EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000031917 (Gene tree)
Gene ID: 100298738
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 193208 bases
Position: chr9:91412046-91605253
Accession: 52823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000042661	RRM_1	PF00076.22	2.1e-09	1	1
ENSBTAP00000069192	RRM_1	PF00076.22	2.1e-09	1	1
ENSBTAP00000072925	RRM_1	PF00076.22	2.1e-09	1	1
ENSBTAP00000060963	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000045257	-	4731	-	ENSBTAP00000042661	1264 (aa)	XP_010807010	F1MYK6
ENSBTAT00000069259	-	5122	-	ENSBTAP00000072925	1264 (aa)	XP_010807010	UPI00005BD556
ENSBTAT00000068799	-	5570	-	ENSBTAP00000069192	1264 (aa)	XP_010807010	UPI00005BD556
ENSBTAT00000074669	-	5506	XM_002690355	ENSBTAP00000060963	1268 (aa)	XP_002690401	UPI00023AD9B3

Gene Model

Click here to download ENSBTAG00000031917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000031917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000031917	SCAF8	100	95.279	ENSG00000213079	SCAF8	100	95.279	Homo_sapiens
ENSBTAG00000031917	SCAF8	87	69.351	ENSAPOG00000015527	SCAF8	77	68.870	Acanthochromis_polyacanthus
ENSBTAG00000031917	SCAF8	100	95.814	ENSAMEG00000007583	SCAF8	97	94.191	Ailuropoda_melanoleuca
ENSBTAG00000031917	SCAF8	87	69.231	ENSAOCG00000002421	SCAF8	76	68.750	Amphiprion_ocellaris
ENSBTAG00000031917	SCAF8	90	66.346	ENSATEG00000006959	SCAF8	98	65.584	Anabas_testudineus
ENSBTAG00000031917	SCAF8	100	78.800	ENSAPLG00000005765	SCAF8	100	78.800	Anas_platyrhynchos
ENSBTAG00000031917	SCAF8	99	74.351	ENSACAG00000005282	SCAF8	99	74.194	Anolis_carolinensis
ENSBTAG00000031917	SCAF8	100	94.650	ENSANAG00000036184	SCAF8	100	94.650	Aotus_nancymaae
ENSBTAG00000031917	SCAF8	87	68.750	ENSACLG00000018828	SCAF8	80	68.149	Astatotilapia_calliptera
ENSBTAG00000031917	SCAF8	55	40.839	ENSACLG00000024833	scaf4b	52	60.302	Astatotilapia_calliptera
ENSBTAG00000031917	SCAF8	100	94.729	ENSCJAG00000012631	SCAF8	97	93.189	Callithrix_jacchus
ENSBTAG00000031917	SCAF8	100	96.212	ENSCAFG00000000570	SCAF8	100	96.212	Canis_familiaris
ENSBTAG00000031917	SCAF8	99	96.193	ENSCAFG00020015048	SCAF8	99	96.051	Canis_lupus_dingo
ENSBTAG00000031917	SCAF8	100	98.896	ENSCHIG00000025041	SCAF8	100	98.896	Capra_hircus
ENSBTAG00000031917	SCAF8	100	94.238	ENSTSYG00000010991	SCAF8	97	94.238	Carlito_syrichta
ENSBTAG00000031917	SCAF8	65	96.552	ENSCAPG00000003300	SCAF8	88	96.491	Cavia_aperea
ENSBTAG00000031917	SCAF8	99	86.245	ENSCPOG00000022216	-	99	85.455	Cavia_porcellus
ENSBTAG00000031917	SCAF8	100	94.571	ENSCCAG00000024952	SCAF8	100	94.571	Cebus_capucinus
ENSBTAG00000031917	SCAF8	100	95.201	ENSCATG00000035361	SCAF8	100	95.201	Cercocebus_atys
ENSBTAG00000031917	SCAF8	100	93.307	ENSCLAG00000004910	SCAF8	100	93.810	Chinchilla_lanigera
ENSBTAG00000031917	SCAF8	100	95.185	ENSCSAG00000013430	SCAF8	100	93.653	Chlorocebus_sabaeus
ENSBTAG00000031917	SCAF8	100	76.103	ENSCPBG00000016330	SCAF8	100	82.713	Chrysemys_picta_bellii
