EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000027795 (Gene tree)
Gene ID: 513309
Gene Symbol: GFM1
Alias: -
Full Name: Bos taurus G elongation factor mitochondrial 1 (GFM1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 50665 bases
Position: chr1:108852511-108903175
Accession: NM_001206149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000039865	GTP_EFTU	PF00009.27	9.8e-64	1	1
ENSBTAP00000039865	GTP_EFTU_D2	PF03144.25	1.4e-16	1	1
ENSBTAP00000039865	EFG_IV	PF03764.18	4.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000040085	-	3462	XM_024983695	ENSBTAP00000039865	753 (aa)	XP_024839463	E1BEJ3

Gene Model

Click here to download ENSBTAG00000027795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000027795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000027795	GFM1	73	38.926	ENSBTAG00000004258	EEF2	73	38.926
ENSBTAG00000027795	GFM1	55	32.212	ENSBTAG00000000285	GUF1	59	32.212
ENSBTAG00000027795	GFM1	92	34.705	ENSBTAG00000015519	GFM2	94	33.097

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000027795	GFM1	98	92.663	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSBTAG00000027795	GFM1	89	79.641	ENSAPOG00000016489	gfm1	96	79.491	Acanthochromis_polyacanthus
ENSBTAG00000027795	GFM1	98	93.775	ENSAMEG00000013542	GFM1	100	93.767	Ailuropoda_melanoleuca
ENSBTAG00000027795	GFM1	95	76.356	ENSACIG00000014465	gfm1	93	76.356	Amphilophus_citrinellus
ENSBTAG00000027795	GFM1	95	80.785	ENSAOCG00000006023	gfm1	95	80.785	Amphiprion_ocellaris
ENSBTAG00000027795	GFM1	95	80.785	ENSAPEG00000024499	gfm1	99	80.168	Amphiprion_percula
ENSBTAG00000027795	GFM1	95	80.362	ENSATEG00000013789	gfm1	96	80.362	Anabas_testudineus
ENSBTAG00000027795	GFM1	95	82.893	ENSAPLG00000005022	GFM1	99	82.893	Anas_platyrhynchos
ENSBTAG00000027795	GFM1	96	82.369	ENSACAG00000006829	GFM1	98	82.369	Anolis_carolinensis
ENSBTAG00000027795	GFM1	100	91.777	ENSANAG00000035983	GFM1	100	91.777	Aotus_nancymaae
ENSBTAG00000027795	GFM1	95	82.173	ENSACLG00000016586	gfm1	98	80.721	Astatotilapia_calliptera
ENSBTAG00000027795	GFM1	100	78.411	ENSAMXG00000013435	gfm1	98	79.487	Astyanax_mexicanus
ENSBTAG00000027795	GFM1	97	55.163	WBGene00009246	gfm-1	99	55.020	Caenorhabditis_elegans
ENSBTAG00000027795	GFM1	100	91.910	ENSCJAG00000000363	GFM1	100	91.910	Callithrix_jacchus
ENSBTAG00000027795	GFM1	98	93.767	ENSCAFG00000009006	GFM1	100	94.822	Canis_familiaris
ENSBTAG00000027795	GFM1	98	94.181	ENSCAFG00020005878	GFM1	100	93.899	Canis_lupus_dingo
ENSBTAG00000027795	GFM1	100	98.938	ENSCHIG00000015220	GFM1	100	98.938	Capra_hircus
ENSBTAG00000027795	GFM1	100	94.164	ENSTSYG00000002013	GFM1	100	94.164	Carlito_syrichta
