EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000025400 (Gene tree)
Gene ID: 615359
Gene Symbol: PARP4
Alias: ADPRTL1|VAULT3|VPARP|VWA5C|p193
Full Name: poly(ADP-ribose) polymerase family member 4
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 76060 bases
Position: chr12:36398675-36474734
Accession: 615359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000074536	PARP	PF00644.20	3.5e-36	1	1
ENSBTAP00000071685	PARP	PF00644.20	3.5e-36	1	1
ENSBTAP00000035522	PARP	PF00644.20	3.7e-36	1	1
ENSBTAP00000072437	PARP	PF00644.20	3.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000035651	PARP4-201	5777	XM_002691868	ENSBTAP00000035522	1831 (aa)	XP_002691914	E1BD73
ENSBTAT00000082218	PARP4-203	5606	-	ENSBTAP00000074536	1774 (aa)	-	-
ENSBTAT00000079539	PARP4-202	5645	-	ENSBTAP00000071685	1787 (aa)	-	-
ENSBTAT00000082903	PARP4-204	6016	-	ENSBTAP00000072437	1831 (aa)	-	UPI000D535039

Gene Model

Click here to download ENSBTAG00000025400's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03410	Base excision repair	KEGG
bta04210	Apoptosis	KEGG
bta04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000025400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000025400	PARP4	92	73.319	ENSG00000102699	PARP4	94	71.159	Homo_sapiens
ENSBTAG00000025400	PARP4	67	45.159	ENSAPOG00000020678	parp4	94	45.455	Acanthochromis_polyacanthus
ENSBTAG00000025400	PARP4	82	77.077	ENSAMEG00000017377	PARP4	100	79.753	Ailuropoda_melanoleuca
ENSBTAG00000025400	PARP4	73	45.455	ENSACIG00000021890	parp4	99	45.365	Amphilophus_citrinellus
ENSBTAG00000025400	PARP4	74	45.840	ENSAPEG00000014531	parp4	64	45.680	Amphiprion_percula
ENSBTAG00000025400	PARP4	66	47.173	ENSATEG00000023758	parp4	81	47.168	Anabas_testudineus
ENSBTAG00000025400	PARP4	66	58.689	ENSAPLG00000005053	PARP4	99	62.082	Anas_platyrhynchos
ENSBTAG00000025400	PARP4	73	56.061	ENSACAG00000001725	PARP4	75	56.061	Anolis_carolinensis
ENSBTAG00000025400	PARP4	100	64.216	ENSANAG00000021254	PARP4	86	77.715	Aotus_nancymaae
ENSBTAG00000025400	PARP4	74	45.164	ENSACLG00000009783	parp4	72	45.164	Astatotilapia_calliptera
ENSBTAG00000025400	PARP4	74	47.261	ENSAMXG00000016657	parp4	77	47.261	Astyanax_mexicanus
ENSBTAG00000025400	PARP4	100	64.204	ENSCJAG00000004452	PARP4	92	71.439	Callithrix_jacchus
ENSBTAG00000025400	PARP4	91	71.044	ENSCAFG00000007375	PARP4	97	76.235	Canis_familiaris
ENSBTAG00000025400	PARP4	91	70.658	ENSCAFG00020002104	PARP4	99	82.114	Canis_lupus_dingo
ENSBTAG00000025400	PARP4	100	88.871	ENSCHIG00000016066	PARP4	100	85.870	Capra_hircus
ENSBTAG00000025400	PARP4	86	77.206	ENSTSYG00000014701	PARP4	85	77.206	Carlito_syrichta
ENSBTAG00000025400	PARP4	82	71.923	ENSCPOG00000014672	PARP4	91	70.096	Cavia_porcellus
