EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000025612 (Gene tree)
Gene ID: 515890
Gene Symbol: URM1
Alias: -
Full Name: Bos taurus ubiquitin related modifier 1 (URM1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 38016 bases
Position: chr11:98967372-99005387
Accession: NM_001075729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059772	Urm1	PF09138.11	4.5e-39	1	1
ENSBTAP00000035991	Urm1	PF09138.11	6.8e-26	1	1
ENSBTAP00000062696	Urm1	PF09138.11	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000070106	-	774	-	ENSBTAP00000062696	186 (aa)	-	-
ENSBTAT00000036128	-	1968	-	ENSBTAP00000035991	150 (aa)	-	Q148F0
ENSBTAT00000068538	-	2829	XM_005213259	ENSBTAP00000059772	101 (aa)	XP_005213316	UPI00005806CB

Gene Model

Click here to download ENSBTAG00000025612's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta04122	Sulfur relay system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000025612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000025612	URM1	100	95.050	ENSG00000167118	URM1	100	95.050	Homo_sapiens
ENSBTAG00000025612	URM1	100	77.228	ENSAPOG00000009382	urm1	100	77.228	Acanthochromis_polyacanthus
ENSBTAG00000025612	URM1	100	98.020	ENSAMEG00000015446	URM1	100	98.020	Ailuropoda_melanoleuca
ENSBTAG00000025612	URM1	100	58.252	ENSACIG00000005345	urm1	100	58.252	Amphilophus_citrinellus
ENSBTAG00000025612	URM1	100	78.218	ENSAPEG00000007448	urm1	100	78.218	Amphiprion_percula
ENSBTAG00000025612	URM1	100	77.228	ENSATEG00000019659	urm1	100	77.228	Anabas_testudineus
ENSBTAG00000025612	URM1	90	86.813	ENSAPLG00000008603	URM1	100	86.813	Anas_platyrhynchos
ENSBTAG00000025612	URM1	100	82.178	ENSACAG00000010428	-	100	82.178	Anolis_carolinensis
ENSBTAG00000025612	URM1	100	97.030	ENSANAG00000036717	URM1	100	97.030	Aotus_nancymaae
ENSBTAG00000025612	URM1	100	80.198	ENSACLG00000022484	urm1	100	80.198	Astatotilapia_calliptera
ENSBTAG00000025612	URM1	89	65.556	ENSAMXG00000042562	urm1	89	65.556	Astyanax_mexicanus
ENSBTAG00000025612	URM1	98	33.010	WBGene00185048	urm-1	99	33.010	Caenorhabditis_elegans
ENSBTAG00000025612	URM1	100	98.020	ENSCJAG00000020036	URM1	100	98.020	Callithrix_jacchus
ENSBTAG00000025612	URM1	100	99.010	ENSCAFG00000023618	URM1	100	99.010	Canis_familiaris
ENSBTAG00000025612	URM1	64	100.000	ENSCHIG00000012547	-	67	100.000	Capra_hircus
ENSBTAG00000025612	URM1	100	89.109	ENSTSYG00000028376	URM1	100	89.109	Carlito_syrichta
ENSBTAG00000025612	URM1	64	96.923	ENSCAPG00000002189	-	100	96.923	Cavia_aperea
ENSBTAG00000025612	URM1	100	98.020	ENSCPOG00000039069	URM1	100	98.020	Cavia_porcellus
