EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000024027 (Gene tree)
Gene ID: 532418
Gene Symbol: TRMT10C
Alias: -
Full Name: Bos taurus tRNA methyltransferase 10C%2C mitochondrial RNase P subunit (TRMT10C)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 4226 bases
Position: chr1:45988289-45992514
Accession: NM_001046323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000033017	tRNA_m1G_MT	PF01746.21	7.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000033093	-	1677	XM_005201230	ENSBTAP00000033017	420 (aa)	XP_005201287	Q2KI45

Gene Model

Click here to download ENSBTAG00000024027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000024027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000024027	TRMT10C	95	80.952	ENSG00000174173	TRMT10C	99	80.952	Homo_sapiens
ENSBTAG00000024027	TRMT10C	57	30.769	ENSAPOG00000007362	trmt10b	54	34.239	Acanthochromis_polyacanthus
ENSBTAG00000024027	TRMT10C	55	57.759	ENSAPOG00000003883	trmt10c	66	57.759	Acanthochromis_polyacanthus
ENSBTAG00000024027	TRMT10C	98	82.567	ENSAMEG00000019657	TRMT10C	99	82.567	Ailuropoda_melanoleuca
ENSBTAG00000024027	TRMT10C	65	50.000	ENSACIG00000022244	trmt10c	82	50.000	Amphilophus_citrinellus
ENSBTAG00000024027	TRMT10C	56	54.622	ENSAOCG00000005855	trmt10c	70	54.545	Amphiprion_ocellaris
ENSBTAG00000024027	TRMT10C	57	31.174	ENSAOCG00000001205	trmt10b	61	34.239	Amphiprion_ocellaris
ENSBTAG00000024027	TRMT10C	57	30.769	ENSAPEG00000003675	trmt10b	59	34.239	Amphiprion_percula
ENSBTAG00000024027	TRMT10C	56	55.042	ENSAPEG00000021992	trmt10c	70	54.959	Amphiprion_percula
ENSBTAG00000024027	TRMT10C	88	48.663	ENSATEG00000012576	trmt10c	94	47.861	Anabas_testudineus
ENSBTAG00000024027	TRMT10C	80	52.161	ENSAPLG00000011561	TRMT10C	84	53.709	Anas_platyrhynchos
ENSBTAG00000024027	TRMT10C	85	55.956	ENSACAG00000011903	TRMT10C	82	55.125	Anolis_carolinensis
ENSBTAG00000024027	TRMT10C	95	45.521	ENSACLG00000024269	trmt10c	97	45.763	Astatotilapia_calliptera
ENSBTAG00000024027	TRMT10C	82	48.732	ENSAMXG00000014749	trmt10c	83	49.573	Astyanax_mexicanus
ENSBTAG00000024027	TRMT10C	98	79.126	ENSCAFG00000031607	TRMT10C	97	79.126	Canis_familiaris
ENSBTAG00000024027	TRMT10C	98	79.126	ENSCAFG00020008862	TRMT10C	97	79.126	Canis_lupus_dingo
ENSBTAG00000024027	TRMT10C	100	96.667	ENSCHIG00000021446	TRMT10C	99	96.667	Capra_hircus
ENSBTAG00000024027	TRMT10C	99	74.641	ENSCLAG00000017738	TRMT10C	99	74.641	Chinchilla_lanigera
ENSBTAG00000024027	TRMT10C	95	81.955	ENSCSAG00000018722	TRMT10C	99	81.955	Chlorocebus_sabaeus
ENSBTAG00000024027	TRMT10C	91	81.462	ENSCHOG00000010108	TRMT10C	98	81.462	Choloepus_hoffmanni
ENSBTAG00000024027	TRMT10C	98	71.325	ENSCGRG00001006603	Trmt10c	99	71.325	Cricetulus_griseus_chok1gshd
