EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000030775 (Gene tree)
Gene ID: 613725
Gene Symbol: PCBP3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 229401 bases
Position: chr1:145395830-145625230
Accession: 53597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000067005	KH_1	PF00013.29	1.7e-55	1	3
ENSBTAP00000067005	KH_1	PF00013.29	1.7e-55	2	3
ENSBTAP00000067005	KH_1	PF00013.29	1.7e-55	3	3
ENSBTAP00000073825	KH_1	PF00013.29	1.7e-55	1	3
ENSBTAP00000073825	KH_1	PF00013.29	1.7e-55	2	3
ENSBTAP00000073825	KH_1	PF00013.29	1.7e-55	3	3
ENSBTAP00000041048	KH_1	PF00013.29	1.9e-55	1	3
ENSBTAP00000041048	KH_1	PF00013.29	1.9e-55	2	3
ENSBTAP00000041048	KH_1	PF00013.29	1.9e-55	3	3
ENSBTAP00000067253	KH_1	PF00013.29	1.3e-49	1	3
ENSBTAP00000067253	KH_1	PF00013.29	1.3e-49	2	3
ENSBTAP00000067253	KH_1	PF00013.29	1.3e-49	3	3
ENSBTAP00000041048	KH_2	PF07650.17	2e-15	1	1
ENSBTAP00000067005	KH_2	PF07650.17	3.6e-15	1	1
ENSBTAP00000073825	KH_2	PF07650.17	3.6e-15	1	1
ENSBTAP00000067253	KH_2	PF07650.17	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000074608	-	1947	-	ENSBTAP00000067005	351 (aa)	-	UPI000DBC7311
ENSBTAT00000084390	-	1068	-	ENSBTAP00000067253	355 (aa)	-	-
ENSBTAT00000043482	-	1086	-	ENSBTAP00000041048	361 (aa)	-	Q17QV0
ENSBTAT00000075987	-	1908	-	ENSBTAP00000073825	351 (aa)	-	UPI000DBC7311

Gene Model

Click here to download ENSBTAG00000030775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000030775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000030775	PCBP3	64	46.250	ENSBTAG00000008557	-	58	46.250
ENSBTAG00000030775	PCBP3	68	32.692	ENSBTAG00000008926	FUBP1	53	40.625
ENSBTAG00000030775	PCBP3	85	33.813	ENSBTAG00000019406	IGF2BP3	59	33.813
ENSBTAG00000030775	PCBP3	71	52.857	ENSBTAG00000021131	HNRNPK	61	52.857
ENSBTAG00000030775	PCBP3	86	33.582	ENSBTAG00000011736	IGF2BP1	59	33.582
ENSBTAG00000030775	PCBP3	99	41.270	ENSBTAG00000013072	FUBP3	65	41.270
ENSBTAG00000030775	PCBP3	99	73.333	ENSBTAG00000020757	PCBP2	99	78.012
ENSBTAG00000030775	PCBP3	85	42.254	ENSBTAG00000002170	NOVA1	64	40.351
ENSBTAG00000030775	PCBP3	95	56.560	ENSBTAG00000018622	PCBP4	92	60.714
ENSBTAG00000030775	PCBP3	98	37.313	ENSBTAG00000007666	IGF2BP2	66	36.567
ENSBTAG00000030775	PCBP3	70	35.938	ENSBTAG00000021018	KHSRP	53	35.938
ENSBTAG00000030775	PCBP3	94	67.771	ENSBTAG00000008985	PCBP1	98	67.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000030775	PCBP3	100	99.446	ENSG00000183570	PCBP3	100	99.446	Homo_sapiens
ENSBTAG00000030775	PCBP3	99	68.611	ENSAPOG00000023735	zgc:110045	99	76.161	Acanthochromis_polyacanthus
ENSBTAG00000030775	PCBP3	99	67.232	ENSACIG00000002577	zgc:110045	96	73.934	Amphilophus_citrinellus
ENSBTAG00000030775	PCBP3	71	78.723	ENSAOCG00000005266	zgc:110045	97	71.845	Amphiprion_ocellaris
ENSBTAG00000030775	PCBP3	97	68.857	ENSAPEG00000000729	zgc:110045	72	76.677	Amphiprion_percula
ENSBTAG00000030775	PCBP3	85	72.889	ENSATEG00000011191	zgc:110045	65	72.889	Anabas_testudineus
ENSBTAG00000030775	PCBP3	97	68.857	ENSACLG00000019285	zgc:110045	72	77.316	Astatotilapia_calliptera