ENSBTAG00000025612	URM1	100	97.030	ENSCCAG00000032510	URM1	100	97.030	Cebus_capucinus
ENSBTAG00000025612	URM1	100	97.030	ENSCATG00000033068	URM1	100	97.030	Cercocebus_atys
ENSBTAG00000025612	URM1	100	98.020	ENSCLAG00000001791	URM1	100	98.020	Chinchilla_lanigera
ENSBTAG00000025612	URM1	78	96.203	ENSCSAG00000014200	URM1	99	68.750	Chlorocebus_sabaeus
ENSBTAG00000025612	URM1	100	86.139	ENSCPBG00000025196	URM1	100	86.139	Chrysemys_picta_bellii
ENSBTAG00000025612	URM1	100	97.030	ENSCANG00000012760	URM1	100	97.030	Colobus_angolensis_palliatus
ENSBTAG00000025612	URM1	100	93.069	ENSCGRG00001023888	Urm1	100	93.069	Cricetulus_griseus_chok1gshd
ENSBTAG00000025612	URM1	100	93.069	ENSCGRG00000005358	Urm1	100	93.069	Cricetulus_griseus_crigri
ENSBTAG00000025612	URM1	100	81.188	ENSCSEG00000016193	urm1	100	81.188	Cynoglossus_semilaevis
ENSBTAG00000025612	URM1	84	64.706	ENSCVAG00000011864	urm1	77	64.706	Cyprinodon_variegatus
ENSBTAG00000025612	URM1	100	77.228	ENSDARG00000091198	urm1	100	77.228	Danio_rerio
ENSBTAG00000025612	URM1	80	91.358	ENSDNOG00000039086	URM1	56	92.405	Dasypus_novemcinctus
ENSBTAG00000025612	URM1	100	93.069	ENSDORG00000028424	Urm1	100	93.069	Dipodomys_ordii
ENSBTAG00000025612	URM1	100	61.765	FBgn0053276	Urm1	100	61.765	Drosophila_melanogaster
ENSBTAG00000025612	URM1	100	92.079	ENSETEG00000000039	-	100	92.079	Echinops_telfairi
ENSBTAG00000025612	URM1	64	95.385	ENSEASG00005016204	-	60	95.385	Equus_asinus_asinus
ENSBTAG00000025612	URM1	100	94.059	ENSEEUG00000012945	URM1	100	94.059	Erinaceus_europaeus
ENSBTAG00000025612	URM1	100	77.228	ENSELUG00000006757	URM1	100	77.228	Esox_lucius
ENSBTAG00000025612	URM1	100	96.040	ENSFCAG00000005842	URM1	100	96.040	Felis_catus
ENSBTAG00000025612	URM1	90	85.714	ENSFALG00000001360	URM1	100	85.714	Ficedula_albicollis
ENSBTAG00000025612	URM1	100	96.040	ENSFDAG00000013113	URM1	100	96.040	Fukomys_damarensis
ENSBTAG00000025612	URM1	100	75.248	ENSGMOG00000006245	urm1	100	75.248	Gadus_morhua
ENSBTAG00000025612	URM1	100	86.139	ENSGALG00000004971	URM1	100	86.139	Gallus_gallus
ENSBTAG00000025612	URM1	100	79.208	ENSGAFG00000007518	urm1	100	79.208	Gambusia_affinis
ENSBTAG00000025612	URM1	100	79.208	ENSGACG00000017389	urm1	100	79.208	Gasterosteus_aculeatus
ENSBTAG00000025612	URM1	100	86.139	ENSGAGG00000022865	URM1	100	86.139	Gopherus_agassizii
ENSBTAG00000025612	URM1	100	95.050	ENSGGOG00000014806	URM1	100	95.050	Gorilla_gorilla
ENSBTAG00000025612	URM1	100	79.208	ENSHBUG00000001440	urm1	100	79.208	Haplochromis_burtoni
ENSBTAG00000025612	URM1	100	94.059	ENSHGLG00000016662	URM1	100	94.059	Heterocephalus_glaber_female
