EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000026909 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 2150 bases
Position: chr7:110516617-110518766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000054623	RRM_1	PF00076.22	7.2e-46	1	3
ENSBTAP00000054623	RRM_1	PF00076.22	7.2e-46	2	3
ENSBTAP00000054623	RRM_1	PF00076.22	7.2e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000064073	-	1350	-	ENSBTAP00000054623	449 (aa)	-	G3MYJ0

Gene Model

Click here to download ENSBTAG00000026909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000026909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000026909	-	50	32.184	ENSBTAG00000046358	PABPC1	57	32.184
ENSBTAG00000026909	-	98	96.203	ENSBTAG00000016174	NCL	78	96.203
ENSBTAG00000026909	-	87	85.990	ENSBTAG00000050728	-	89	85.749
ENSBTAG00000026909	-	97	75.652	ENSBTAG00000051320	-	86	79.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000026909	-	95	92.642	ENSG00000115053	NCL	96	84.507	Homo_sapiens
ENSBTAG00000026909	-	95	92.977	ENSAMEG00000016289	NCL	76	92.977	Ailuropoda_melanoleuca
ENSBTAG00000026909	-	93	77.863	ENSANAG00000024378	-	85	70.277	Aotus_nancymaae
ENSBTAG00000026909	-	95	92.642	ENSANAG00000035814	-	72	92.642	Aotus_nancymaae
ENSBTAG00000026909	-	95	92.642	ENSCJAG00000013538	NCL	73	92.642	Callithrix_jacchus
ENSBTAG00000026909	-	86	92.050	ENSCAFG00000011037	NCL	69	91.667	Canis_familiaris
ENSBTAG00000026909	-	84	92.977	ENSCAFG00020023145	NCL	73	92.977	Canis_lupus_dingo
ENSBTAG00000026909	-	95	92.642	ENSCHIG00000021052	-	87	84.541	Capra_hircus
ENSBTAG00000026909	-	84	94.314	ENSCHIG00000010894	-	75	94.314	Capra_hircus
ENSBTAG00000026909	-	86	84.937	ENSCHIG00000026149	-	70	82.996	Capra_hircus
ENSBTAG00000026909	-	86	74.477	ENSCHIG00000012143	-	91	72.358	Capra_hircus
ENSBTAG00000026909	-	85	90.795	ENSTSYG00000004355	-	68	90.417	Carlito_syrichta
ENSBTAG00000026909	-	82	77.093	ENSTSYG00000036886	-	69	74.583	Carlito_syrichta
ENSBTAG00000026909	-	87	86.709	ENSTSYG00000029779	-	69	84.146	Carlito_syrichta
ENSBTAG00000026909	-	80	89.958	ENSCAPG00000009405	NCL	73	89.583	Cavia_aperea
ENSBTAG00000026909	-	83	89.958	ENSCPOG00000001034	NCL	54	89.583	Cavia_porcellus
ENSBTAG00000026909	-	85	91.632	ENSCCAG00000021040	-	64	91.250	Cebus_capucinus
ENSBTAG00000026909	-	95	92.642	ENSCATG00000037033	NCL	72	92.642	Cercocebus_atys
ENSBTAG00000026909	-	85	89.958	ENSCLAG00000013080	NCL	68	89.583	Chinchilla_lanigera
ENSBTAG00000026909	-	53	91.213	ENSCSAG00000006660	NCL	67	91.213	Chlorocebus_sabaeus
ENSBTAG00000026909	-	56	84.937	ENSCANG00000036756	NCL	71	84.583	Colobus_angolensis_palliatus
ENSBTAG00000026909	-	87	87.815	ENSCGRG00001024315	-	75	87.448	Cricetulus_griseus_chok1gshd
ENSBTAG00000026909	-	88	76.033	ENSCGRG00001022350	-	85	75.314	Cricetulus_griseus_chok1gshd
ENSBTAG00000026909	-	88	76.033	ENSCGRG00000000507	-	55	75.314	Cricetulus_griseus_crigri
