100	99.579	Capra_hircus
ENSBTAG00000023867	RC3H2	83	82.801	ENSCAPG00000017086	RC3H2	93	82.801	Cavia_aperea
ENSBTAG00000023867	RC3H2	100	96.888	ENSCPOG00000008511	RC3H2	100	96.888	Cavia_porcellus
ENSBTAG00000023867	RC3H2	100	97.225	ENSCCAG00000001404	RC3H2	100	97.225	Cebus_capucinus
ENSBTAG00000023867	RC3H2	100	97.481	ENSCATG00000036655	RC3H2	100	97.481	Cercocebus_atys
ENSBTAG00000023867	RC3H2	100	97.140	ENSCLAG00000013261	RC3H2	100	97.140	Chinchilla_lanigera
ENSBTAG00000023867	RC3H2	90	97.097	ENSCSAG00000013416	RC3H2	100	97.269	Chlorocebus_sabaeus
ENSBTAG00000023867	RC3H2	100	89.774	ENSCPBG00000009811	RC3H2	100	89.774	Chrysemys_picta_bellii
ENSBTAG00000023867	RC3H2	100	97.565	ENSCANG00000043140	RC3H2	100	97.565	Colobus_angolensis_palliatus
ENSBTAG00000023867	RC3H2	100	94.701	ENSCGRG00001010006	Rc3h2	100	94.113	Cricetulus_griseus_chok1gshd
ENSBTAG00000023867	RC3H2	90	95.360	ENSCGRG00000009255	Rc3h2	100	94.505	Cricetulus_griseus_crigri
ENSBTAG00000023867	RC3H2	90	55.359	ENSCSEG00000017460	rc3h2	96	55.674	Cynoglossus_semilaevis
ENSBTAG00000023867	RC3H2	91	56.256	ENSCVAG00000012202	rc3h2	91	56.216	Cyprinodon_variegatus
ENSBTAG00000023867	RC3H2	91	54.886	ENSDARG00000063050	rc3h2	96	54.927	Danio_rerio
ENSBTAG00000023867	RC3H2	100	96.888	ENSDNOG00000014557	RC3H2	100	96.888	Dasypus_novemcinctus
ENSBTAG00000023867	RC3H2	100	96.720	ENSDORG00000006398	Rc3h2	100	96.720	Dipodomys_ordii
ENSBTAG00000023867	RC3H2	100	95.542	ENSEASG00005020897	RC3H2	100	95.542	Equus_asinus_asinus
ENSBTAG00000023867	RC3H2	100	98.570	ENSECAG00000022176	RC3H2	100	98.570	Equus_caballus
ENSBTAG00000023867	RC3H2	91	57.828	ENSELUG00000006105	rc3h2	93	57.337	Esox_lucius
ENSBTAG00000023867	RC3H2	100	98.498	ENSFCAG00000007375	RC3H2	100	98.498	Felis_catus
ENSBTAG00000023867	RC3H2	100	91.031	ENSFALG00000002011	RC3H2	100	91.031	Ficedula_albicollis
ENSBTAG00000023867	RC3H2	100	97.477	ENSFDAG00000012477	RC3H2	100	97.477	Fukomys_damarensis
ENSBTAG00000023867	RC3H2	92	55.605	ENSFHEG00000012272	rc3h2	93	55.644	Fundulus_heteroclitus
ENSBTAG00000023867	RC3H2	69	52.718	ENSGMOG00000016709	-	100	52.212	Gadus_morhua
ENSBTAG00000023867	RC3H2	100	90.947	ENSGALG00000001253	RC3H2	100	90.947	Gallus_gallus
ENSBTAG00000023867	RC3H2	92	55.368	ENSGAFG00000007679	rc3h2	96	55.240	Gambusia_affinis
ENSBTAG00000023867	RC3H2	70	59.447	ENSGACG00000017369	rc3h2	100	87.104	Gasterosteus_aculeatus