ENSBTAG00000025612	URM1	100	94.059	ENSHGLG00100019392	URM1	100	94.059	Heterocephalus_glaber_male
ENSBTAG00000025612	URM1	100	77.228	ENSHCOG00000002828	urm1	100	77.228	Hippocampus_comes
ENSBTAG00000025612	URM1	100	79.208	ENSIPUG00000020621	urm1	55	79.208	Ictalurus_punctatus
ENSBTAG00000025612	URM1	100	96.040	ENSSTOG00000025351	URM1	100	96.040	Ictidomys_tridecemlineatus
ENSBTAG00000025612	URM1	100	85.149	ENSJJAG00000011074	-	100	85.149	Jaculus_jaculus
ENSBTAG00000025612	URM1	100	93.069	ENSJJAG00000014799	-	100	93.069	Jaculus_jaculus
ENSBTAG00000025612	URM1	100	77.228	ENSKMAG00000011433	urm1	100	77.228	Kryptolebias_marmoratus
ENSBTAG00000025612	URM1	88	74.157	ENSLBEG00000004555	urm1	76	74.157	Labrus_bergylta
ENSBTAG00000025612	URM1	100	80.198	ENSLACG00000016968	URM1	100	80.198	Latimeria_chalumnae
ENSBTAG00000025612	URM1	100	78.218	ENSLOCG00000002768	urm1	100	78.218	Lepisosteus_oculatus
ENSBTAG00000025612	URM1	100	95.146	ENSLAFG00000002178	URM1	100	95.146	Loxodonta_africana
ENSBTAG00000025612	URM1	100	97.030	ENSMFAG00000035214	URM1	100	97.030	Macaca_fascicularis
ENSBTAG00000025612	URM1	97	90.816	ENSMMUG00000018612	URM1	99	90.816	Macaca_mulatta
ENSBTAG00000025612	URM1	100	97.030	ENSMLEG00000028542	URM1	100	97.030	Mandrillus_leucophaeus
ENSBTAG00000025612	URM1	100	80.198	ENSMAMG00000008703	urm1	100	80.198	Mastacembelus_armatus
ENSBTAG00000025612	URM1	100	80.198	ENSMZEG00005017191	urm1	100	80.198	Maylandia_zebra
ENSBTAG00000025612	URM1	90	86.813	ENSMGAG00000003812	URM1	100	86.813	Meleagris_gallopavo
ENSBTAG00000025612	URM1	100	91.089	ENSMAUG00000000479	Urm1	100	91.089	Mesocricetus_auratus
ENSBTAG00000025612	URM1	100	96.040	ENSMICG00000042967	URM1	100	96.040	Microcebus_murinus
ENSBTAG00000025612	URM1	100	91.089	ENSMOCG00000007365	Urm1	100	91.089	Microtus_ochrogaster
ENSBTAG00000025612	URM1	100	78.218	ENSMMOG00000021296	urm1	100	78.218	Mola_mola
ENSBTAG00000025612	URM1	100	89.109	ENSMODG00000023353	URM1	100	89.109	Monodelphis_domestica
ENSBTAG00000025612	URM1	100	78.218	ENSMALG00000018227	urm1	100	78.218	Monopterus_albus
ENSBTAG00000025612	URM1	100	95.050	MGP_CAROLIEiJ_G0023372	Urm1	100	95.050	Mus_caroli
ENSBTAG00000025612	URM1	100	94.059	ENSMUSG00000069020	Urm1	100	94.059	Mus_musculus
ENSBTAG00000025612	URM1	100	96.040	MGP_PahariEiJ_G0024829	Urm1	100	96.040	Mus_pahari
ENSBTAG00000025612	URM1	100	96.040	MGP_SPRETEiJ_G0024289	Urm1	100	96.040	Mus_spretus
ENSBTAG00000025612	URM1	100	96.040	ENSMPUG00000013184	URM1	100	96.040	Mustela_putorius_furo
ENSBTAG00000025612	URM1	78	97.468	ENSMLUG00000007275	URM1	100	97.468	Myotis_lucifugus