ENSBTAG00000024027	TRMT10C	98	71.325	ENSCGRG00000019728	Trmt10c	99	71.325	Cricetulus_griseus_crigri
ENSBTAG00000024027	TRMT10C	85	44.444	ENSCSEG00000006163	trmt10c	80	44.584	Cynoglossus_semilaevis
ENSBTAG00000024027	TRMT10C	86	48.062	ENSCVAG00000013751	trmt10c	77	48.320	Cyprinodon_variegatus
ENSBTAG00000024027	TRMT10C	79	50.298	ENSDARG00000041575	trmt10c	83	49.107	Danio_rerio
ENSBTAG00000024027	TRMT10C	99	74.641	ENSDNOG00000012650	TRMT10C	100	74.641	Dasypus_novemcinctus
ENSBTAG00000024027	TRMT10C	97	74.328	ENSDORG00000027529	Trmt10c	99	74.328	Dipodomys_ordii
ENSBTAG00000024027	TRMT10C	66	36.332	FBgn0034351	rswl	64	35.517	Drosophila_melanogaster
ENSBTAG00000024027	TRMT10C	76	36.677	ENSEBUG00000015332	trmt10c	86	34.066	Eptatretus_burgeri
ENSBTAG00000024027	TRMT10C	56	31.276	ENSEASG00005000696	TRMT10B	61	32.821	Equus_asinus_asinus
ENSBTAG00000024027	TRMT10C	98	88.049	ENSEASG00005011186	TRMT10C	97	88.049	Equus_asinus_asinus
ENSBTAG00000024027	TRMT10C	98	87.805	ENSECAG00000001533	TRMT10C	97	87.805	Equus_caballus
ENSBTAG00000024027	TRMT10C	56	31.276	ENSECAG00000022650	TRMT10B	61	32.821	Equus_caballus
ENSBTAG00000024027	TRMT10C	95	72.070	ENSEEUG00000004696	TRMT10C	99	71.571	Erinaceus_europaeus
ENSBTAG00000024027	TRMT10C	89	52.243	ENSELUG00000002553	trmt10c	88	52.243	Esox_lucius
ENSBTAG00000024027	TRMT10C	74	30.218	ENSFCAG00000035239	TRMT10B	87	32.821	Felis_catus
ENSBTAG00000024027	TRMT10C	98	83.212	ENSFCAG00000003430	TRMT10C	97	83.212	Felis_catus
ENSBTAG00000024027	TRMT10C	79	55.120	ENSFALG00000014236	TRMT10C	79	54.354	Ficedula_albicollis
ENSBTAG00000024027	TRMT10C	99	72.471	ENSFDAG00000001576	TRMT10C	99	72.471	Fukomys_damarensis
ENSBTAG00000024027	TRMT10C	78	50.427	ENSFHEG00000015379	trmt10c	69	50.427	Fundulus_heteroclitus
ENSBTAG00000024027	TRMT10C	78	52.439	ENSGMOG00000008573	trmt10c	95	51.064	Gadus_morhua
ENSBTAG00000024027	TRMT10C	80	52.874	ENSGALG00000015328	TRMT10C	80	54.438	Gallus_gallus
ENSBTAG00000024027	TRMT10C	63	53.383	ENSGAFG00000012256	trmt10c	78	54.724	Gambusia_affinis
ENSBTAG00000024027	TRMT10C	90	48.711	ENSGACG00000015281	trmt10c	95	48.196	Gasterosteus_aculeatus
ENSBTAG00000024027	TRMT10C	57	32.000	ENSGACG00000019076	trmt10b	68	33.831	Gasterosteus_aculeatus
ENSBTAG00000024027	TRMT10C	93	54.926	ENSGAGG00000022825	TRMT10C	95	54.926	Gopherus_agassizii
ENSBTAG00000024027	TRMT10C	95	80.702	ENSGGOG00000006484	TRMT10C	99	80.702	Gorilla_gorilla
ENSBTAG00000024027	TRMT10C	50	58.294	ENSHBUG00000000010	trmt10c	64	58.294	Haplochromis_burtoni
ENSBTAG00000024027	TRMT10C	97	74.510	ENSHGLG00000019767	TRMT10C	98	74.510	Heterocephalus_glaber_female
ENSBTAG00000024027	TRMT10C	97	74.510	ENSHGLG00100020191	TRMT10C	98	74.510	Heterocephalus_glaber_male
