EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000024096 (Gene tree)
Gene ID: 618089
Gene Symbol: LSM10
Alias: -
Full Name: Bos taurus LSM10%2C U7 small nuclear RNA associated (LSM10)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 2463 bases
Position: chr3:109482124-109484586
Accession: NM_001083781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000033157	LSM	PF01423.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000033237	-	1016	-	ENSBTAP00000033157	122 (aa)	-	A4IFN1

Gene Model

Click here to download ENSBTAG00000024096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000024096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000024096	LSM10	61	32.432	ENSBTAG00000012376	-	77	30.097
ENSBTAG00000024096	LSM10	61	33.784	ENSBTAG00000055316	-	86	31.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000024096	LSM10	100	90.164	ENSG00000181817	LSM10	99	90.164	Homo_sapiens
ENSBTAG00000024096	LSM10	98	93.333	ENSAMEG00000019854	LSM10	98	93.333	Ailuropoda_melanoleuca
ENSBTAG00000024096	LSM10	96	64.957	ENSACIG00000015420	oscp1a	77	64.957	Amphilophus_citrinellus
ENSBTAG00000024096	LSM10	97	67.797	ENSAOCG00000014654	-	98	67.797	Amphiprion_ocellaris
ENSBTAG00000024096	LSM10	97	67.797	ENSAOCG00000015618	LSM10	98	67.797	Amphiprion_ocellaris
ENSBTAG00000024096	LSM10	96	62.393	ENSAOCG00000015607	LSM10	91	62.393	Amphiprion_ocellaris
ENSBTAG00000024096	LSM10	97	67.797	ENSAPEG00000021845	-	98	67.797	Amphiprion_percula
ENSBTAG00000024096	LSM10	96	62.393	ENSAPEG00000021851	LSM10	91	62.393	Amphiprion_percula
ENSBTAG00000024096	LSM10	95	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSBTAG00000024096	LSM10	96	70.085	ENSACAG00000001231	LSM10	95	70.085	Anolis_carolinensis
ENSBTAG00000024096	LSM10	100	90.164	ENSANAG00000031489	-	100	90.164	Aotus_nancymaae
ENSBTAG00000024096	LSM10	100	91.803	ENSANAG00000018759	-	99	91.803	Aotus_nancymaae
ENSBTAG00000024096	LSM10	97	66.102	ENSACLG00000004728	oscp1a	96	66.102	Astatotilapia_calliptera
ENSBTAG00000024096	LSM10	98	66.387	ENSAMXG00000025301	oscp1a	98	66.387	Astyanax_mexicanus
ENSBTAG00000024096	LSM10	100	90.984	ENSCJAG00000044880	LSM10	99	90.984	Callithrix_jacchus
ENSBTAG00000024096	LSM10	98	95.000	ENSCAFG00000003382	LSM10	98	95.000	Canis_familiaris
ENSBTAG00000024096	LSM10	98	95.000	ENSCAFG00020008920	LSM10	98	95.000	Canis_lupus_dingo
ENSBTAG00000024096	LSM10	100	100.000	ENSCHIG00000009398	LSM10	100	100.000	Capra_hircus
ENSBTAG00000024096	LSM10	98	93.333	ENSCAPG00000012567	LSM10	98	93.333	Cavia_aperea
ENSBTAG00000024096	LSM10	98	93.333	ENSCPOG00000039302	LSM10	98	93.333	Cavia_porcellus