ENSBTAG00000031917	SCAF8	100	94.886	ENSCANG00000039499	SCAF8	99	94.845	Colobus_angolensis_palliatus
ENSBTAG00000031917	SCAF8	100	91.102	ENSCGRG00001020167	Scaf8	100	91.102	Cricetulus_griseus_chok1gshd
ENSBTAG00000031917	SCAF8	99	91.032	ENSCGRG00000004120	Scaf8	99	91.032	Cricetulus_griseus_crigri
ENSBTAG00000031917	SCAF8	87	66.747	ENSCSEG00000000043	-	78	67.831	Cynoglossus_semilaevis
ENSBTAG00000031917	SCAF8	89	67.059	ENSCVAG00000000925	SCAF8	77	66.405	Cyprinodon_variegatus
ENSBTAG00000031917	SCAF8	96	88.670	ENSDNOG00000025271	SCAF8	100	92.282	Dasypus_novemcinctus
ENSBTAG00000031917	SCAF8	99	92.326	ENSDORG00000006391	Scaf8	100	92.192	Dipodomys_ordii
ENSBTAG00000031917	SCAF8	100	95.972	ENSEASG00005018879	SCAF8	100	96.145	Equus_asinus_asinus
ENSBTAG00000031917	SCAF8	100	96.063	ENSECAG00000005540	SCAF8	100	96.299	Equus_caballus
ENSBTAG00000031917	SCAF8	86	67.966	ENSELUG00000002779	SCAF8	75	67.275	Esox_lucius
ENSBTAG00000031917	SCAF8	100	96.220	ENSFCAG00000023424	SCAF8	100	96.220	Felis_catus
ENSBTAG00000031917	SCAF8	100	78.738	ENSFALG00000012433	SCAF8	100	78.911	Ficedula_albicollis
ENSBTAG00000031917	SCAF8	100	92.740	ENSFDAG00000010335	SCAF8	99	93.661	Fukomys_damarensis
ENSBTAG00000031917	SCAF8	93	69.136	ENSFHEG00000008284	SCAF8	77	68.642	Fundulus_heteroclitus
ENSBTAG00000031917	SCAF8	80	56.534	ENSGMOG00000018812	SCAF8	62	74.784	Gadus_morhua
ENSBTAG00000031917	SCAF8	99	79.672	ENSGALG00000013635	SCAF8	99	78.972	Gallus_gallus
ENSBTAG00000031917	SCAF8	50	58.974	ENSGAFG00000018033	SCAF8	78	65.239	Gambusia_affinis
ENSBTAG00000031917	SCAF8	93	53.846	ENSGACG00000006909	SCAF8	100	54.828	Gasterosteus_aculeatus
ENSBTAG00000031917	SCAF8	63	72.750	ENSGAGG00000017820	-	88	72.750	Gopherus_agassizii
ENSBTAG00000031917	SCAF8	100	95.358	ENSGGOG00000008645	SCAF8	100	95.358	Gorilla_gorilla
ENSBTAG00000031917	SCAF8	87	68.630	ENSHBUG00000019537	SCAF8	80	68.029	Haplochromis_burtoni
ENSBTAG00000031917	SCAF8	100	93.475	ENSHGLG00000003619	SCAF8	100	93.475	Heterocephalus_glaber_female
ENSBTAG00000031917	SCAF8	100	92.846	ENSHGLG00100004708	SCAF8	100	93.423	Heterocephalus_glaber_male
ENSBTAG00000031917	SCAF8	100	94.401	ENSSTOG00000026043	SCAF8	100	94.401	Ictidomys_tridecemlineatus
ENSBTAG00000031917	SCAF8	100	91.654	ENSJJAG00000020480	Scaf8	100	91.654	Jaculus_jaculus
ENSBTAG00000031917	SCAF8	87	68.712	ENSKMAG00000012767	SCAF8	78	68.231	Kryptolebias_marmoratus
ENSBTAG00000031917	SCAF8	63	77.037	ENSLBEG00000012484	-	59	77.143	Labrus_bergylta
ENSBTAG00000031917	SCAF8	100	61.659	ENSLOCG00000016856	SCAF8	100	60.876	Lepisosteus_oculatus
ENSBTAG00000031917	SCAF8	100	92.930	ENSLAFG00000000022	SCAF8	100	93.480	Loxodonta_africana
ENSBTAG00000031917	SCAF8	100	95.201	ENSMFAG00000032738	SCAF8	100	95.201	Macaca_fascicularis
ENSBTAG00000031917	SCAF8	100	95.201	ENSMMUG00000015163	SCAF8	100	95.201	Macaca_mulatta
ENSBTAG00000031917	SCAF8	100	95.201	ENSMNEG00000043466	SCAF8	100	95.201	Macaca_nemestrina
ENSBTAG00000031917	SCAF8	100	95.185	ENSMLEG00000034845	SCAF8	99	95.185	Mandrillus_leucophaeus
