EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000025452 (Gene tree)
Gene ID: 789082
Gene Symbol: SF3A2
Alias: -
Full Name: Bos taurus splicing factor 3a subunit 2 (SF3A2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 9472 bases
Position: chr7:21392211-21401682
Accession: NM_001099211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000035656	zf-met	PF12874.7	1.2e-06	1	1
ENSBTAP00000062091	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067195	-	2473	-	ENSBTAP00000062091	477 (aa)	-	A5PJN8
ENSBTAT00000035788	-	1624	XM_024994713	ENSBTAP00000035656	477 (aa)	XP_024850481	A5PJN8

Gene Model

Click here to download ENSBTAG00000025452's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000025452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000025452	SF3A2	50	99.582	ENSG00000104897	SF3A2	100	99.259	Homo_sapiens
ENSBTAG00000025452	SF3A2	51	90.164	ENSAPOG00000003916	sf3a2	73	95.370	Acanthochromis_polyacanthus
ENSBTAG00000025452	SF3A2	100	86.207	ENSAMEG00000005469	SF3A2	52	100.000	Ailuropoda_melanoleuca
ENSBTAG00000025452	SF3A2	50	90.833	ENSACIG00000018153	sf3a2	73	95.370	Amphilophus_citrinellus
ENSBTAG00000025452	SF3A2	51	90.164	ENSAOCG00000015960	sf3a2	73	95.370	Amphiprion_ocellaris
ENSBTAG00000025452	SF3A2	51	90.164	ENSAPEG00000012336	sf3a2	73	95.370	Amphiprion_percula
ENSBTAG00000025452	SF3A2	51	90.984	ENSATEG00000015449	sf3a2	76	93.333	Anabas_testudineus
ENSBTAG00000025452	SF3A2	55	88.123	ENSACLG00000002356	sf3a2	77	93.778	Astatotilapia_calliptera
ENSBTAG00000025452	SF3A2	51	91.429	ENSAMXG00000032428	sf3a2	72	95.833	Astyanax_mexicanus
ENSBTAG00000025452	SF3A2	100	93.724	ENSCJAG00000013206	-	100	93.711	Callithrix_jacchus
ENSBTAG00000025452	SF3A2	100	95.258	ENSCAFG00000019414	SF3A2	50	100.000	Canis_familiaris
ENSBTAG00000025452	SF3A2	100	95.258	ENSCAFG00020018153	SF3A2	50	100.000	Canis_lupus_dingo
ENSBTAG00000025452	SF3A2	100	100.000	ENSCHIG00000018323	SF3A2	100	100.000	Capra_hircus
ENSBTAG00000025452	SF3A2	50	100.000	ENSCPOG00000032868	SF3A2	53	100.000	Cavia_porcellus
ENSBTAG00000025452	SF3A2	50	99.582	ENSCCAG00000009812	SF3A2	87	98.919	Cebus_capucinus
ENSBTAG00000025452	SF3A2	50	99.582	ENSCATG00000038453	SF3A2	52	99.582	Cercocebus_atys
ENSBTAG00000025452	SF3A2	100	91.841	ENSCLAG00000008987	SF3A2	100	92.872	Chinchilla_lanigera
ENSBTAG00000025452	SF3A2	50	99.582	ENSCSAG00000011717	SF3A2	51	99.582	Chlorocebus_sabaeus
ENSBTAG00000025452	SF3A2	51	95.510	ENSCPBG00000018569	SF3A2	72	97.788	Chrysemys_picta_bellii
ENSBTAG00000025452	SF3A2	50	99.582	ENSCANG00000024451	SF3A2	52	99.582	Colobus_angolensis_palliatus
ENSBTAG00000025452	SF3A2	50	100.000	ENSCGRG00000011089	Sf3a2	94	100.000	Cricetulus_griseus_crigri
ENSBTAG00000025452	SF3A2	55	85.985	ENSCSEG00000014308	sf3a2	79	93.304	Cynoglossus_semilaevis
ENSBTAG00000025452	SF3A2	50	90.000	ENSCVAG00000021349	sf3a2	73	95.833	Cyprinodon_variegatus
ENSBTAG00000025452	SF3A2	51	90.204	ENSDARG00000021107	sf3a2	81	93.750	Danio_rerio
ENSBTAG00000025452	SF3A2	100	89.669	ENSDORG00000014445	Sf3a2	52	99.582	Dipodomys_ordii
ENSBTAG00000025452	SF3A2	62	68.136	FBgn0036314	Sf3a2	86	82.379	Drosophila_melanogaster
ENSBTAG00000025452	SF3A2	70	100.000	ENSETEG00000016949	-	61	100.000	Echinops_telfairi