ENSBTAG00000026909	-	96	78.073	ENSDNOG00000046347	-	64	79.310	Dasypus_novemcinctus
ENSBTAG00000026909	-	82	90.871	ENSDNOG00000010783	-	64	90.496	Dasypus_novemcinctus
ENSBTAG00000026909	-	83	83.453	ENSDORG00000012513	-	55	82.979	Dipodomys_ordii
ENSBTAG00000026909	-	83	77.305	ENSDORG00000023596	-	71	77.536	Dipodomys_ordii
ENSBTAG00000026909	-	63	56.711	ENSETEG00000008553	-	50	61.181	Echinops_telfairi
ENSBTAG00000026909	-	71	88.655	ENSETEG00000018937	-	62	88.285	Echinops_telfairi
ENSBTAG00000026909	-	53	87.342	ENSETEG00000014756	-	78	87.448	Echinops_telfairi
ENSBTAG00000026909	-	81	63.675	ENSETEG00000008139	-	71	63.404	Echinops_telfairi
ENSBTAG00000026909	-	92	92.977	ENSEASG00005008488	NCL	76	92.977	Equus_asinus_asinus
ENSBTAG00000026909	-	96	92.977	ENSECAG00000021868	NCL	77	92.977	Equus_caballus
ENSBTAG00000026909	-	71	84.519	ENSEEUG00000005913	NCL	62	77.239	Erinaceus_europaeus
ENSBTAG00000026909	-	95	92.977	ENSFCAG00000027622	NCL	76	92.977	Felis_catus
ENSBTAG00000026909	-	84	90.377	ENSFDAG00000014291	NCL	67	90.000	Fukomys_damarensis
ENSBTAG00000026909	-	95	92.642	ENSGGOG00000004300	NCL	88	79.905	Gorilla_gorilla
ENSBTAG00000026909	-	86	63.591	ENSHGLG00000005133	-	89	61.928	Heterocephalus_glaber_female
ENSBTAG00000026909	-	84	82.540	ENSHGLG00000011069	-	58	85.833	Heterocephalus_glaber_female
ENSBTAG00000026909	-	85	90.795	ENSHGLG00000002031	-	68	90.417	Heterocephalus_glaber_female
ENSBTAG00000026909	-	85	90.377	ENSHGLG00100014537	-	69	90.000	Heterocephalus_glaber_male
ENSBTAG00000026909	-	84	81.349	ENSHGLG00100000745	-	62	84.583	Heterocephalus_glaber_male
ENSBTAG00000026909	-	84	84.507	ENSJJAG00000016165	Ncl	69	84.507	Jaculus_jaculus
ENSBTAG00000026909	-	90	74.895	ENSLAFG00000013061	NCL	84	76.056	Loxodonta_africana
ENSBTAG00000026909	-	95	92.642	ENSMFAG00000040385	NCL	77	87.755	Macaca_fascicularis
ENSBTAG00000026909	-	95	92.642	ENSMMUG00000018094	NCL	88	79.767	Macaca_mulatta
ENSBTAG00000026909	-	96	92.642	ENSMNEG00000023839	NCL	77	92.642	Macaca_nemestrina
ENSBTAG00000026909	-	95	92.642	ENSMLEG00000028935	NCL	72	92.642	Mandrillus_leucophaeus
ENSBTAG00000026909	-	88	71.498	ENSMICG00000029975	-	91	71.498	Microcebus_murinus
ENSBTAG00000026909	-	95	92.308	ENSMICG00000002538	-	68	90.833	Microcebus_murinus
ENSBTAG00000026909	-	82	83.613	MGP_CAROLIEiJ_G0014362	Ncl	68	83.264	Mus_caroli
ENSBTAG00000026909	-	82	83.193	ENSMUSG00000026234	Ncl	68	82.845	Mus_musculus
ENSBTAG00000026909	-	82	83.613	MGP_PahariEiJ_G0027599	Ncl	53	83.264	Mus_pahari
ENSBTAG00000026909	-	82	83.193	MGP_SPRETEiJ_G0015164	Ncl	68	82.845	Mus_spretus
ENSBTAG00000026909	-	95	92.642	ENSMLUG00000014547	NCL	76	92.642	Myotis_lucifugus
ENSBTAG00000026909	-	80	69.925	ENSNGAG00000006188	-	61	70.423	Nannospalax_galili
ENSBTAG00000026909	-	87	88.235	ENSNGAG00000002454	-	75	87.866	Nannospalax_galili
ENSBTAG00000026909	-	71	85.106	ENSNLEG00000014107	-	55	85.106	Nomascus_leucogenys