ENSBTAG00000030775	PCBP3	100	93.801	ENSCAFG00000011907	PCBP3	100	93.801	Canis_familiaris
ENSBTAG00000030775	PCBP3	100	93.258	ENSCHIG00000015841	PCBP3	98	92.098	Capra_hircus
ENSBTAG00000030775	PCBP3	86	96.137	ENSTSYG00000005254	PCBP3	94	96.137	Carlito_syrichta
ENSBTAG00000030775	PCBP3	100	74.510	ENSCAPG00000006767	PCBP3	91	73.425	Cavia_aperea
ENSBTAG00000030775	PCBP3	100	93.370	ENSCPOG00000003648	PCBP3	100	91.914	Cavia_porcellus
ENSBTAG00000030775	PCBP3	100	97.151	ENSCCAG00000024561	PCBP3	100	97.151	Cebus_capucinus
ENSBTAG00000030775	PCBP3	100	96.866	ENSCATG00000038419	PCBP3	100	96.866	Cercocebus_atys
ENSBTAG00000030775	PCBP3	100	93.370	ENSCLAG00000006667	PCBP3	100	92.722	Chinchilla_lanigera
ENSBTAG00000030775	PCBP3	100	97.784	ENSCANG00000026757	PCBP3	100	97.784	Colobus_angolensis_palliatus
ENSBTAG00000030775	PCBP3	100	93.370	ENSCGRG00001006836	Pcbp3	100	92.453	Cricetulus_griseus_chok1gshd
ENSBTAG00000030775	PCBP3	100	93.370	ENSCGRG00000001837	Pcbp3	100	92.453	Cricetulus_griseus_crigri
ENSBTAG00000030775	PCBP3	91	75.542	ENSCSEG00000010020	zgc:110045	99	75.542	Cynoglossus_semilaevis
ENSBTAG00000030775	PCBP3	67	82.558	ENSCVAG00000004726	zgc:110045	89	74.112	Cyprinodon_variegatus
ENSBTAG00000030775	PCBP3	81	74.026	ENSDARG00000057141	zgc:110045	94	77.778	Danio_rerio
ENSBTAG00000030775	PCBP3	100	91.436	ENSDNOG00000049518	PCBP3	100	90.463	Dasypus_novemcinctus
ENSBTAG00000030775	PCBP3	89	92.653	ENSDORG00000003640	Pcbp3	99	92.653	Dipodomys_ordii
ENSBTAG00000030775	PCBP3	89	71.366	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSBTAG00000030775	PCBP3	100	98.006	ENSEASG00005007068	PCBP3	100	98.006	Equus_asinus_asinus
ENSBTAG00000030775	PCBP3	100	98.291	ENSECAG00000012413	PCBP3	100	98.291	Equus_caballus
ENSBTAG00000030775	PCBP3	97	67.614	ENSELUG00000019784	zgc:110045	76	83.889	Esox_lucius
ENSBTAG00000030775	PCBP3	100	98.860	ENSFCAG00000014812	PCBP3	100	98.860	Felis_catus
ENSBTAG00000030775	PCBP3	100	97.436	ENSFDAG00000009117	PCBP3	100	97.436	Fukomys_damarensis
ENSBTAG00000030775	PCBP3	97	65.341	ENSFHEG00000018838	-	92	73.632	Fundulus_heteroclitus
ENSBTAG00000030775	PCBP3	98	67.409	ENSGMOG00000005953	zgc:110045	98	73.089	Gadus_morhua
ENSBTAG00000030775	PCBP3	76	77.725	ENSGAFG00000017864	zgc:110045	93	77.725	Gambusia_affinis
ENSBTAG00000030775	PCBP3	99	68.421	ENSGACG00000003044	zgc:110045	99	75.926	Gasterosteus_aculeatus
ENSBTAG00000030775	PCBP3	100	96.866	ENSGGOG00000003683	PCBP3	100	96.866	Gorilla_gorilla
ENSBTAG00000030775	PCBP3	91	76.780	ENSHBUG00000012495	zgc:110045	99	76.780	Haplochromis_burtoni
ENSBTAG00000030775	PCBP3	100	92.818	ENSHGLG00000018620	PCBP3	99	92.120	Heterocephalus_glaber_female
ENSBTAG00000030775	PCBP3	100	92.818	ENSHGLG00100013590	PCBP3	99	92.120	Heterocephalus_glaber_male
ENSBTAG00000030775	PCBP3	99	61.957	ENSHCOG00000000818	zgc:110045	96	73.684	Hippocampus_comes
ENSBTAG00000030775	PCBP3	80	71.366	ENSIPUG00000003932	zgc:110045	81	72.018	Ictalurus_punctatus