ENSBTAG00000025452	SF3A2	100	95.388	ENSEASG00005021972	SF3A2	100	95.388	Equus_asinus_asinus
ENSBTAG00000025452	SF3A2	51	92.531	ENSELUG00000008471	sf3a2	74	94.222	Esox_lucius
ENSBTAG00000025452	SF3A2	100	90.488	ENSFCAG00000030476	SF3A2	55	99.582	Felis_catus
ENSBTAG00000025452	SF3A2	50	90.417	ENSFHEG00000002392	sf3a2	74	95.370	Fundulus_heteroclitus
ENSBTAG00000025452	SF3A2	51	90.041	ENSGMOG00000012186	sf3a2	72	95.370	Gadus_morhua
ENSBTAG00000025452	SF3A2	51	93.061	ENSGALG00000021679	SF3A2	72	97.345	Gallus_gallus
ENSBTAG00000025452	SF3A2	51	91.020	ENSGACG00000015255	sf3a2	74	96.296	Gasterosteus_aculeatus
ENSBTAG00000025452	SF3A2	50	99.582	ENSGGOG00000006613	SF3A2	52	99.582	Gorilla_gorilla
ENSBTAG00000025452	SF3A2	55	88.123	ENSHBUG00000021796	sf3a2	77	93.778	Haplochromis_burtoni
ENSBTAG00000025452	SF3A2	100	87.413	ENSHGLG00000015102	SF3A2	88	100.000	Heterocephalus_glaber_female
ENSBTAG00000025452	SF3A2	94	100.000	ENSHGLG00100000418	SF3A2	88	100.000	Heterocephalus_glaber_male
ENSBTAG00000025452	SF3A2	55	88.213	ENSHCOG00000001223	sf3a2	77	93.750	Hippocampus_comes
ENSBTAG00000025452	SF3A2	51	89.754	ENSIPUG00000019071	sf3a2	72	95.370	Ictalurus_punctatus
ENSBTAG00000025452	SF3A2	50	100.000	ENSSTOG00000007495	SF3A2	90	91.257	Ictidomys_tridecemlineatus
ENSBTAG00000025452	SF3A2	50	99.582	ENSJJAG00000010635	Sf3a2	96	98.919	Jaculus_jaculus
ENSBTAG00000025452	SF3A2	51	87.755	ENSKMAG00000006295	sf3a2	73	95.370	Kryptolebias_marmoratus
ENSBTAG00000025452	SF3A2	51	91.393	ENSLBEG00000000677	sf3a2	77	92.982	Labrus_bergylta
ENSBTAG00000025452	SF3A2	51	92.245	ENSLACG00000008744	SF3A2	72	95.575	Latimeria_chalumnae
ENSBTAG00000025452	SF3A2	50	99.582	ENSMFAG00000002638	SF3A2	52	99.582	Macaca_fascicularis
ENSBTAG00000025452	SF3A2	50	99.582	ENSMMUG00000010111	SF3A2	52	99.582	Macaca_mulatta
ENSBTAG00000025452	SF3A2	50	99.582	ENSMNEG00000036916	SF3A2	51	99.582	Macaca_nemestrina
ENSBTAG00000025452	SF3A2	51	90.164	ENSMAMG00000009881	sf3a2	76	93.304	Mastacembelus_armatus
ENSBTAG00000025452	SF3A2	55	88.123	ENSMZEG00005025609	sf3a2	77	93.778	Maylandia_zebra
ENSBTAG00000025452	SF3A2	51	93.061	ENSMGAG00000001950	SF3A2	72	97.345	Meleagris_gallopavo
ENSBTAG00000025452	SF3A2	50	99.582	ENSMICG00000015443	SF3A2	52	99.582	Microcebus_murinus
ENSBTAG00000025452	SF3A2	91	100.000	ENSMOCG00000007216	Sf3a2	52	100.000	Microtus_ochrogaster
ENSBTAG00000025452	SF3A2	55	80.153	ENSMMOG00000010657	sf3a2	85	81.250	Mola_mola
ENSBTAG00000025452	SF3A2	51	90.574	ENSMALG00000020442	sf3a2	77	91.667	Monopterus_albus
ENSBTAG00000025452	SF3A2	50	100.000	MGP_CAROLIEiJ_G0015602	-	94	100.000	Mus_caroli
ENSBTAG00000025452	SF3A2	50	100.000	ENSMUSG00000020211	Sf3a2	94	100.000	Mus_musculus
ENSBTAG00000025452	SF3A2	50	100.000	MGP_PahariEiJ_G0031015	-	94	100.000	Mus_pahari
ENSBTAG00000025452	SF3A2	50	100.000	MGP_SPRETEiJ_G0016420	-	94	100.000	Mus_spretus
ENSBTAG00000025452	SF3A2	100	87.780	ENSMPUG00000006956	SF3A2	52	99.163	Mustela_putorius_furo
ENSBTAG00000025452	SF3A2	100	88.808	ENSMLUG00000004426	-	54	99.582	Myotis_lucifugus
ENSBTAG00000025452	SF3A2	50	91.667	ENSNBRG00000019872	sf3a2	77	93.778	Neolamprologus_brichardi
ENSBTAG00000025452	SF3A2	50	91.250	ENSONIG00000010198	sf3a2	77	93.333	Oreochromis_niloticus