ENSBTAG00000024027	TRMT10C	53	55.357	ENSHCOG00000003493	trmt10c	82	55.357	Hippocampus_comes
ENSBTAG00000024027	TRMT10C	68	30.435	ENSIPUG00000008246	trmt10b	65	34.314	Ictalurus_punctatus
ENSBTAG00000024027	TRMT10C	98	46.065	ENSIPUG00000010010	trmt10c	88	46.065	Ictalurus_punctatus
ENSBTAG00000024027	TRMT10C	97	79.607	ENSSTOG00000012199	TRMT10C	97	79.607	Ictidomys_tridecemlineatus
ENSBTAG00000024027	TRMT10C	81	52.149	ENSKMAG00000022027	trmt10c	81	52.436	Kryptolebias_marmoratus
ENSBTAG00000024027	TRMT10C	85	47.312	ENSLBEG00000013143	trmt10c	75	47.312	Labrus_bergylta
ENSBTAG00000024027	TRMT10C	84	55.899	ENSLACG00000002036	TRMT10C	93	55.337	Latimeria_chalumnae
ENSBTAG00000024027	TRMT10C	81	54.571	ENSLOCG00000017802	trmt10c	79	54.571	Lepisosteus_oculatus
ENSBTAG00000024027	TRMT10C	97	81.907	ENSLAFG00000009677	TRMT10C	99	81.907	Loxodonta_africana
ENSBTAG00000024027	TRMT10C	97	82.396	ENSMMUG00000017780	TRMT10C	96	82.396	Macaca_mulatta
ENSBTAG00000024027	TRMT10C	50	57.746	ENSMAMG00000003124	trmt10c	63	57.746	Mastacembelus_armatus
ENSBTAG00000024027	TRMT10C	50	58.294	ENSMZEG00005000671	trmt10c	64	58.294	Maylandia_zebra
ENSBTAG00000024027	TRMT10C	59	55.645	ENSMGAG00000014375	TRMT10C	79	62.069	Meleagris_gallopavo
ENSBTAG00000024027	TRMT10C	98	71.981	ENSMAUG00000009904	Trmt10c	99	71.981	Mesocricetus_auratus
ENSBTAG00000024027	TRMT10C	98	71.807	ENSMOCG00000020572	Trmt10c	99	71.807	Microtus_ochrogaster
ENSBTAG00000024027	TRMT10C	60	51.779	ENSMMOG00000018106	trmt10c	61	58.454	Mola_mola
ENSBTAG00000024027	TRMT10C	98	56.490	ENSMODG00000025175	TRMT10C	98	56.490	Monodelphis_domestica
ENSBTAG00000024027	TRMT10C	84	48.000	ENSMALG00000016236	trmt10c	79	46.939	Monopterus_albus
ENSBTAG00000024027	TRMT10C	97	74.572	MGP_CAROLIEiJ_G0020812	Trmt10c	99	74.572	Mus_caroli
ENSBTAG00000024027	TRMT10C	97	74.572	ENSMUSG00000044763	Trmt10c	99	74.572	Mus_musculus
ENSBTAG00000024027	TRMT10C	97	74.817	MGP_PahariEiJ_G0016512	Trmt10c	99	74.817	Mus_pahari
ENSBTAG00000024027	TRMT10C	97	75.061	MGP_SPRETEiJ_G0021712	Trmt10c	99	75.061	Mus_spretus
ENSBTAG00000024027	TRMT10C	98	82.482	ENSMPUG00000019979	TRMT10C	97	82.482	Mustela_putorius_furo
ENSBTAG00000024027	TRMT10C	98	81.752	ENSMLUG00000028638	-	99	81.752	Myotis_lucifugus
ENSBTAG00000024027	TRMT10C	98	81.840	ENSMLUG00000030097	-	99	81.840	Myotis_lucifugus
ENSBTAG00000024027	TRMT10C	98	72.330	ENSNGAG00000022215	Trmt10c	99	72.087	Nannospalax_galili
ENSBTAG00000024027	TRMT10C	53	56.696	ENSNBRG00000017903	trmt10c	85	56.696	Neolamprologus_brichardi
ENSBTAG00000024027	TRMT10C	95	80.750	ENSOPRG00000007388	TRMT10C	99	80.750	Ochotona_princeps
ENSBTAG00000024027	TRMT10C	86	47.340	ENSONIG00000003128	trmt10c	100	47.606	Oreochromis_niloticus