ENSBTAG00000030775	PCBP3	100	93.370	ENSSTOG00000007178	PCBP3	100	92.183	Ictidomys_tridecemlineatus
ENSBTAG00000030775	PCBP3	100	93.094	ENSJJAG00000021192	Pcbp3	100	92.183	Jaculus_jaculus
ENSBTAG00000030775	PCBP3	75	85.227	ENSKMAG00000016179	-	86	85.227	Kryptolebias_marmoratus
ENSBTAG00000030775	PCBP3	99	67.403	ENSLBEG00000023074	zgc:110045	90	83.333	Labrus_bergylta
ENSBTAG00000030775	PCBP3	100	91.436	ENSLAFG00000020835	PCBP3	100	99.163	Loxodonta_africana
ENSBTAG00000030775	PCBP3	100	96.866	ENSMFAG00000034574	PCBP3	100	96.866	Macaca_fascicularis
ENSBTAG00000030775	PCBP3	100	96.866	ENSMMUG00000003825	PCBP3	100	96.866	Macaca_mulatta
ENSBTAG00000030775	PCBP3	100	96.866	ENSMNEG00000035551	PCBP3	100	99.687	Macaca_nemestrina
ENSBTAG00000030775	PCBP3	100	96.866	ENSMLEG00000038785	PCBP3	100	96.866	Mandrillus_leucophaeus
ENSBTAG00000030775	PCBP3	97	68.768	ENSMAMG00000014389	zgc:110045	99	76.603	Mastacembelus_armatus
ENSBTAG00000030775	PCBP3	97	68.857	ENSMZEG00005011785	zgc:110045	72	77.316	Maylandia_zebra
ENSBTAG00000030775	PCBP3	100	93.094	ENSMAUG00000007036	Pcbp3	100	92.453	Mesocricetus_auratus
ENSBTAG00000030775	PCBP3	100	97.151	ENSMICG00000012679	PCBP3	100	97.151	Microcebus_murinus
ENSBTAG00000030775	PCBP3	100	93.094	ENSMOCG00000016127	Pcbp3	100	92.183	Microtus_ochrogaster
ENSBTAG00000030775	PCBP3	75	83.333	ENSMMOG00000008399	zgc:110045	85	83.333	Mola_mola
ENSBTAG00000030775	PCBP3	78	78.919	ENSMALG00000008763	zgc:110045	92	78.919	Monopterus_albus
ENSBTAG00000030775	PCBP3	100	93.629	MGP_CAROLIEiJ_G0015475	Pcbp3	100	99.379	Mus_caroli
ENSBTAG00000030775	PCBP3	100	93.629	ENSMUSG00000001120	Pcbp3	99	99.379	Mus_musculus
ENSBTAG00000030775	PCBP3	100	99.448	MGP_PahariEiJ_G0030889	Pcbp3	100	99.379	Mus_pahari
ENSBTAG00000030775	PCBP3	100	99.448	MGP_SPRETEiJ_G0016288	Pcbp3	100	99.379	Mus_spretus
ENSBTAG00000030775	PCBP3	99	93.478	ENSMLUG00000003074	PCBP3	99	93.478	Myotis_lucifugus
ENSBTAG00000030775	PCBP3	100	93.094	ENSNGAG00000005416	Pcbp3	100	92.183	Nannospalax_galili
ENSBTAG00000030775	PCBP3	97	68.857	ENSNBRG00000017646	zgc:110045	72	77.316	Neolamprologus_brichardi
ENSBTAG00000030775	PCBP3	100	97.436	ENSNLEG00000002639	PCBP3	100	97.436	Nomascus_leucogenys
ENSBTAG00000030775	PCBP3	100	93.629	ENSMEUG00000012960	PCBP3	100	93.629	Notamacropus_eugenii
ENSBTAG00000030775	PCBP3	100	92.697	ENSODEG00000012873	PCBP3	100	90.515	Octodon_degus
ENSBTAG00000030775	PCBP3	97	69.143	ENSONIG00000010370	zgc:110045	76	77.316	Oreochromis_niloticus
ENSBTAG00000030775	PCBP3	94	97.482	ENSOANG00000006265	PCBP3	98	97.482	Ornithorhynchus_anatinus
ENSBTAG00000030775	PCBP3	97	68.571	ENSORLG00000014385	-	72	76.677	Oryzias_latipes
ENSBTAG00000030775	PCBP3	97	68.286	ENSORLG00020003139	zgc:110045	86	73.460	Oryzias_latipes_hni
ENSBTAG00000030775	PCBP3	97	68.571	ENSOMEG00000015459	-	72	76.358	Oryzias_melastigma
ENSBTAG00000030775	PCBP3	100	92.412	ENSOARG00000012704	PCBP3	100	92.412	Ovis_aries
ENSBTAG00000030775	PCBP3	100	96.866	ENSPPAG00000021940	PCBP3	100	96.866	Pan_paniscus