ENSBTAG00000031917	SCAF8	84	66.115	ENSMAMG00000009457	SCAF8	76	65.096	Mastacembelus_armatus
ENSBTAG00000031917	SCAF8	87	68.630	ENSMZEG00005005698	SCAF8	80	68.029	Maylandia_zebra
ENSBTAG00000031917	SCAF8	99	78.621	ENSMGAG00000012762	SCAF8	100	79.082	Meleagris_gallopavo
ENSBTAG00000031917	SCAF8	99	90.714	ENSMAUG00000009513	Scaf8	100	90.714	Mesocricetus_auratus
ENSBTAG00000031917	SCAF8	100	94.418	ENSMICG00000028965	SCAF8	100	94.261	Microcebus_murinus
ENSBTAG00000031917	SCAF8	100	91.811	ENSMOCG00000014950	Scaf8	100	91.811	Microtus_ochrogaster
ENSBTAG00000031917	SCAF8	86	64.400	ENSMMOG00000002216	SCAF8	78	63.288	Mola_mola
ENSBTAG00000031917	SCAF8	100	86.356	ENSMODG00000008301	SCAF8	100	86.356	Monodelphis_domestica
ENSBTAG00000031917	SCAF8	87	68.106	ENSMALG00000011584	SCAF8	78	67.784	Monopterus_albus
ENSBTAG00000031917	SCAF8	100	90.701	MGP_CAROLIEiJ_G0021016	Scaf8	100	90.701	Mus_caroli
ENSBTAG00000031917	SCAF8	100	91.095	ENSMUSG00000046201	Scaf8	100	91.095	Mus_musculus
ENSBTAG00000031917	SCAF8	100	91.411	MGP_PahariEiJ_G0023334	Scaf8	100	91.411	Mus_pahari
ENSBTAG00000031917	SCAF8	100	95.419	ENSMPUG00000001974	SCAF8	100	93.881	Mustela_putorius_furo
ENSBTAG00000031917	SCAF8	100	93.071	ENSMLUG00000029190	SCAF8	100	93.071	Myotis_lucifugus
ENSBTAG00000031917	SCAF8	100	91.969	ENSNGAG00000012332	Scaf8	100	91.969	Nannospalax_galili
ENSBTAG00000031917	SCAF8	95	64.447	ENSNBRG00000009067	SCAF8	100	63.853	Neolamprologus_brichardi
ENSBTAG00000031917	SCAF8	100	93.956	ENSNLEG00000015509	SCAF8	99	93.908	Nomascus_leucogenys
ENSBTAG00000031917	SCAF8	70	91.420	ENSOPRG00000018413	-	76	91.919	Ochotona_princeps
ENSBTAG00000031917	SCAF8	100	93.323	ENSODEG00000007296	SCAF8	100	93.323	Octodon_degus
ENSBTAG00000031917	SCAF8	100	55.873	ENSONIG00000008119	SCAF8	99	55.263	Oreochromis_niloticus
ENSBTAG00000031917	SCAF8	100	95.110	ENSOCUG00000026063	SCAF8	100	95.110	Oryctolagus_cuniculus
ENSBTAG00000031917	SCAF8	86	68.919	ENSORLG00000017358	SCAF8	78	68.796	Oryzias_latipes
ENSBTAG00000031917	SCAF8	86	69.042	ENSORLG00020002214	SCAF8	78	68.919	Oryzias_latipes_hni
ENSBTAG00000031917	SCAF8	86	69.165	ENSORLG00015015779	SCAF8	78	69.042	Oryzias_latipes_hsok
ENSBTAG00000031917	SCAF8	86	69.410	ENSOMEG00000015471	SCAF8	77	69.287	Oryzias_melastigma
ENSBTAG00000031917	SCAF8	100	94.238	ENSOGAG00000034223	SCAF8	97	92.724	Otolemur_garnettii
ENSBTAG00000031917	SCAF8	99	99.046	ENSOARG00000004159	SCAF8	100	98.967	Ovis_aries
ENSBTAG00000031917	SCAF8	100	95.122	ENSPPAG00000039826	SCAF8	100	95.122	Pan_paniscus
ENSBTAG00000031917	SCAF8	100	96.378	ENSPPRG00000023175	SCAF8	100	96.378	Panthera_pardus
ENSBTAG00000031917	SCAF8	99	96.276	ENSPTIG00000014836	SCAF8	100	96.276	Panthera_tigris_altaica
ENSBTAG00000031917	SCAF8	100	95.122	ENSPTRG00000018727	SCAF8	100	95.122	Pan_troglodytes
ENSBTAG00000031917	SCAF8	100	95.201	ENSPANG00000017489	SCAF8	100	93.528	Papio_anubis
ENSBTAG00000031917	SCAF8	100	57.207	ENSPKIG00000021212	SCAF8	100	57.208	Paramormyrops_kingsleyae