ENSBTAG00000025612	URM1	100	95.050	ENSNGAG00000007112	Urm1	100	95.050	Nannospalax_galili
ENSBTAG00000025612	URM1	100	80.198	ENSNBRG00000009012	urm1	100	80.198	Neolamprologus_brichardi
ENSBTAG00000025612	URM1	100	96.040	ENSNLEG00000031211	URM1	100	96.040	Nomascus_leucogenys
ENSBTAG00000025612	URM1	100	90.099	ENSMEUG00000014147	-	100	90.099	Notamacropus_eugenii
ENSBTAG00000025612	URM1	100	98.020	ENSOPRG00000002058	URM1	100	98.020	Ochotona_princeps
ENSBTAG00000025612	URM1	100	96.040	ENSODEG00000017296	URM1	100	96.040	Octodon_degus
ENSBTAG00000025612	URM1	100	80.198	ENSONIG00000003910	urm1	100	80.198	Oreochromis_niloticus
ENSBTAG00000025612	URM1	96	80.412	ENSOANG00000003949	-	100	80.412	Ornithorhynchus_anatinus
ENSBTAG00000025612	URM1	97	96.939	ENSOCUG00000008848	URM1	100	96.939	Oryctolagus_cuniculus
ENSBTAG00000025612	URM1	100	83.168	ENSORLG00000024432	urm1	100	83.168	Oryzias_latipes
ENSBTAG00000025612	URM1	100	82.178	ENSORLG00020000333	urm1	100	82.178	Oryzias_latipes_hni
ENSBTAG00000025612	URM1	91	81.522	ENSORLG00015001370	urm1	68	81.522	Oryzias_latipes_hsok
ENSBTAG00000025612	URM1	100	83.168	ENSOMEG00000023257	urm1	100	83.168	Oryzias_melastigma
ENSBTAG00000025612	URM1	100	96.040	ENSOGAG00000001445	URM1	100	96.040	Otolemur_garnettii
ENSBTAG00000025612	URM1	100	100.000	ENSOARG00000010218	URM1	100	100.000	Ovis_aries
ENSBTAG00000025612	URM1	100	95.050	ENSPPAG00000030946	URM1	100	95.050	Pan_paniscus
ENSBTAG00000025612	URM1	100	97.030	ENSPPRG00000008861	URM1	100	97.030	Panthera_pardus
ENSBTAG00000025612	URM1	100	96.040	ENSPTIG00000012500	URM1	100	96.040	Panthera_tigris_altaica
ENSBTAG00000025612	URM1	100	95.050	ENSPTRG00000021427	URM1	100	95.050	Pan_troglodytes
ENSBTAG00000025612	URM1	100	97.030	ENSPANG00000025883	URM1	100	97.030	Papio_anubis
ENSBTAG00000025612	URM1	100	75.248	ENSPKIG00000021455	urm1	100	75.248	Paramormyrops_kingsleyae
ENSBTAG00000025612	URM1	100	84.158	ENSPSIG00000014442	URM1	100	84.158	Pelodiscus_sinensis
ENSBTAG00000025612	URM1	78	82.278	ENSPMGG00000023974	urm1	68	82.500	Periophthalmus_magnuspinnatus
ENSBTAG00000025612	URM1	100	80.198	ENSPMAG00000007668	urm1	100	80.198	Petromyzon_marinus
ENSBTAG00000025612	URM1	87	94.318	ENSPCIG00000026786	-	84	94.318	Phascolarctos_cinereus
ENSBTAG00000025612	URM1	100	79.208	ENSPFOG00000019694	urm1	100	79.208	Poecilia_formosa
ENSBTAG00000025612	URM1	100	79.208	ENSPLAG00000021729	urm1	100	79.208	Poecilia_latipinna
ENSBTAG00000025612	URM1	100	79.208	ENSPMEG00000009764	urm1	100	79.208	Poecilia_mexicana
ENSBTAG00000025612	URM1	100	79.208	ENSPREG00000008611	urm1	100	79.208	Poecilia_reticulata