ENSBTAG00000024096	LSM10	100	90.164	ENSCCAG00000008378	-	99	90.164	Cebus_capucinus
ENSBTAG00000024096	LSM10	100	91.803	ENSCCAG00000018913	-	99	91.803	Cebus_capucinus
ENSBTAG00000024096	LSM10	99	90.909	ENSCATG00000006589	LSM10	98	90.909	Cercocebus_atys
ENSBTAG00000024096	LSM10	98	95.000	ENSCLAG00000008633	LSM10	98	95.000	Chinchilla_lanigera
ENSBTAG00000024096	LSM10	99	90.909	ENSCSAG00000000134	LSM10	98	90.909	Chlorocebus_sabaeus
ENSBTAG00000024096	LSM10	98	90.984	ENSCHOG00000008615	LSM10	98	90.984	Choloepus_hoffmanni
ENSBTAG00000024096	LSM10	84	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSBTAG00000024096	LSM10	99	90.909	ENSCANG00000019928	LSM10	98	90.909	Colobus_angolensis_palliatus
ENSBTAG00000024096	LSM10	93	81.034	ENSCGRG00001022673	-	93	81.034	Cricetulus_griseus_chok1gshd
ENSBTAG00000024096	LSM10	98	90.000	ENSCGRG00001004317	-	98	90.000	Cricetulus_griseus_chok1gshd
ENSBTAG00000024096	LSM10	98	90.000	ENSCGRG00000014935	-	98	90.000	Cricetulus_griseus_crigri
ENSBTAG00000024096	LSM10	93	81.034	ENSCGRG00000015514	-	93	81.034	Cricetulus_griseus_crigri
ENSBTAG00000024096	LSM10	98	61.667	ENSCSEG00000010374	oscp1a	81	61.667	Cynoglossus_semilaevis
ENSBTAG00000024096	LSM10	98	63.025	ENSCVAG00000001536	oscp1a	90	63.025	Cyprinodon_variegatus
ENSBTAG00000024096	LSM10	70	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSBTAG00000024096	LSM10	98	70.000	ENSDARG00000101222	oscp1a	99	70.000	Danio_rerio
ENSBTAG00000024096	LSM10	99	92.562	ENSDNOG00000036662	LSM10	98	92.562	Dasypus_novemcinctus
ENSBTAG00000024096	LSM10	98	90.833	ENSDORG00000007579	Lsm10	98	90.833	Dipodomys_ordii
ENSBTAG00000024096	LSM10	98	90.833	ENSETEG00000005703	LSM10	98	90.833	Echinops_telfairi
ENSBTAG00000024096	LSM10	92	52.679	ENSEBUG00000001312	oscp1a	92	52.679	Eptatretus_burgeri
ENSBTAG00000024096	LSM10	98	93.333	ENSEASG00005012194	LSM10	98	93.333	Equus_asinus_asinus
ENSBTAG00000024096	LSM10	98	94.167	ENSECAG00000005071	LSM10	98	94.167	Equus_caballus
ENSBTAG00000024096	LSM10	98	91.667	ENSEEUG00000012032	LSM10	98	91.667	Erinaceus_europaeus
ENSBTAG00000024096	LSM10	100	66.393	ENSELUG00000007452	oscp1a	100	66.393	Esox_lucius
ENSBTAG00000024096	LSM10	96	73.504	ENSFALG00000000851	LSM10	95	73.504	Ficedula_albicollis
ENSBTAG00000024096	LSM10	98	92.500	ENSFDAG00000021056	LSM10	98	92.500	Fukomys_damarensis
ENSBTAG00000024096	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSBTAG00000024096	LSM10	93	63.478	ENSGMOG00000019832	oscp1a	97	63.478	Gadus_morhua
ENSBTAG00000024096	LSM10	97	76.271	ENSGALG00000002127	LSM10	96	76.271	Gallus_gallus