ENSBTAG00000025400	PARP4	100	64.204	ENSCCAG00000032863	PARP4	79	72.218	Cebus_capucinus
ENSBTAG00000025400	PARP4	100	61.180	ENSCATG00000035770	PARP4	93	68.668	Cercocebus_atys
ENSBTAG00000025400	PARP4	100	64.200	ENSCSAG00000018004	PARP4	95	71.674	Chlorocebus_sabaeus
ENSBTAG00000025400	PARP4	52	77.500	ENSCHOG00000006882	-	75	77.500	Choloepus_hoffmanni
ENSBTAG00000025400	PARP4	74	61.576	ENSCPBG00000020893	PARP4	79	61.013	Chrysemys_picta_bellii
ENSBTAG00000025400	PARP4	86	71.332	ENSCANG00000014573	PARP4	90	71.515	Colobus_angolensis_palliatus
ENSBTAG00000025400	PARP4	77	75.405	ENSCGRG00001021886	Parp4	81	75.405	Cricetulus_griseus_chok1gshd
ENSBTAG00000025400	PARP4	77	75.405	ENSCGRG00000011944	Parp4	80	75.405	Cricetulus_griseus_crigri
ENSBTAG00000025400	PARP4	73	43.796	ENSCSEG00000004631	parp4	82	44.030	Cynoglossus_semilaevis
ENSBTAG00000025400	PARP4	68	47.772	ENSCVAG00000010227	parp4	99	48.083	Cyprinodon_variegatus
ENSBTAG00000025400	PARP4	74	46.688	ENSDARG00000069934	parp4	76	46.927	Danio_rerio
ENSBTAG00000025400	PARP4	82	73.625	ENSDNOG00000037733	PARP4	84	69.832	Dasypus_novemcinctus
ENSBTAG00000025400	PARP4	75	73.115	ENSDORG00000029090	Parp4	98	73.115	Dipodomys_ordii
ENSBTAG00000025400	PARP4	87	81.944	ENSEASG00005000229	PARP4	97	77.370	Equus_asinus_asinus
ENSBTAG00000025400	PARP4	94	72.592	ENSECAG00000009458	PARP4	97	73.426	Equus_caballus
ENSBTAG00000025400	PARP4	73	46.865	ENSELUG00000005711	parp4	76	47.106	Esox_lucius
ENSBTAG00000025400	PARP4	90	72.306	ENSFCAG00000031561	PARP4	96	73.301	Felis_catus
ENSBTAG00000025400	PARP4	89	68.929	ENSFDAG00000010439	PARP4	93	68.908	Fukomys_damarensis
ENSBTAG00000025400	PARP4	67	46.328	ENSFHEG00000021894	parp4	95	46.478	Fundulus_heteroclitus
ENSBTAG00000025400	PARP4	62	53.933	ENSGMOG00000001674	parp4	72	53.933	Gadus_morhua
ENSBTAG00000025400	PARP4	73	58.666	ENSGALG00000034473	PARP4	84	58.666	Gallus_gallus
ENSBTAG00000025400	PARP4	74	45.085	ENSGACG00000008521	parp4	80	45.085	Gasterosteus_aculeatus
ENSBTAG00000025400	PARP4	71	61.581	ENSGAGG00000006063	PARP4	77	61.581	Gopherus_agassizii
ENSBTAG00000025400	PARP4	90	71.491	ENSGGOG00000002940	PARP4	92	69.763	Gorilla_gorilla
ENSBTAG00000025400	PARP4	57	51.405	ENSHBUG00000018539	parp4	99	50.754	Haplochromis_burtoni
ENSBTAG00000025400	PARP4	86	69.964	ENSHGLG00000008309	PARP4	91	69.798	Heterocephalus_glaber_female
ENSBTAG00000025400	PARP4	86	69.964	ENSHGLG00100012331	PARP4	91	69.798	Heterocephalus_glaber_male
ENSBTAG00000025400	PARP4	74	44.372	ENSHCOG00000017842	parp4	77	44.310	Hippocampus_comes
ENSBTAG00000025400	PARP4	76	46.822	ENSIPUG00000003181	parp4	78	46.822	Ictalurus_punctatus
ENSBTAG00000025400	PARP4	81	70.151	ENSSTOG00000027869	PARP4	90	73.411	Ictidomys_tridecemlineatus