ENSBTAG00000023867	RC3H2	100	89.774	ENSGAGG00000018295	RC3H2	100	89.774	Gopherus_agassizii
ENSBTAG00000023867	RC3H2	100	97.397	ENSGGOG00000017062	RC3H2	100	97.397	Gorilla_gorilla
ENSBTAG00000023867	RC3H2	91	57.092	ENSHBUG00000003976	rc3h2	93	55.922	Haplochromis_burtoni
ENSBTAG00000023867	RC3H2	100	97.227	ENSHGLG00100018015	RC3H2	100	97.227	Heterocephalus_glaber_male
ENSBTAG00000023867	RC3H2	80	58.617	ENSHCOG00000003006	rc3h2	87	58.103	Hippocampus_comes
ENSBTAG00000023867	RC3H2	81	56.205	ENSIPUG00000021433	rc3h2	90	57.128	Ictalurus_punctatus
ENSBTAG00000023867	RC3H2	100	97.813	ENSSTOG00000010655	RC3H2	100	97.813	Ictidomys_tridecemlineatus
ENSBTAG00000023867	RC3H2	100	96.641	ENSJJAG00000022376	Rc3h2	100	96.641	Jaculus_jaculus
ENSBTAG00000023867	RC3H2	91	56.924	ENSKMAG00000010936	rc3h2	98	54.090	Kryptolebias_marmoratus
ENSBTAG00000023867	RC3H2	93	61.826	ENSLOCG00000002894	rc3h2	94	62.216	Lepisosteus_oculatus
ENSBTAG00000023867	RC3H2	100	96.299	ENSLAFG00000003521	RC3H2	100	96.299	Loxodonta_africana
ENSBTAG00000023867	RC3H2	100	97.481	ENSMFAG00000035621	RC3H2	100	97.481	Macaca_fascicularis
ENSBTAG00000023867	RC3H2	100	97.481	ENSMMUG00000021134	RC3H2	100	97.481	Macaca_mulatta
ENSBTAG00000023867	RC3H2	100	97.481	ENSMNEG00000031599	RC3H2	100	97.481	Macaca_nemestrina
ENSBTAG00000023867	RC3H2	96	96.582	ENSMLEG00000033809	RC3H2	99	96.582	Mandrillus_leucophaeus
ENSBTAG00000023867	RC3H2	91	56.800	ENSMZEG00005017019	rc3h2	93	55.625	Maylandia_zebra
ENSBTAG00000023867	RC3H2	100	90.879	ENSMGAG00000007984	RC3H2	100	90.879	Meleagris_gallopavo
ENSBTAG00000023867	RC3H2	88	90.591	ENSMAUG00000003117	Rc3h2	94	90.591	Mesocricetus_auratus
ENSBTAG00000023867	RC3H2	100	97.393	ENSMICG00000003227	RC3H2	100	97.393	Microcebus_murinus
ENSBTAG00000023867	RC3H2	100	95.458	ENSMOCG00000009592	Rc3h2	100	95.458	Microtus_ochrogaster
ENSBTAG00000023867	RC3H2	71	87.305	ENSMMOG00000021305	rc3h2	90	87.305	Mola_mola
ENSBTAG00000023867	RC3H2	94	94.385	ENSMODG00000019725	RC3H2	79	94.385	Monodelphis_domestica
ENSBTAG00000023867	RC3H2	100	92.935	MGP_CAROLIEiJ_G0023516	Rc3h2	95	99.117	Mus_caroli
ENSBTAG00000023867	RC3H2	100	95.038	ENSMUSG00000075376	Rc3h2	100	95.038	Mus_musculus
ENSBTAG00000023867	RC3H2	100	95.458	MGP_PahariEiJ_G0024969	Rc3h2	100	95.458	Mus_pahari
ENSBTAG00000023867	RC3H2	100	95.290	MGP_SPRETEiJ_G0024436	Rc3h2	100	95.290	Mus_spretus
ENSBTAG00000023867	RC3H2	100	97.981	ENSMPUG00000014141	RC3H2	100	97.981	Mustela_putorius_furo