ENSBTAG00000027795	GFM1	96	81.405	ENSCAPG00000005699	GFM1	98	81.405	Cavia_aperea
ENSBTAG00000027795	GFM1	100	92.573	ENSCPOG00000001194	GFM1	100	92.573	Cavia_porcellus
ENSBTAG00000027795	GFM1	100	91.910	ENSCCAG00000025561	GFM1	100	91.910	Cebus_capucinus
ENSBTAG00000027795	GFM1	100	91.777	ENSCATG00000037622	GFM1	100	91.777	Cercocebus_atys
ENSBTAG00000027795	GFM1	98	91.892	ENSCLAG00000002503	GFM1	100	91.391	Chinchilla_lanigera
ENSBTAG00000027795	GFM1	100	91.777	ENSCSAG00000012162	GFM1	100	91.777	Chlorocebus_sabaeus
ENSBTAG00000027795	GFM1	100	84.085	ENSCHOG00000004867	GFM1	100	84.085	Choloepus_hoffmanni
ENSBTAG00000027795	GFM1	99	82.124	ENSCPBG00000018367	GFM1	99	82.544	Chrysemys_picta_bellii
ENSBTAG00000027795	GFM1	95	59.336	ENSCING00000011960	-	94	59.336	Ciona_intestinalis
ENSBTAG00000027795	GFM1	95	59.778	ENSCSAVG00000008514	-	99	59.778	Ciona_savignyi
ENSBTAG00000027795	GFM1	98	92.663	ENSCANG00000031714	GFM1	100	92.175	Colobus_angolensis_palliatus
ENSBTAG00000027795	GFM1	100	93.493	ENSCGRG00001022095	GFM1	100	93.493	Cricetulus_griseus_chok1gshd
ENSBTAG00000027795	GFM1	100	93.493	ENSCGRG00000012043	GFM1	100	93.493	Cricetulus_griseus_crigri
ENSBTAG00000027795	GFM1	95	76.602	ENSCSEG00000017088	gfm1	98	76.602	Cynoglossus_semilaevis
ENSBTAG00000027795	GFM1	96	82.500	ENSCVAG00000004126	gfm1	99	81.408	Cyprinodon_variegatus
ENSBTAG00000027795	GFM1	100	76.760	ENSDARG00000063624	gfm1	96	79.109	Danio_rerio
ENSBTAG00000027795	GFM1	54	91.687	ENSDNOG00000016385	-	100	91.687	Dasypus_novemcinctus
ENSBTAG00000027795	GFM1	100	89.655	ENSDORG00000014165	Gfm1	100	89.655	Dipodomys_ordii
ENSBTAG00000027795	GFM1	94	67.701	FBgn0263133	mEFG1	95	67.701	Drosophila_melanogaster
ENSBTAG00000027795	GFM1	98	83.266	ENSETEG00000019197	GFM1	100	83.069	Echinops_telfairi
ENSBTAG00000027795	GFM1	90	66.914	ENSEBUG00000012794	gfm1	99	66.914	Eptatretus_burgeri
ENSBTAG00000027795	GFM1	96	70.345	ENSEEUG00000000429	GFM1	99	70.345	Erinaceus_europaeus
ENSBTAG00000027795	GFM1	100	76.096	ENSELUG00000014728	gfm1	98	77.143	Esox_lucius
ENSBTAG00000027795	GFM1	98	95.535	ENSFCAG00000013291	GFM1	100	95.358	Felis_catus
ENSBTAG00000027795	GFM1	90	82.963	ENSFALG00000007619	GFM1	100	82.963	Ficedula_albicollis
ENSBTAG00000027795	GFM1	100	91.512	ENSFDAG00000016559	GFM1	100	91.512	Fukomys_damarensis
ENSBTAG00000027795	GFM1	95	81.616	ENSFHEG00000006091	gfm1	96	81.616	Fundulus_heteroclitus
ENSBTAG00000027795	GFM1	95	79.224	ENSGMOG00000010161	gfm1	99	79.224	Gadus_morhua
ENSBTAG00000027795	GFM1	98	81.140	ENSGALG00000009634	GFM1	99	81.140	Gallus_gallus
ENSBTAG00000027795	GFM1	95	82.033	ENSGAFG00000012527	gfm1	96	82.033	Gambusia_affinis
ENSBTAG00000027795	GFM1	99	77.586	ENSGACG00000009864	gfm1	97	79.310	Gasterosteus_aculeatus