ENSBTAG00000025400	PARP4	56	50.291	ENSKMAG00000018334	parp4	97	50.291	Kryptolebias_marmoratus
ENSBTAG00000025400	PARP4	75	46.454	ENSLBEG00000013362	parp4	71	46.497	Labrus_bergylta
ENSBTAG00000025400	PARP4	77	49.919	ENSLACG00000005075	-	81	50.121	Latimeria_chalumnae
ENSBTAG00000025400	PARP4	74	50.041	ENSLOCG00000010789	parp4	88	46.753	Lepisosteus_oculatus
ENSBTAG00000025400	PARP4	67	76.735	ENSLAFG00000002022	-	100	77.512	Loxodonta_africana
ENSBTAG00000025400	PARP4	100	64.658	ENSMMUG00000012297	PARP4	95	72.031	Macaca_mulatta
ENSBTAG00000025400	PARP4	91	62.627	ENSMNEG00000044999	PARP4	95	70.364	Macaca_nemestrina
ENSBTAG00000025400	PARP4	100	64.530	ENSMLEG00000041053	PARP4	93	72.914	Mandrillus_leucophaeus
ENSBTAG00000025400	PARP4	68	43.506	ENSMAMG00000020871	parp4	94	43.755	Mastacembelus_armatus
ENSBTAG00000025400	PARP4	72	45.164	ENSMZEG00005014412	parp4	75	45.164	Maylandia_zebra
ENSBTAG00000025400	PARP4	78	57.143	ENSMGAG00000015136	PARP4	84	58.219	Meleagris_gallopavo
ENSBTAG00000025400	PARP4	77	70.638	ENSMICG00000028028	PARP4	92	70.708	Microcebus_murinus
ENSBTAG00000025400	PARP4	90	70.646	ENSMOCG00000016582	Parp4	79	74.241	Microtus_ochrogaster
ENSBTAG00000025400	PARP4	62	45.612	ENSMMOG00000019397	parp4	98	41.410	Mola_mola
ENSBTAG00000025400	PARP4	76	70.769	ENSMODG00000007894	PARP4	75	66.259	Monodelphis_domestica
ENSBTAG00000025400	PARP4	59	46.399	ENSMALG00000004027	parp4	98	46.536	Monopterus_albus
ENSBTAG00000025400	PARP4	81	68.551	MGP_CAROLIEiJ_G0019339	-	73	68.551	Mus_caroli
ENSBTAG00000025400	PARP4	79	73.856	ENSMUSG00000054509	Parp4	72	73.856	Mus_musculus
ENSBTAG00000025400	PARP4	84	70.760	MGP_PahariEiJ_G0030357	Parp4	76	72.345	Mus_pahari
ENSBTAG00000025400	PARP4	80	71.184	MGP_SPRETEiJ_G0020230	Parp4	75	72.054	Mus_spretus
ENSBTAG00000025400	PARP4	75	78.553	ENSMPUG00000013318	PARP4	94	72.357	Mustela_putorius_furo
ENSBTAG00000025400	PARP4	98	70.358	ENSMLUG00000003797	PARP4	97	73.836	Myotis_lucifugus
ENSBTAG00000025400	PARP4	87	71.418	ENSNGAG00000018396	Parp4	89	70.125	Nannospalax_galili
ENSBTAG00000025400	PARP4	54	84.746	ENSMEUG00000015644	-	87	84.746	Notamacropus_eugenii
ENSBTAG00000025400	PARP4	73	47.174	ENSONIG00000010261	parp4	77	47.174	Oreochromis_niloticus
ENSBTAG00000025400	PARP4	87	71.580	ENSOCUG00000014529	PARP4	92	67.103	Oryctolagus_cuniculus
ENSBTAG00000025400	PARP4	55	49.107	ENSORLG00000018162	parp4	89	49.647	Oryzias_latipes
ENSBTAG00000025400	PARP4	55	50.547	ENSORLG00020011392	parp4	88	51.955	Oryzias_latipes_hni
ENSBTAG00000025400	PARP4	66	47.193	ENSORLG00015007534	parp4	95	47.193	Oryzias_latipes_hsok
ENSBTAG00000025400	PARP4	69	52.223	ENSOMEG00000012305	parp4	87	51.679	Oryzias_melastigma
ENSBTAG00000025400	PARP4	78	76.295	ENSOGAG00000016230	PARP4	83	77.895	Otolemur_garnettii