ENSBTAG00000024096	LSM10	99	57.258	ENSGAFG00000016445	oscp1a	98	57.258	Gambusia_affinis
ENSBTAG00000024096	LSM10	98	63.866	ENSGACG00000002329	oscp1a	98	63.866	Gasterosteus_aculeatus
ENSBTAG00000024096	LSM10	98	75.630	ENSGAGG00000024848	LSM10	97	75.630	Gopherus_agassizii
ENSBTAG00000024096	LSM10	100	90.984	ENSGGOG00000003556	LSM10	99	90.984	Gorilla_gorilla
ENSBTAG00000024096	LSM10	97	66.102	ENSHBUG00000001722	oscp1a	96	66.102	Haplochromis_burtoni
ENSBTAG00000024096	LSM10	98	92.500	ENSHGLG00000011625	LSM10	98	92.500	Heterocephalus_glaber_female
ENSBTAG00000024096	LSM10	98	92.500	ENSHGLG00100001769	LSM10	98	92.500	Heterocephalus_glaber_male
ENSBTAG00000024096	LSM10	87	67.925	ENSIPUG00000005808	oscp1a	92	67.925	Ictalurus_punctatus
ENSBTAG00000024096	LSM10	98	95.000	ENSSTOG00000000606	LSM10	98	95.000	Ictidomys_tridecemlineatus
ENSBTAG00000024096	LSM10	97	63.559	ENSKMAG00000012143	oscp1a	98	63.559	Kryptolebias_marmoratus
ENSBTAG00000024096	LSM10	98	61.667	ENSLBEG00000017764	oscp1a	98	61.667	Labrus_bergylta
ENSBTAG00000024096	LSM10	98	72.269	ENSLACG00000015904	LSM10	92	72.269	Latimeria_chalumnae
ENSBTAG00000024096	LSM10	98	68.333	ENSLOCG00000018277	oscp1a	98	68.333	Lepisosteus_oculatus
ENSBTAG00000024096	LSM10	99	92.562	ENSLAFG00000009600	LSM10	98	92.562	Loxodonta_africana
ENSBTAG00000024096	LSM10	99	90.909	ENSMFAG00000009115	LSM10	98	90.909	Macaca_fascicularis
ENSBTAG00000024096	LSM10	99	90.909	ENSMMUG00000017338	LSM10	98	90.909	Macaca_mulatta
ENSBTAG00000024096	LSM10	99	90.909	ENSMNEG00000020023	LSM10	98	90.909	Macaca_nemestrina
ENSBTAG00000024096	LSM10	99	90.909	ENSMLEG00000025150	LSM10	98	90.909	Mandrillus_leucophaeus
ENSBTAG00000024096	LSM10	100	63.115	ENSMAMG00000004427	oscp1a	100	63.115	Mastacembelus_armatus
ENSBTAG00000024096	LSM10	97	66.102	ENSMZEG00005026307	oscp1a	96	66.102	Maylandia_zebra
ENSBTAG00000024096	LSM10	97	76.271	ENSMGAG00000015707	LSM10	96	76.271	Meleagris_gallopavo
ENSBTAG00000024096	LSM10	98	88.333	ENSMAUG00000016624	Lsm10	98	88.333	Mesocricetus_auratus
ENSBTAG00000024096	LSM10	98	89.167	ENSMOCG00000021943	Lsm10	98	89.167	Microtus_ochrogaster
ENSBTAG00000024096	LSM10	94	65.217	ENSMMOG00000013597	oscp1a	86	65.217	Mola_mola
ENSBTAG00000024096	LSM10	99	82.645	ENSMODG00000023328	LSM10	98	82.645	Monodelphis_domestica
ENSBTAG00000024096	LSM10	60	57.692	ENSMALG00000012661	oscp1a	61	57.692	Monopterus_albus
ENSBTAG00000024096	LSM10	98	90.000	MGP_CAROLIEiJ_G0026467	Lsm10	100	91.398	Mus_caroli
ENSBTAG00000024096	LSM10	98	90.833	ENSMUSG00000050188	Lsm10	100	92.473	Mus_musculus