ENSBTAG00000030775	PCBP3	100	98.860	ENSPPRG00000003933	PCBP3	100	98.860	Panthera_pardus
ENSBTAG00000030775	PCBP3	100	83.333	ENSPTIG00000012038	PCBP3	100	84.330	Panthera_tigris_altaica
ENSBTAG00000030775	PCBP3	100	78.056	ENSPTRG00000014010	PCBP3	100	77.778	Pan_troglodytes
ENSBTAG00000030775	PCBP3	100	96.866	ENSPANG00000023631	PCBP3	100	96.866	Papio_anubis
ENSBTAG00000030775	PCBP3	97	60.694	ENSPMGG00000021588	-	72	65.217	Periophthalmus_magnuspinnatus
ENSBTAG00000030775	PCBP3	81	68.182	ENSPMGG00000022531	-	92	74.627	Periophthalmus_magnuspinnatus
ENSBTAG00000030775	PCBP3	100	93.370	ENSPEMG00000000587	Pcbp3	100	92.453	Peromyscus_maniculatus_bairdii
ENSBTAG00000030775	PCBP3	98	68.169	ENSPFOG00000002348	zgc:110045	98	76.101	Poecilia_formosa
ENSBTAG00000030775	PCBP3	80	70.136	ENSPLAG00000017488	zgc:110045	93	73.934	Poecilia_latipinna
ENSBTAG00000030775	PCBP3	96	66.762	ENSPMEG00000012762	zgc:110045	93	77.725	Poecilia_mexicana
ENSBTAG00000030775	PCBP3	96	69.275	ENSPREG00000001797	zgc:110045	94	77.358	Poecilia_reticulata
ENSBTAG00000030775	PCBP3	91	89.247	ENSPPYG00000011525	-	94	89.844	Pongo_abelii
ENSBTAG00000030775	PCBP3	97	82.235	ENSPCAG00000001454	PCBP3	100	82.235	Procavia_capensis
ENSBTAG00000030775	PCBP3	100	97.436	ENSPCOG00000013797	PCBP3	100	97.436	Propithecus_coquereli
ENSBTAG00000030775	PCBP3	86	99.565	ENSPVAG00000000832	PCBP3	83	99.565	Pteropus_vampyrus
ENSBTAG00000030775	PCBP3	90	68.559	ENSPNYG00000004637	zgc:110045	96	74.408	Pundamilia_nyererei
ENSBTAG00000030775	PCBP3	85	74.026	ENSPNAG00000004501	zgc:110045	94	78.673	Pygocentrus_nattereri
ENSBTAG00000030775	PCBP3	100	96.866	ENSRROG00000034567	PCBP3	100	96.866	Rhinopithecus_roxellana
ENSBTAG00000030775	PCBP3	100	96.866	ENSSBOG00000005789	PCBP3	100	96.866	Saimiri_boliviensis_boliviensis
ENSBTAG00000030775	PCBP3	97	68.857	ENSSMAG00000013541	zgc:110045	91	76.389	Scophthalmus_maximus
ENSBTAG00000030775	PCBP3	80	75.439	ENSSDUG00000019371	zgc:110045	66	75.439	Seriola_dumerili
ENSBTAG00000030775	PCBP3	97	68.857	ENSSLDG00000021064	zgc:110045	72	76.997	Seriola_lalandi_dorsalis
ENSBTAG00000030775	PCBP3	70	100.000	ENSSARG00000007629	-	80	100.000	Sorex_araneus
ENSBTAG00000030775	PCBP3	99	68.889	ENSSPAG00000000563	zgc:110045	99	76.471	Stegastes_partitus
ENSBTAG00000030775	PCBP3	100	98.291	ENSSSCG00000023041	PCBP3	100	98.291	Sus_scrofa
ENSBTAG00000030775	PCBP3	78	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSBTAG00000030775	PCBP3	73	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSBTAG00000030775	PCBP3	66	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSBTAG00000030775	PCBP3	100	95.493	ENSUAMG00000006491	PCBP3	100	100.000	Ursus_americanus
ENSBTAG00000030775	PCBP3	100	84.123	ENSUMAG00000025403	PCBP3	100	81.600	Ursus_maritimus
ENSBTAG00000030775	PCBP3	100	88.920	ENSVVUG00000023862	PCBP3	100	88.920	Vulpes_vulpes
ENSBTAG00000030775	PCBP3	63	83.333	ENSXCOG00000005968	zgc:110045	82	83.333	Xiphophorus_couchianus
ENSBTAG00000030775	PCBP3	96	68.986	ENSXMAG00000008030	zgc:110045	72	76.358	Xiphophorus_maculatus