ENSBTAG00000031917	SCAF8	89	74.632	ENSPSIG00000008614	SCAF8	95	77.354	Pelodiscus_sinensis
ENSBTAG00000031917	SCAF8	99	91.190	ENSPEMG00000010531	Scaf8	100	91.190	Peromyscus_maniculatus_bairdii
ENSBTAG00000031917	SCAF8	100	87.343	ENSPCIG00000001141	SCAF8	100	87.343	Phascolarctos_cinereus
ENSBTAG00000031917	SCAF8	86	69.410	ENSPFOG00000004176	SCAF8	100	54.642	Poecilia_formosa
ENSBTAG00000031917	SCAF8	86	69.287	ENSPLAG00000021432	SCAF8	77	68.673	Poecilia_latipinna
ENSBTAG00000031917	SCAF8	86	69.533	ENSPMEG00000007591	SCAF8	84	68.380	Poecilia_mexicana
ENSBTAG00000031917	SCAF8	86	69.165	ENSPREG00000000652	SCAF8	77	68.550	Poecilia_reticulata
ENSBTAG00000031917	SCAF8	100	93.873	ENSPPYG00000017121	SCAF8	100	93.559	Pongo_abelii
ENSBTAG00000031917	SCAF8	85	97.655	ENSPCAG00000013044	SCAF8	90	97.655	Procavia_capensis
ENSBTAG00000031917	SCAF8	100	95.047	ENSPCOG00000002067	SCAF8	99	94.849	Propithecus_coquereli
ENSBTAG00000031917	SCAF8	99	91.527	ENSPVAG00000005582	SCAF8	100	92.566	Pteropus_vampyrus
ENSBTAG00000031917	SCAF8	87	68.750	ENSPNYG00000007277	SCAF8	80	68.149	Pundamilia_nyererei
ENSBTAG00000031917	SCAF8	87	68.281	ENSPNAG00000024740	SCAF8	82	68.523	Pygocentrus_nattereri
ENSBTAG00000031917	SCAF8	100	90.859	ENSRNOG00000016919	Scaf8	100	90.859	Rattus_norvegicus
ENSBTAG00000031917	SCAF8	100	94.965	ENSRBIG00000035769	SCAF8	100	94.965	Rhinopithecus_bieti
ENSBTAG00000031917	SCAF8	100	95.043	ENSRROG00000013580	SCAF8	100	95.043	Rhinopithecus_roxellana
ENSBTAG00000031917	SCAF8	100	94.650	ENSSBOG00000027023	SCAF8	100	94.650	Saimiri_boliviensis_boliviensis
ENSBTAG00000031917	SCAF8	100	86.410	ENSSHAG00000009915	SCAF8	100	86.410	Sarcophilus_harrisii
ENSBTAG00000031917	SCAF8	100	55.692	ENSSFOG00015009481	SCAF8	100	52.628	Scleropages_formosus
ENSBTAG00000031917	SCAF8	87	68.345	ENSSMAG00000008275	SCAF8	77	67.626	Scophthalmus_maximus
ENSBTAG00000031917	SCAF8	100	77.509	ENSSPUG00000015219	SCAF8	100	77.585	Sphenodon_punctatus
ENSBTAG00000031917	SCAF8	100	96.457	ENSSSCG00000004070	SCAF8	100	96.457	Sus_scrofa
ENSBTAG00000031917	SCAF8	99	80.173	ENSTGUG00000011151	SCAF8	100	80.346	Taeniopygia_guttata
ENSBTAG00000031917	SCAF8	86	67.897	ENSTRUG00000009243	SCAF8	78	67.651	Takifugu_rubripes
ENSBTAG00000031917	SCAF8	87	65.860	ENSTNIG00000016885	SCAF8	99	65.860	Tetraodon_nigroviridis
ENSBTAG00000031917	SCAF8	99	96.032	ENSTTRG00000014538	SCAF8	100	96.032	Tursiops_truncatus
ENSBTAG00000031917	SCAF8	100	95.591	ENSUAMG00000024736	SCAF8	99	95.556	Ursus_americanus
ENSBTAG00000031917	SCAF8	98	95.582	ENSUMAG00000013404	SCAF8	100	95.582	Ursus_maritimus
ENSBTAG00000031917	SCAF8	68	85.349	ENSVPAG00000012465	SCAF8	99	84.988	Vicugna_pacos
ENSBTAG00000031917	SCAF8	100	96.130	ENSVVUG00000007532	SCAF8	100	96.130	Vulpes_vulpes
ENSBTAG00000031917	SCAF8	100	61.120	ENSXETG00000013132	scaf8	100	61.215	Xenopus_tropicalis
ENSBTAG00000031917	SCAF8	86	69.287	ENSXMAG00000019192	SCAF8	78	68.673	Xiphophorus_maculatus