ENSBTAG00000025400	PARP4	100	90.850	ENSOARG00000014415	PARP4	100	90.850	Ovis_aries
ENSBTAG00000025400	PARP4	100	64.041	ENSPPAG00000024134	PARP4	94	71.089	Pan_paniscus
ENSBTAG00000025400	PARP4	89	72.834	ENSPPRG00000009047	PARP4	96	73.080	Panthera_pardus
ENSBTAG00000025400	PARP4	100	64.290	ENSPTRG00000005711	PARP4	94	71.259	Pan_troglodytes
ENSBTAG00000025400	PARP4	100	64.235	ENSPANG00000006504	PARP4	93	72.401	Papio_anubis
ENSBTAG00000025400	PARP4	69	60.744	ENSPSIG00000014196	PARP4	77	61.603	Pelodiscus_sinensis
ENSBTAG00000025400	PARP4	55	59.459	ENSPMGG00000007212	parp4	84	59.459	Periophthalmus_magnuspinnatus
ENSBTAG00000025400	PARP4	75	73.512	ENSPEMG00000012639	Parp4	76	70.131	Peromyscus_maniculatus_bairdii
ENSBTAG00000025400	PARP4	51	52.893	ENSPMAG00000008938	-	93	52.893	Petromyzon_marinus
ENSBTAG00000025400	PARP4	69	74.803	ENSPCIG00000017800	-	91	83.908	Phascolarctos_cinereus
ENSBTAG00000025400	PARP4	73	46.569	ENSPFOG00000002081	parp4	99	46.324	Poecilia_formosa
ENSBTAG00000025400	PARP4	53	51.232	ENSPLAG00000021665	parp4	88	49.367	Poecilia_latipinna
ENSBTAG00000025400	PARP4	57	49.223	ENSPLAG00000019059	parp4	91	49.223	Poecilia_latipinna
ENSBTAG00000025400	PARP4	53	49.695	ENSPMEG00000017006	parp4	88	48.594	Poecilia_mexicana
ENSBTAG00000025400	PARP4	57	49.119	ENSPMEG00000016931	-	91	49.119	Poecilia_mexicana
ENSBTAG00000025400	PARP4	81	73.693	ENSPCOG00000022852	PARP4	98	73.753	Propithecus_coquereli
ENSBTAG00000025400	PARP4	81	71.098	ENSPVAG00000016461	PARP4	89	71.098	Pteropus_vampyrus
ENSBTAG00000025400	PARP4	71	45.513	ENSPNYG00000015691	parp4	70	45.100	Pundamilia_nyererei
ENSBTAG00000025400	PARP4	53	51.802	ENSPNAG00000019054	parp4	64	51.802	Pygocentrus_nattereri
ENSBTAG00000025400	PARP4	90	76.723	ENSRBIG00000040334	PARP4	93	70.761	Rhinopithecus_bieti
ENSBTAG00000025400	PARP4	90	75.182	ENSRROG00000040417	PARP4	93	69.468	Rhinopithecus_roxellana
ENSBTAG00000025400	PARP4	63	48.940	ENSSDUG00000014635	parp4	91	48.940	Seriola_dumerili
ENSBTAG00000025400	PARP4	66	45.933	ENSSLDG00000022915	parp4	72	46.000	Seriola_lalandi_dorsalis
ENSBTAG00000025400	PARP4	67	47.439	ENSSPAG00000010424	parp4	96	46.648	Stegastes_partitus
ENSBTAG00000025400	PARP4	89	72.090	ENSSSCG00000022957	PARP4	72	71.449	Sus_scrofa
ENSBTAG00000025400	PARP4	74	46.010	ENSTNIG00000015654	parp4	100	45.997	Tetraodon_nigroviridis
ENSBTAG00000025400	PARP4	59	77.404	ENSUAMG00000027134	-	96	74.830	Ursus_americanus
ENSBTAG00000025400	PARP4	82	77.512	ENSUMAG00000013978	PARP4	88	77.512	Ursus_maritimus
ENSBTAG00000025400	PARP4	81	81.818	ENSVVUG00000006363	PARP4	91	81.818	Vulpes_vulpes
ENSBTAG00000025400	PARP4	67	50.604	ENSXETG00000002639	-	97	50.604	Xenopus_tropicalis