ENSBTAG00000027795	GFM1	98	92.935	ENSGGOG00000003085	GFM1	100	92.440	Gorilla_gorilla
ENSBTAG00000027795	GFM1	95	82.312	ENSHBUG00000002120	gfm1	96	82.312	Haplochromis_burtoni
ENSBTAG00000027795	GFM1	100	92.308	ENSHGLG00000016855	GFM1	100	92.308	Heterocephalus_glaber_female
ENSBTAG00000027795	GFM1	100	92.308	ENSHGLG00100013049	GFM1	100	92.308	Heterocephalus_glaber_male
ENSBTAG00000027795	GFM1	97	79.917	ENSHCOG00000007638	gfm1	97	80.909	Hippocampus_comes
ENSBTAG00000027795	GFM1	100	77.955	ENSIPUG00000005873	gfm1	97	80.000	Ictalurus_punctatus
ENSBTAG00000027795	GFM1	98	91.870	ENSSTOG00000010150	GFM1	99	91.870	Ictidomys_tridecemlineatus
ENSBTAG00000027795	GFM1	100	92.165	ENSJJAG00000016447	Gfm1	100	92.165	Jaculus_jaculus
ENSBTAG00000027795	GFM1	95	79.944	ENSKMAG00000020768	gfm1	96	79.944	Kryptolebias_marmoratus
ENSBTAG00000027795	GFM1	93	80.599	ENSLBEG00000021315	gfm1	100	80.599	Labrus_bergylta
ENSBTAG00000027795	GFM1	96	80.933	ENSLACG00000012295	GFM1	99	80.933	Latimeria_chalumnae
ENSBTAG00000027795	GFM1	95	75.346	ENSLOCG00000003778	gfm1	99	75.346	Lepisosteus_oculatus
ENSBTAG00000027795	GFM1	97	91.045	ENSLAFG00000010945	GFM1	100	89.793	Loxodonta_africana
ENSBTAG00000027795	GFM1	100	92.042	ENSMFAG00000035731	GFM1	100	92.042	Macaca_fascicularis
ENSBTAG00000027795	GFM1	100	92.175	ENSMMUG00000004961	GFM1	100	92.175	Macaca_mulatta
ENSBTAG00000027795	GFM1	100	92.175	ENSMNEG00000033245	GFM1	100	92.175	Macaca_nemestrina
ENSBTAG00000027795	GFM1	96	90.897	ENSMLEG00000030908	GFM1	100	90.713	Mandrillus_leucophaeus
ENSBTAG00000027795	GFM1	95	81.755	ENSMAMG00000011760	gfm1	96	81.755	Mastacembelus_armatus
ENSBTAG00000027795	GFM1	95	82.312	ENSMZEG00005016639	gfm1	96	82.312	Maylandia_zebra
ENSBTAG00000027795	GFM1	95	82.312	ENSMGAG00000010641	GFM1	96	82.312	Meleagris_gallopavo
ENSBTAG00000027795	GFM1	99	94.631	ENSMAUG00000000611	Gfm1	99	94.744	Mesocricetus_auratus
ENSBTAG00000027795	GFM1	98	94.158	ENSMICG00000049086	GFM1	100	93.767	Microcebus_murinus
ENSBTAG00000027795	GFM1	100	93.625	ENSMOCG00000000465	Gfm1	100	93.625	Microtus_ochrogaster
ENSBTAG00000027795	GFM1	95	80.780	ENSMMOG00000012538	gfm1	97	80.780	Mola_mola
ENSBTAG00000027795	GFM1	96	87.190	ENSMODG00000015673	GFM1	98	87.190	Monodelphis_domestica
ENSBTAG00000027795	GFM1	99	78.763	ENSMALG00000012508	gfm1	96	80.529	Monopterus_albus
ENSBTAG00000027795	GFM1	100	93.227	MGP_CAROLIEiJ_G0025052	Gfm1	100	93.227	Mus_caroli
ENSBTAG00000027795	GFM1	100	93.227	ENSMUSG00000027774	Gfm1	100	93.227	Mus_musculus
ENSBTAG00000027795	GFM1	100	93.227	MGP_PahariEiJ_G0026495	Gfm1	100	93.227	Mus_pahari
ENSBTAG00000027795	GFM1	100	93.227	MGP_SPRETEiJ_G0025994	Gfm1	100	93.227	Mus_spretus