ENSBTAG00000023867	RC3H2	100	96.975	ENSMLUG00000013992	RC3H2	100	96.975	Myotis_lucifugus
ENSBTAG00000023867	RC3H2	91	56.915	ENSNBRG00000009276	rc3h2	93	55.744	Neolamprologus_brichardi
ENSBTAG00000023867	RC3H2	100	96.306	ENSNLEG00000017204	RC3H2	100	96.306	Nomascus_leucogenys
ENSBTAG00000023867	RC3H2	60	99.209	ENSMEUG00000001299	-	71	99.209	Notamacropus_eugenii
ENSBTAG00000023867	RC3H2	82	92.658	ENSOPRG00000000135	RC3H2	93	92.658	Ochotona_princeps
ENSBTAG00000023867	RC3H2	90	65.217	ENSONIG00000003945	rc3h2	100	59.037	Oreochromis_niloticus
ENSBTAG00000023867	RC3H2	90	93.611	ENSOANG00000008194	RC3H2	100	93.611	Ornithorhynchus_anatinus
ENSBTAG00000023867	RC3H2	100	97.645	ENSOCUG00000008804	RC3H2	100	97.645	Oryctolagus_cuniculus
ENSBTAG00000023867	RC3H2	91	56.356	ENSORLG00000010018	rc3h2	92	56.228	Oryzias_latipes
ENSBTAG00000023867	RC3H2	91	56.584	ENSORLG00020013257	rc3h2	92	56.456	Oryzias_latipes_hni
ENSBTAG00000023867	RC3H2	91	56.584	ENSORLG00015001525	rc3h2	92	56.456	Oryzias_latipes_hsok
ENSBTAG00000023867	RC3H2	92	56.349	ENSOMEG00000023540	rc3h2	93	56.173	Oryzias_melastigma
ENSBTAG00000023867	RC3H2	100	96.893	ENSOGAG00000010678	RC3H2	100	96.893	Otolemur_garnettii
ENSBTAG00000023867	RC3H2	100	99.496	ENSOARG00000013965	RC3H2	100	99.496	Ovis_aries
ENSBTAG00000023867	RC3H2	100	97.313	ENSPPAG00000036013	RC3H2	100	97.313	Pan_paniscus
ENSBTAG00000023867	RC3H2	100	98.405	ENSPPRG00000008698	RC3H2	100	98.405	Panthera_pardus
ENSBTAG00000023867	RC3H2	100	98.405	ENSPTIG00000014257	RC3H2	100	98.405	Panthera_tigris_altaica
ENSBTAG00000023867	RC3H2	100	97.313	ENSPTRG00000021339	RC3H2	100	97.313	Pan_troglodytes
ENSBTAG00000023867	RC3H2	100	95.718	ENSPANG00000025840	RC3H2	100	95.718	Papio_anubis
ENSBTAG00000023867	RC3H2	93	60.823	ENSPKIG00000021910	rc3h2	90	60.465	Paramormyrops_kingsleyae
ENSBTAG00000023867	RC3H2	100	90.025	ENSPSIG00000005393	RC3H2	100	90.025	Pelodiscus_sinensis
ENSBTAG00000023867	RC3H2	76	86.199	ENSPMGG00000023963	rc3h2	94	86.682	Periophthalmus_magnuspinnatus
ENSBTAG00000023867	RC3H2	100	95.206	ENSPEMG00000023441	Rc3h2	100	95.206	Peromyscus_maniculatus_bairdii
ENSBTAG00000023867	RC3H2	100	93.668	ENSPCIG00000025559	RC3H2	100	93.668	Phascolarctos_cinereus
ENSBTAG00000023867	RC3H2	91	54.391	ENSPFOG00000019699	rc3h2	100	58.008	Poecilia_formosa
ENSBTAG00000023867	RC3H2	80	59.784	ENSPLAG00000005799	rc3h2	90	62.850	Poecilia_latipinna