ENSBTAG00000024096	LSM10	98	90.833	MGP_PahariEiJ_G0028798	Lsm10	100	92.473	Mus_pahari
ENSBTAG00000024096	LSM10	98	90.833	MGP_SPRETEiJ_G0027446	Lsm10	100	92.473	Mus_spretus
ENSBTAG00000024096	LSM10	98	95.000	ENSMPUG00000018593	LSM10	98	95.000	Mustela_putorius_furo
ENSBTAG00000024096	LSM10	98	89.167	ENSMLUG00000023895	LSM10	98	89.167	Myotis_lucifugus
ENSBTAG00000024096	LSM10	98	92.500	ENSNGAG00000015011	Lsm10	98	92.500	Nannospalax_galili
ENSBTAG00000024096	LSM10	98	66.387	ENSNBRG00000014306	oscp1a	97	66.387	Neolamprologus_brichardi
ENSBTAG00000024096	LSM10	100	91.803	ENSNLEG00000033754	LSM10	99	91.803	Nomascus_leucogenys
ENSBTAG00000024096	LSM10	99	82.645	ENSMEUG00000006313	LSM10	98	82.645	Notamacropus_eugenii
ENSBTAG00000024096	LSM10	98	90.833	ENSOPRG00000001699	LSM10	98	90.833	Ochotona_princeps
ENSBTAG00000024096	LSM10	98	95.000	ENSODEG00000019161	LSM10	98	95.000	Octodon_degus
ENSBTAG00000024096	LSM10	98	66.667	ENSONIG00000020904	oscp1a	98	66.667	Oreochromis_niloticus
ENSBTAG00000024096	LSM10	100	77.869	ENSOANG00000002066	LSM10	99	77.869	Ornithorhynchus_anatinus
ENSBTAG00000024096	LSM10	98	90.000	ENSOCUG00000005333	LSM10	98	90.000	Oryctolagus_cuniculus
ENSBTAG00000024096	LSM10	98	62.500	ENSORLG00000009504	oscp1a	99	62.500	Oryzias_latipes
ENSBTAG00000024096	LSM10	98	62.500	ENSORLG00020016201	oscp1a	99	62.500	Oryzias_latipes_hni
ENSBTAG00000024096	LSM10	97	64.407	ENSORLG00015007794	oscp1a	97	64.407	Oryzias_latipes_hsok
ENSBTAG00000024096	LSM10	98	92.500	ENSOGAG00000002653	LSM10	98	92.500	Otolemur_garnettii
ENSBTAG00000024096	LSM10	100	100.000	ENSOARG00000009596	LSM10	100	100.000	Ovis_aries
ENSBTAG00000024096	LSM10	100	90.164	ENSPPAG00000023465	LSM10	99	90.164	Pan_paniscus
ENSBTAG00000024096	LSM10	98	93.333	ENSPPRG00000014619	LSM10	98	93.333	Panthera_pardus
ENSBTAG00000024096	LSM10	98	93.333	ENSPTIG00000004613	LSM10	98	93.333	Panthera_tigris_altaica
ENSBTAG00000024096	LSM10	100	90.164	ENSPTRG00000000539	LSM10	99	90.164	Pan_troglodytes
ENSBTAG00000024096	LSM10	99	90.909	ENSPANG00000023172	LSM10	98	90.909	Papio_anubis
ENSBTAG00000024096	LSM10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSBTAG00000024096	LSM10	98	73.950	ENSPSIG00000000590	LSM10	97	73.950	Pelodiscus_sinensis
ENSBTAG00000024096	LSM10	63	64.935	ENSPMGG00000015718	oscp1a	100	64.935	Periophthalmus_magnuspinnatus
ENSBTAG00000024096	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSBTAG00000024096	LSM10	95	63.793	ENSPFOG00000020490	oscp1a	98	63.793	Poecilia_formosa
ENSBTAG00000024096	LSM10	95	63.793	ENSPLAG00000016537	oscp1a	89	63.793	Poecilia_latipinna