ENSBTAG00000027795	GFM1	100	93.634	ENSMPUG00000002859	GFM1	100	93.634	Mustela_putorius_furo
ENSBTAG00000027795	GFM1	100	94.430	ENSMLUG00000000452	GFM1	100	94.430	Myotis_lucifugus
ENSBTAG00000027795	GFM1	100	91.766	ENSNGAG00000012375	Gfm1	100	91.766	Nannospalax_galili
ENSBTAG00000027795	GFM1	95	82.033	ENSNBRG00000004631	gfm1	98	82.033	Neolamprologus_brichardi
ENSBTAG00000027795	GFM1	98	93.071	ENSNLEG00000004176	GFM1	100	92.573	Nomascus_leucogenys
ENSBTAG00000027795	GFM1	91	78.655	ENSMEUG00000007784	GFM1	99	78.770	Notamacropus_eugenii
ENSBTAG00000027795	GFM1	100	89.523	ENSOPRG00000009860	GFM1	99	91.144	Ochotona_princeps
ENSBTAG00000027795	GFM1	98	92.828	ENSODEG00000004316	GFM1	100	92.308	Octodon_degus
ENSBTAG00000027795	GFM1	95	82.312	ENSONIG00000003772	gfm1	96	82.312	Oreochromis_niloticus
ENSBTAG00000027795	GFM1	98	93.505	ENSOCUG00000013561	GFM1	100	93.236	Oryctolagus_cuniculus
ENSBTAG00000027795	GFM1	94	81.497	ENSORLG00000006487	gfm1	100	81.497	Oryzias_latipes
ENSBTAG00000027795	GFM1	95	81.337	ENSORLG00020003362	gfm1	96	81.337	Oryzias_latipes_hni
ENSBTAG00000027795	GFM1	95	80.919	ENSORLG00015005829	gfm1	96	80.919	Oryzias_latipes_hsok
ENSBTAG00000027795	GFM1	95	82.033	ENSOMEG00000012894	gfm1	96	82.033	Oryzias_melastigma
ENSBTAG00000027795	GFM1	100	93.501	ENSOGAG00000008298	GFM1	100	93.501	Otolemur_garnettii
ENSBTAG00000027795	GFM1	96	97.937	ENSOARG00000002409	GFM1	100	97.937	Ovis_aries
ENSBTAG00000027795	GFM1	98	92.935	ENSPPAG00000033881	GFM1	100	92.440	Pan_paniscus
ENSBTAG00000027795	GFM1	98	95.399	ENSPPRG00000009281	GFM1	100	95.225	Panthera_pardus
ENSBTAG00000027795	GFM1	98	95.264	ENSPTIG00000012416	GFM1	100	95.093	Panthera_tigris_altaica
ENSBTAG00000027795	GFM1	98	92.935	ENSPTRG00000015570	GFM1	100	92.440	Pan_troglodytes
ENSBTAG00000027795	GFM1	100	92.042	ENSPANG00000016512	GFM1	100	92.042	Papio_anubis
ENSBTAG00000027795	GFM1	95	81.311	ENSPKIG00000004876	gfm1	96	81.311	Paramormyrops_kingsleyae
ENSBTAG00000027795	GFM1	99	82.124	ENSPSIG00000012567	GFM1	99	82.544	Pelodiscus_sinensis
ENSBTAG00000027795	GFM1	95	79.889	ENSPMGG00000014068	gfm1	99	79.889	Periophthalmus_magnuspinnatus
ENSBTAG00000027795	GFM1	100	93.758	ENSPEMG00000008942	Gfm1	100	93.758	Peromyscus_maniculatus_bairdii
ENSBTAG00000027795	GFM1	84	85.556	ENSPCIG00000020195	GFM1	97	85.556	Phascolarctos_cinereus
ENSBTAG00000027795	GFM1	95	82.591	ENSPFOG00000011022	gfm1	96	82.591	Poecilia_formosa
ENSBTAG00000027795	GFM1	95	82.312	ENSPLAG00000019585	gfm1	96	81.818	Poecilia_latipinna
ENSBTAG00000027795	GFM1	95	82.451	ENSPMEG00000012376	gfm1	96	82.451	Poecilia_mexicana
ENSBTAG00000027795	GFM1	95	82.033	ENSPREG00000001332	gfm1	91	82.033	Poecilia_reticulata