ENSBTAG00000025612	URM1	100	94.059	ENSPPYG00000019649	-	100	94.059	Pongo_abelii
ENSBTAG00000025612	URM1	78	98.734	ENSPCAG00000015239	URM1	100	98.734	Procavia_capensis
ENSBTAG00000025612	URM1	100	96.040	ENSPCOG00000021449	URM1	100	96.040	Propithecus_coquereli
ENSBTAG00000025612	URM1	100	96.040	ENSPVAG00000001227	URM1	100	96.040	Pteropus_vampyrus
ENSBTAG00000025612	URM1	100	80.198	ENSPNYG00000012446	urm1	100	80.198	Pundamilia_nyererei
ENSBTAG00000025612	URM1	100	78.218	ENSPNAG00000017145	urm1	100	78.218	Pygocentrus_nattereri
ENSBTAG00000025612	URM1	100	95.050	ENSRNOG00000026636	Urm1	100	95.050	Rattus_norvegicus
ENSBTAG00000025612	URM1	100	97.030	ENSRBIG00000041054	URM1	100	97.030	Rhinopithecus_bieti
ENSBTAG00000025612	URM1	100	97.030	ENSRROG00000038638	URM1	100	97.030	Rhinopithecus_roxellana
ENSBTAG00000025612	URM1	96	41.414	YIL008W	-	99	41.414	Saccharomyces_cerevisiae
ENSBTAG00000025612	URM1	100	98.020	ENSSBOG00000030293	URM1	100	98.020	Saimiri_boliviensis_boliviensis
ENSBTAG00000025612	URM1	100	77.228	ENSSFOG00015000673	urm1	56	77.228	Scleropages_formosus
ENSBTAG00000025612	URM1	100	79.208	ENSSMAG00000019927	urm1	100	79.208	Scophthalmus_maximus
ENSBTAG00000025612	URM1	100	80.198	ENSSDUG00000000566	urm1	100	80.198	Seriola_dumerili
ENSBTAG00000025612	URM1	100	80.198	ENSSLDG00000012250	urm1	100	80.198	Seriola_lalandi_dorsalis
ENSBTAG00000025612	URM1	100	85.149	ENSSPUG00000015548	URM1	100	85.149	Sphenodon_punctatus
ENSBTAG00000025612	URM1	100	80.198	ENSSPAG00000001097	urm1	100	80.198	Stegastes_partitus
ENSBTAG00000025612	URM1	100	95.050	ENSSSCG00000005649	URM1	100	95.050	Sus_scrofa
ENSBTAG00000025612	URM1	90	85.714	ENSTGUG00000003654	URM1	100	85.714	Taeniopygia_guttata
ENSBTAG00000025612	URM1	100	80.198	ENSTRUG00000008530	urm1	100	80.198	Takifugu_rubripes
ENSBTAG00000025612	URM1	100	77.451	ENSTNIG00000013204	urm1	100	77.451	Tetraodon_nigroviridis
ENSBTAG00000025612	URM1	100	71.287	ENSTBEG00000002675	-	100	71.287	Tupaia_belangeri
ENSBTAG00000025612	URM1	100	93.069	ENSTTRG00000016490	URM1	100	93.069	Tursiops_truncatus
ENSBTAG00000025612	URM1	100	97.030	ENSUAMG00000020279	URM1	100	97.030	Ursus_americanus
ENSBTAG00000025612	URM1	78	96.203	ENSUMAG00000022029	-	78	96.203	Ursus_maritimus
ENSBTAG00000025612	URM1	64	80.000	ENSXCOG00000004982	urm1	80	80.000	Xiphophorus_couchianus
ENSBTAG00000025612	URM1	100	79.208	ENSXMAG00000001680	urm1	100	79.208	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002098	tRNA wobble uridine modification	-	ISS	Process
GO:0005829	cytosol	-	IEA	Component
GO:0032447	protein urmylation	-	IEA	Process
GO:0034227	tRNA thio-modification	-	ISS	Process