ENSBTAG00000025452	SF3A2	56	85.338	ENSORLG00000015301	sf3a2	74	94.444	Oryzias_latipes
ENSBTAG00000025452	SF3A2	56	85.338	ENSORLG00020017235	sf3a2	74	94.444	Oryzias_latipes_hni
ENSBTAG00000025452	SF3A2	50	89.583	ENSORLG00015017116	sf3a2	74	94.444	Oryzias_latipes_hsok
ENSBTAG00000025452	SF3A2	50	90.000	ENSOMEG00000020860	sf3a2	74	94.907	Oryzias_melastigma
ENSBTAG00000025452	SF3A2	100	90.103	ENSOGAG00000033389	SF3A2	52	99.582	Otolemur_garnettii
ENSBTAG00000025452	SF3A2	97	92.105	ENSOARG00000014357	SF3A2	100	84.486	Ovis_aries
ENSBTAG00000025452	SF3A2	100	77.594	ENSPPAG00000037864	-	50	84.937	Pan_paniscus
ENSBTAG00000025452	SF3A2	100	86.373	ENSPPRG00000007798	SF3A2	51	99.582	Panthera_pardus
ENSBTAG00000025452	SF3A2	100	70.455	ENSPTRG00000010227	SF3A2	100	67.284	Pan_troglodytes
ENSBTAG00000025452	SF3A2	50	99.582	ENSPANG00000007949	SF3A2	52	99.582	Papio_anubis
ENSBTAG00000025452	SF3A2	51	92.623	ENSPKIG00000009487	sf3a2	71	94.222	Paramormyrops_kingsleyae
ENSBTAG00000025452	SF3A2	51	94.332	ENSPSIG00000010839	SF3A2	72	96.491	Pelodiscus_sinensis
ENSBTAG00000025452	SF3A2	50	100.000	ENSPEMG00000021288	Sf3a2	52	100.000	Peromyscus_maniculatus_bairdii
ENSBTAG00000025452	SF3A2	50	99.582	ENSPPYG00000009342	SF3A2	52	99.582	Pongo_abelii
ENSBTAG00000025452	SF3A2	50	99.582	ENSPCOG00000020295	SF3A2	53	99.582	Propithecus_coquereli
ENSBTAG00000025452	SF3A2	55	88.123	ENSPNYG00000006928	sf3a2	77	93.778	Pundamilia_nyererei
ENSBTAG00000025452	SF3A2	51	90.574	ENSPNAG00000027582	sf3a2	72	95.833	Pygocentrus_nattereri
ENSBTAG00000025452	SF3A2	86	99.582	ENSRNOG00000019349	Sf3a2	51	99.582	Rattus_norvegicus
ENSBTAG00000025452	SF3A2	99	83.099	ENSRBIG00000026709	SF3A2	53	99.582	Rhinopithecus_bieti
ENSBTAG00000025452	SF3A2	100	94.572	ENSRROG00000034440	SF3A2	100	94.572	Rhinopithecus_roxellana
ENSBTAG00000025452	SF3A2	100	80.652	ENSSBOG00000026071	SF3A2	100	84.760	Saimiri_boliviensis_boliviensis
ENSBTAG00000025452	SF3A2	52	98.785	ENSSHAG00000011677	-	100	98.785	Sarcophilus_harrisii
ENSBTAG00000025452	SF3A2	54	89.189	ENSSFOG00015010920	sf3a2	64	92.920	Scleropages_formosus
ENSBTAG00000025452	SF3A2	50	91.667	ENSSMAG00000002629	sf3a2	75	95.833	Scophthalmus_maximus
ENSBTAG00000025452	SF3A2	53	89.641	ENSSDUG00000015810	sf3a2	77	93.333	Seriola_dumerili
ENSBTAG00000025452	SF3A2	53	89.641	ENSSLDG00000010874	sf3a2	78	92.544	Seriola_lalandi_dorsalis
ENSBTAG00000025452	SF3A2	51	90.574	ENSSPAG00000004960	sf3a2	77	92.105	Stegastes_partitus
ENSBTAG00000025452	SF3A2	100	95.607	ENSSSCG00000039757	SF3A2	52	99.163	Sus_scrofa
ENSBTAG00000025452	SF3A2	50	90.717	ENSTRUG00000009045	sf3a2	75	95.370	Takifugu_rubripes
ENSBTAG00000025452	SF3A2	51	89.669	ENSTNIG00000015318	sf3a2	75	94.907	Tetraodon_nigroviridis
ENSBTAG00000025452	SF3A2	50	84.519	ENSTTRG00000010177	-	52	84.519	Tursiops_truncatus
ENSBTAG00000025452	SF3A2	100	95.258	ENSVVUG00000002578	SF3A2	50	100.000	Vulpes_vulpes
ENSBTAG00000025452	SF3A2	51	93.443	ENSXETG00000024943	sf3a2	54	96.429	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005686	U2 snRNP	-	ISS	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0071005	U2-type precatalytic spliceosome	-	ISS	Component
GO:1903241	U2-type prespliceosome assembly	-	ISS	Process