ENSBTAG00000024027	TRMT10C	87	54.743	ENSOANG00000007508	TRMT10C	99	53.930	Ornithorhynchus_anatinus
ENSBTAG00000024027	TRMT10C	100	77.381	ENSOCUG00000011103	TRMT10C	99	77.381	Oryctolagus_cuniculus
ENSBTAG00000024027	TRMT10C	78	52.450	ENSORLG00000004992	trmt10c	69	51.585	Oryzias_latipes
ENSBTAG00000024027	TRMT10C	78	53.026	ENSORLG00020016083	trmt10c	69	52.161	Oryzias_latipes_hni
ENSBTAG00000024027	TRMT10C	78	52.161	ENSORLG00015014590	trmt10c	69	51.297	Oryzias_latipes_hsok
ENSBTAG00000024027	TRMT10C	59	53.815	ENSOMEG00000016820	trmt10c	87	53.815	Oryzias_melastigma
ENSBTAG00000024027	TRMT10C	98	76.942	ENSOGAG00000001819	TRMT10C	99	76.942	Otolemur_garnettii
ENSBTAG00000024027	TRMT10C	100	96.667	ENSOARG00000001677	TRMT10C	99	96.667	Ovis_aries
ENSBTAG00000024027	TRMT10C	98	82.482	ENSPTIG00000002271	TRMT10C	97	82.482	Panthera_tigris_altaica
ENSBTAG00000024027	TRMT10C	95	81.203	ENSPTRG00000015171	TRMT10C	99	81.203	Pan_troglodytes
ENSBTAG00000024027	TRMT10C	95	81.203	ENSPTRG00000051763	-	99	81.203	Pan_troglodytes
ENSBTAG00000024027	TRMT10C	84	51.240	ENSPKIG00000010307	trmt10c	79	49.862	Paramormyrops_kingsleyae
ENSBTAG00000024027	TRMT10C	95	52.854	ENSPSIG00000004052	TRMT10C	98	52.854	Pelodiscus_sinensis
ENSBTAG00000024027	TRMT10C	51	56.019	ENSPMGG00000001599	trmt10c	75	56.019	Periophthalmus_magnuspinnatus
ENSBTAG00000024027	TRMT10C	98	73.366	ENSPEMG00000006986	Trmt10c	99	73.366	Peromyscus_maniculatus_bairdii
ENSBTAG00000024027	TRMT10C	95	59.204	ENSPCIG00000016080	TRMT10C	94	59.204	Phascolarctos_cinereus
ENSBTAG00000024027	TRMT10C	78	52.212	ENSPFOG00000009282	trmt10c	83	52.802	Poecilia_formosa
ENSBTAG00000024027	TRMT10C	61	50.781	ENSPLAG00000010774	trmt10c	78	56.221	Poecilia_latipinna
ENSBTAG00000024027	TRMT10C	54	55.263	ENSPMEG00000023060	trmt10c	76	56.682	Poecilia_mexicana
ENSBTAG00000024027	TRMT10C	78	49.575	ENSPREG00000021808	trmt10c	70	49.575	Poecilia_reticulata
ENSBTAG00000024027	TRMT10C	100	78.571	ENSPPYG00000013592	TRMT10C	99	78.571	Pongo_abelii
ENSBTAG00000024027	TRMT10C	95	79.449	ENSPCAG00000001290	TRMT10C	99	79.449	Procavia_capensis
ENSBTAG00000024027	TRMT10C	95	84.461	ENSPVAG00000009885	TRMT10C	99	84.461	Pteropus_vampyrus
ENSBTAG00000024027	TRMT10C	56	30.041	ENSPVAG00000010317	TRMT10B	76	30.769	Pteropus_vampyrus
ENSBTAG00000024027	TRMT10C	95	45.542	ENSPNYG00000003607	trmt10c	94	45.783	Pundamilia_nyererei
ENSBTAG00000024027	TRMT10C	60	30.769	ENSPNYG00000021439	trmt10b	72	31.982	Pundamilia_nyererei
ENSBTAG00000024027	TRMT10C	51	62.326	ENSPNAG00000010519	trmt10c	69	62.326	Pygocentrus_nattereri
ENSBTAG00000024027	TRMT10C	98	73.723	ENSRNOG00000039567	Trmt10c	99	73.723	Rattus_norvegicus
ENSBTAG00000024027	TRMT10C	92	80.311	ENSSBOG00000023326	TRMT10C	100	80.311	Saimiri_boliviensis_boliviensis