ENSBTAG00000024096	LSM10	93	65.487	ENSPMEG00000000174	oscp1a	97	65.487	Poecilia_mexicana
ENSBTAG00000024096	LSM10	99	61.983	ENSPREG00000009899	oscp1a	92	61.983	Poecilia_reticulata
ENSBTAG00000024096	LSM10	100	90.984	ENSPPYG00000001539	LSM10	99	90.984	Pongo_abelii
ENSBTAG00000024096	LSM10	100	90.984	ENSPCAG00000002520	LSM10	99	90.984	Procavia_capensis
ENSBTAG00000024096	LSM10	98	92.500	ENSPVAG00000008644	LSM10	98	92.500	Pteropus_vampyrus
ENSBTAG00000024096	LSM10	97	66.102	ENSPNYG00000003138	oscp1a	96	66.102	Pundamilia_nyererei
ENSBTAG00000024096	LSM10	97	65.254	ENSPNAG00000028829	oscp1a	98	65.254	Pygocentrus_nattereri
ENSBTAG00000024096	LSM10	98	91.667	ENSRNOG00000025716	Lsm10	98	91.667	Rattus_norvegicus
ENSBTAG00000024096	LSM10	99	90.909	ENSRBIG00000001561	LSM10	98	90.909	Rhinopithecus_bieti
ENSBTAG00000024096	LSM10	99	90.909	ENSRROG00000011414	LSM10	98	90.909	Rhinopithecus_roxellana
ENSBTAG00000024096	LSM10	100	91.803	ENSSBOG00000036413	-	99	91.803	Saimiri_boliviensis_boliviensis
ENSBTAG00000024096	LSM10	99	82.645	ENSSHAG00000018056	LSM10	98	82.645	Sarcophilus_harrisii
ENSBTAG00000024096	LSM10	100	66.393	ENSSFOG00015019954	lsm10	100	66.393	Scleropages_formosus
ENSBTAG00000024096	LSM10	94	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSBTAG00000024096	LSM10	100	63.415	ENSSDUG00000007090	oscp1a	100	63.415	Seriola_dumerili
ENSBTAG00000024096	LSM10	97	64.407	ENSSLDG00000000800	oscp1a	98	64.407	Seriola_lalandi_dorsalis
ENSBTAG00000024096	LSM10	98	88.525	ENSSARG00000004211	LSM10	98	90.164	Sorex_araneus
ENSBTAG00000024096	LSM10	95	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSBTAG00000024096	LSM10	100	91.803	ENSSSCG00000038916	LSM10	99	91.803	Sus_scrofa
ENSBTAG00000024096	LSM10	97	73.729	ENSTGUG00000001602	-	97	73.729	Taeniopygia_guttata
ENSBTAG00000024096	LSM10	97	73.729	ENSTGUG00000001600	-	97	73.729	Taeniopygia_guttata
ENSBTAG00000024096	LSM10	99	64.463	ENSTRUG00000010531	oscp1a	98	64.463	Takifugu_rubripes
ENSBTAG00000024096	LSM10	100	90.164	ENSTBEG00000016674	LSM10	99	90.164	Tupaia_belangeri
ENSBTAG00000024096	LSM10	98	92.500	ENSUAMG00000020265	LSM10	98	92.500	Ursus_americanus
ENSBTAG00000024096	LSM10	99	91.736	ENSUMAG00000001438	LSM10	56	91.736	Ursus_maritimus
ENSBTAG00000024096	LSM10	98	95.000	ENSVVUG00000023209	LSM10	98	95.000	Vulpes_vulpes
ENSBTAG00000024096	LSM10	99	71.074	ENSXETG00000027631	lsm10	98	71.074	Xenopus_tropicalis
ENSBTAG00000024096	LSM10	99	60.331	ENSXCOG00000018776	oscp1a	76	60.331	Xiphophorus_couchianus
ENSBTAG00000024096	LSM10	93	63.717	ENSXMAG00000019963	oscp1a	90	63.717	Xiphophorus_maculatus