ENSBTAG00000027795	GFM1	98	92.935	ENSPPYG00000014244	GFM1	100	92.440	Pongo_abelii
ENSBTAG00000027795	GFM1	93	89.331	ENSPCAG00000008934	GFM1	100	89.331	Procavia_capensis
ENSBTAG00000027795	GFM1	98	94.701	ENSPCOG00000022259	GFM1	100	94.430	Propithecus_coquereli
ENSBTAG00000027795	GFM1	100	94.960	ENSPVAG00000013605	GFM1	100	94.960	Pteropus_vampyrus
ENSBTAG00000027795	GFM1	97	80.217	ENSPNYG00000006037	gfm1	100	80.217	Pundamilia_nyererei
ENSBTAG00000027795	GFM1	100	78.353	ENSPNAG00000001237	gfm1	97	80.641	Pygocentrus_nattereri
ENSBTAG00000027795	GFM1	100	92.829	ENSRNOG00000012873	Gfm1	100	92.829	Rattus_norvegicus
ENSBTAG00000027795	GFM1	98	92.527	ENSRBIG00000031363	GFM1	100	92.042	Rhinopithecus_bieti
ENSBTAG00000027795	GFM1	98	92.663	ENSRROG00000031081	GFM1	100	92.175	Rhinopithecus_roxellana
ENSBTAG00000027795	GFM1	92	56.916	YLR069C	-	90	56.916	Saccharomyces_cerevisiae
ENSBTAG00000027795	GFM1	100	92.573	ENSSBOG00000023252	GFM1	100	92.573	Saimiri_boliviensis_boliviensis
ENSBTAG00000027795	GFM1	98	87.755	ENSSHAG00000017772	GFM1	99	87.449	Sarcophilus_harrisii
ENSBTAG00000027795	GFM1	96	80.690	ENSSFOG00015003117	gfm1	99	80.690	Scleropages_formosus
ENSBTAG00000027795	GFM1	99	77.763	ENSSMAG00000013221	gfm1	96	79.387	Scophthalmus_maximus
ENSBTAG00000027795	GFM1	98	78.677	ENSSDUG00000018665	gfm1	96	80.223	Seriola_dumerili
ENSBTAG00000027795	GFM1	98	78.571	ENSSLDG00000020606	gfm1	96	80.223	Seriola_lalandi_dorsalis
ENSBTAG00000027795	GFM1	95	81.337	ENSSPUG00000018686	GFM1	97	81.337	Sphenodon_punctatus
ENSBTAG00000027795	GFM1	95	80.641	ENSSPAG00000008800	gfm1	96	80.641	Stegastes_partitus
ENSBTAG00000027795	GFM1	100	95.358	ENSSSCG00000025651	GFM1	100	95.358	Sus_scrofa
ENSBTAG00000027795	GFM1	95	80.501	ENSTRUG00000009244	gfm1	96	80.501	Takifugu_rubripes
ENSBTAG00000027795	GFM1	95	81.476	ENSTNIG00000007729	gfm1	96	81.476	Tetraodon_nigroviridis
ENSBTAG00000027795	GFM1	98	77.868	ENSTBEG00000017404	GFM1	100	78.042	Tupaia_belangeri
ENSBTAG00000027795	GFM1	100	95.244	ENSTTRG00000001735	GFM1	100	95.112	Tursiops_truncatus
ENSBTAG00000027795	GFM1	98	94.452	ENSUAMG00000026381	GFM1	100	94.430	Ursus_americanus
ENSBTAG00000027795	GFM1	98	94.317	ENSUMAG00000011268	GFM1	100	94.297	Ursus_maritimus
ENSBTAG00000027795	GFM1	100	92.032	ENSVPAG00000009444	GFM1	100	92.032	Vicugna_pacos
ENSBTAG00000027795	GFM1	99	92.267	ENSVVUG00000020091	GFM1	100	94.379	Vulpes_vulpes
ENSBTAG00000027795	GFM1	100	82.228	ENSXETG00000032551	GFM1	99	82.533	Xenopus_tropicalis
ENSBTAG00000027795	GFM1	51	80.879	ENSXCOG00000012590	gfm1	89	80.879	Xiphophorus_couchianus
ENSBTAG00000027795	GFM1	95	82.033	ENSXMAG00000000261	gfm1	96	82.033	Xiphophorus_maculatus