ENSBTAG00000024027	TRMT10C	97	58.072	ENSSHAG00000008854	TRMT10C	96	56.867	Sarcophilus_harrisii
ENSBTAG00000024027	TRMT10C	79	55.233	ENSSFOG00015008704	trmt10c	78	54.203	Scleropages_formosus
ENSBTAG00000024027	TRMT10C	94	46.618	ENSSMAG00000021322	trmt10c	80	45.192	Scophthalmus_maximus
ENSBTAG00000024027	TRMT10C	93	45.763	ENSSDUG00000006430	trmt10c	89	44.292	Seriola_dumerili
ENSBTAG00000024027	TRMT10C	61	54.231	ENSSLDG00000001023	trmt10c	73	57.082	Seriola_lalandi_dorsalis
ENSBTAG00000024027	TRMT10C	95	77.945	ENSSARG00000014342	TRMT10C	99	77.945	Sorex_araneus
ENSBTAG00000024027	TRMT10C	84	51.515	ENSSPUG00000018495	TRMT10C	89	51.226	Sphenodon_punctatus
ENSBTAG00000024027	TRMT10C	57	31.579	ENSSPAG00000004689	trmt10b	59	35.326	Stegastes_partitus
ENSBTAG00000024027	TRMT10C	81	49.855	ENSSPAG00000016082	trmt10c	84	50.000	Stegastes_partitus
ENSBTAG00000024027	TRMT10C	99	88.916	ENSSSCG00000011956	TRMT10C	100	88.916	Sus_scrofa
ENSBTAG00000024027	TRMT10C	79	56.024	ENSTGUG00000013621	TRMT10C	99	56.024	Taeniopygia_guttata
ENSBTAG00000024027	TRMT10C	66	52.632	ENSTRUG00000024252	trmt10c	85	51.930	Takifugu_rubripes
ENSBTAG00000024027	TRMT10C	78	51.952	ENSTNIG00000009440	trmt10c	89	51.952	Tetraodon_nigroviridis
ENSBTAG00000024027	TRMT10C	95	78.500	ENSTBEG00000013894	TRMT10C	99	78.500	Tupaia_belangeri
ENSBTAG00000024027	TRMT10C	95	89.474	ENSTTRG00000015004	TRMT10C	99	89.474	Tursiops_truncatus
ENSBTAG00000024027	TRMT10C	98	83.535	ENSUAMG00000017378	TRMT10C	99	83.535	Ursus_americanus
ENSBTAG00000024027	TRMT10C	98	83.535	ENSUMAG00000003252	TRMT10C	99	83.535	Ursus_maritimus
ENSBTAG00000024027	TRMT10C	98	79.562	ENSVVUG00000021735	TRMT10C	93	79.562	Vulpes_vulpes
ENSBTAG00000024027	TRMT10C	83	50.992	ENSXETG00000029921	trmt10c	86	58.929	Xenopus_tropicalis
ENSBTAG00000024027	TRMT10C	74	49.383	ENSXCOG00000002876	trmt10c	100	50.157	Xiphophorus_couchianus
ENSBTAG00000024027	TRMT10C	61	31.343	ENSXCOG00000009025	trmt10b	63	33.654	Xiphophorus_couchianus
ENSBTAG00000024027	TRMT10C	84	48.168	ENSXMAG00000019205	trmt10c	72	49.337	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	ISS	Function
GO:0000964	mitochondrial RNA 5'-end processing	-	ISS	Process
GO:0005739	mitochondrion	-	ISS	Component
GO:0030488	tRNA methylation	-	IEA	Process
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0052905	tRNA (guanine(9)-N(1))-methyltransferase activity	-	IEA	Function
GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	-	ISS	Function
GO:0070131	positive regulation of mitochondrial translation	-	ISS	Process
GO:0080009	mRNA methylation	-	ISS	Process
GO:0090646	mitochondrial tRNA processing	-	ISS	Process
GO:0097745	mitochondrial tRNA 5'-end processing	-	ISS	Process