ENSBTAG00000026909	-	92	74.265	ENSODEG00000007803	-	57	75.000	Octodon_degus
ENSBTAG00000026909	-	95	86.622	ENSODEG00000003281	-	64	86.585	Octodon_degus
ENSBTAG00000026909	-	83	81.172	ENSODEG00000002441	-	92	69.976	Octodon_degus
ENSBTAG00000026909	-	81	87.764	ENSODEG00000002748	-	56	87.448	Octodon_degus
ENSBTAG00000026909	-	83	88.285	ENSOCUG00000004312	NCL	69	88.285	Oryctolagus_cuniculus
ENSBTAG00000026909	-	90	90.377	ENSOGAG00000027852	NCL	65	90.000	Otolemur_garnettii
ENSBTAG00000026909	-	50	82.270	ENSOARG00000013270	-	53	82.270	Ovis_aries
ENSBTAG00000026909	-	97	91.391	ENSOARG00000020709	-	63	91.391	Ovis_aries
ENSBTAG00000026909	-	70	91.882	ENSOARG00000013710	-	73	91.882	Ovis_aries
ENSBTAG00000026909	-	80	75.000	ENSOARG00000004072	-	68	77.406	Ovis_aries
ENSBTAG00000026909	-	97	92.642	ENSPPAG00000011619	NCL	88	79.905	Pan_paniscus
ENSBTAG00000026909	-	95	92.977	ENSPPRG00000012603	NCL	77	92.977	Panthera_pardus
ENSBTAG00000026909	-	94	92.977	ENSPTIG00000010393	NCL	76	92.977	Panthera_tigris_altaica
ENSBTAG00000026909	-	95	92.642	ENSPTRG00000013025	NCL	88	79.905	Pan_troglodytes
ENSBTAG00000026909	-	95	92.642	ENSPANG00000010292	NCL	72	92.642	Papio_anubis
ENSBTAG00000026909	-	95	92.642	ENSPPYG00000013265	NCL	71	92.642	Pongo_abelii
ENSBTAG00000026909	-	85	91.632	ENSPCOG00000003051	-	68	91.250	Propithecus_coquereli
ENSBTAG00000026909	-	90	87.764	ENSPCOG00000004160	-	93	87.866	Propithecus_coquereli
ENSBTAG00000026909	-	95	92.642	ENSPVAG00000000297	NCL	77	92.642	Pteropus_vampyrus
ENSBTAG00000026909	-	82	87.395	ENSRNOG00000018273	Ncl	68	87.029	Rattus_norvegicus
ENSBTAG00000026909	-	94	67.446	ENSRBIG00000035396	-	99	67.641	Rhinopithecus_bieti
ENSBTAG00000026909	-	83	87.109	ENSRBIG00000037525	-	56	89.024	Rhinopithecus_bieti
ENSBTAG00000026909	-	96	92.333	ENSRROG00000028756	-	87	79.376	Rhinopithecus_roxellana
ENSBTAG00000026909	-	95	87.342	ENSRROG00000036103	-	86	77.202	Rhinopithecus_roxellana
ENSBTAG00000026909	-	96	92.642	ENSSBOG00000029193	-	74	92.642	Saimiri_boliviensis_boliviensis
ENSBTAG00000026909	-	84	68.766	ENSSBOG00000023094	-	89	70.886	Saimiri_boliviensis_boliviensis
ENSBTAG00000026909	-	63	86.622	ENSSBOG00000027549	-	91	83.750	Saimiri_boliviensis_boliviensis
ENSBTAG00000026909	-	96	92.667	ENSSSCG00000016275	NCL	80	92.667	Sus_scrofa
ENSBTAG00000026909	-	75	82.474	ENSTBEG00000001546	-	62	82.474	Tupaia_belangeri
ENSBTAG00000026909	-	76	76.860	ENSTBEG00000002469	-	61	76.250	Tupaia_belangeri
ENSBTAG00000026909	-	85	91.213	ENSTTRG00000009094	NCL	68	89.069	Tursiops_truncatus
ENSBTAG00000026909	-	85	92.977	ENSUAMG00000005639	NCL	81	92.977	Ursus_americanus
ENSBTAG00000026909	-	95	92.977	ENSUMAG00000015789	NCL	77	92.977	Ursus_maritimus
ENSBTAG00000026909	-	94	84.507	ENSVPAG00000001796	NCL	51	88.837	Vicugna_pacos
ENSBTAG00000026909	-	96	92.308	ENSVVUG00000025564	NCL	72	90.833	Vulpes_vulpes