ENSBTAG00000023867	RC3H2	92	54.433	ENSPMEG00000014187	rc3h2	93	54.699	Poecilia_mexicana
ENSBTAG00000023867	RC3H2	92	54.521	ENSPREG00000008979	rc3h2	92	54.610	Poecilia_reticulata
ENSBTAG00000023867	RC3H2	86	100.000	ENSPCAG00000010154	RC3H2	82	100.000	Procavia_capensis
ENSBTAG00000023867	RC3H2	90	65.217	ENSPNYG00000012063	rc3h2	88	65.217	Pundamilia_nyererei
ENSBTAG00000023867	RC3H2	82	58.716	ENSPNAG00000017502	rc3h2	88	58.940	Pygocentrus_nattereri
ENSBTAG00000023867	RC3H2	100	95.206	ENSRNOG00000009196	Rc3h2	100	95.206	Rattus_norvegicus
ENSBTAG00000023867	RC3H2	95	97.511	ENSRBIG00000032579	RC3H2	100	97.511	Rhinopithecus_bieti
ENSBTAG00000023867	RC3H2	100	97.561	ENSRROG00000043784	RC3H2	100	97.561	Rhinopithecus_roxellana
ENSBTAG00000023867	RC3H2	100	97.145	ENSSBOG00000029100	RC3H2	100	97.145	Saimiri_boliviensis_boliviensis
ENSBTAG00000023867	RC3H2	100	93.395	ENSSHAG00000007498	RC3H2	100	93.395	Sarcophilus_harrisii
ENSBTAG00000023867	RC3H2	91	56.572	ENSSMAG00000020048	rc3h2	93	56.288	Scophthalmus_maximus
ENSBTAG00000023867	RC3H2	92	56.667	ENSSDUG00000016022	rc3h2	93	56.804	Seriola_dumerili
ENSBTAG00000023867	RC3H2	92	56.469	ENSSLDG00000016070	rc3h2	93	56.442	Seriola_lalandi_dorsalis
ENSBTAG00000023867	RC3H2	100	95.886	ENSSARG00000012329	RC3H2	100	95.886	Sorex_araneus
ENSBTAG00000023867	RC3H2	100	87.876	ENSSPUG00000001457	RC3H2	100	87.876	Sphenodon_punctatus
ENSBTAG00000023867	RC3H2	92	56.719	ENSSPAG00000005233	rc3h2	93	56.518	Stegastes_partitus
ENSBTAG00000023867	RC3H2	100	98.151	ENSSSCG00000005575	RC3H2	100	98.151	Sus_scrofa
ENSBTAG00000023867	RC3H2	100	91.031	ENSTGUG00000006889	-	100	91.031	Taeniopygia_guttata
ENSBTAG00000023867	RC3H2	81	58.693	ENSTNIG00000004942	rc3h2	100	58.492	Tetraodon_nigroviridis
ENSBTAG00000023867	RC3H2	75	100.000	ENSTBEG00000009622	RC3H2	86	100.000	Tupaia_belangeri
ENSBTAG00000023867	RC3H2	99	99.334	ENSTTRG00000016954	RC3H2	94	99.334	Tursiops_truncatus
ENSBTAG00000023867	RC3H2	100	98.654	ENSUAMG00000015355	RC3H2	100	98.654	Ursus_americanus
ENSBTAG00000023867	RC3H2	100	98.654	ENSUMAG00000003161	RC3H2	100	98.654	Ursus_maritimus
ENSBTAG00000023867	RC3H2	100	98.069	ENSVPAG00000005994	RC3H2	100	98.069	Vicugna_pacos
ENSBTAG00000023867	RC3H2	100	97.981	ENSVVUG00000009519	RC3H2	100	97.981	Vulpes_vulpes
ENSBTAG00000023867	RC3H2	81	58.342	ENSXCOG00000005002	rc3h2	94	87.075	Xiphophorus_couchianus
ENSBTAG00000023867	RC3H2	91	55.476	ENSXMAG00000001724	rc3h2	91	55.258	Xiphophorus_maculatus