EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000033413 (Gene tree)
Gene ID: 534331
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 33858 bases
Position: chr28:25177661-25211518
Accession: 27973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000069799	GUCT	PF08152.12	1.9e-28	1	1
ENSBTAP00000022002	GUCT	PF08152.12	2.1e-28	1	1
ENSBTAP00000069799	ResIII	PF04851.15	3.7e-10	1	1
ENSBTAP00000022002	ResIII	PF04851.15	4.4e-10	1	1
ENSBTAP00000069799	DEAD	PF00270.29	2.2e-47	1	1
ENSBTAP00000022002	DEAD	PF00270.29	2.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000022002	-	3187	-	ENSBTAP00000022002	737 (aa)	-	F1MMK3
ENSBTAT00000077187	-	3025	-	ENSBTAP00000069799	683 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000033413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000033413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000033413	DDX50	55	32.212	ENSBTAG00000019608	DDX47	85	32.212
ENSBTAG00000033413	DDX50	55	33.099	ENSBTAG00000006671	DDX27	52	32.864
ENSBTAG00000033413	DDX50	50	31.536	ENSBTAG00000014724	EIF4A2	90	31.014
ENSBTAG00000033413	DDX50	50	32.888	ENSBTAG00000016023	EIF4A3	86	32.888
ENSBTAG00000033413	DDX50	85	64.434	ENSBTAG00000014558	DDX21	94	55.935
ENSBTAG00000033413	DDX50	50	32.533	ENSBTAG00000000132	EIF4A1	88	32.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000033413	DDX50	100	97.422	ENSG00000107625	DDX50	100	97.422	Homo_sapiens
ENSBTAG00000033413	DDX50	100	97.019	ENSAMEG00000017992	DDX50	100	97.019	Ailuropoda_melanoleuca
ENSBTAG00000033413	DDX50	92	77.569	ENSANAG00000017785	-	100	78.933	Aotus_nancymaae
ENSBTAG00000033413	DDX50	100	97.558	ENSCJAG00000018844	DDX50	100	97.558	Callithrix_jacchus
ENSBTAG00000033413	DDX50	100	97.561	ENSCAFG00000013776	DDX50	100	97.561	Canis_familiaris
ENSBTAG00000033413	DDX50	100	97.561	ENSCAFG00020025977	DDX50	99	97.561	Canis_lupus_dingo
ENSBTAG00000033413	DDX50	100	98.372	ENSCHIG00000000285	DDX50	99	98.372	Capra_hircus
ENSBTAG00000033413	DDX50	100	97.015	ENSTSYG00000004192	DDX50	99	98.396	Carlito_syrichta
ENSBTAG00000033413	DDX50	88	78.793	ENSCAPG00000007230	-	97	79.831	Cavia_aperea
ENSBTAG00000033413	DDX50	100	95.929	ENSCPOG00000002131	-	100	95.929	Cavia_porcellus
ENSBTAG00000033413	DDX50	80	96.774	ENSCCAG00000030543	DDX50	100	88.095	Cebus_capucinus
ENSBTAG00000033413	DDX50	98	71.745	ENSCATG00000035153	-	90	89.783	Cercocebus_atys
ENSBTAG00000033413	DDX50	99	95.109	ENSCATG00000032463	DDX50	99	95.109	Cercocebus_atys
ENSBTAG00000033413	DDX50	91	67.350	ENSCATG00000039259	-	90	67.737	Cercocebus_atys
ENSBTAG00000033413	DDX50	100	97.151	ENSCLAG00000012957	-	100	97.151	Chinchilla_lanigera
ENSBTAG00000033413	DDX50	50	86.992	ENSCLAG00000001553	-	95	86.992	Chinchilla_lanigera
ENSBTAG00000033413	DDX50	97	70.787	ENSCLAG00000001938	-	91	71.689	Chinchilla_lanigera
ENSBTAG00000033413	DDX50	100	97.558	ENSCSAG00000007703	DDX50	100	97.558	Chlorocebus_sabaeus
ENSBTAG00000033413	DDX50	88	94.915	ENSCHOG00000000233	DDX50	98	94.946	Choloepus_hoffmanni
ENSBTAG00000033413	DDX50	96	68.811	ENSCANG00000028077	-	92	68.268	Colobus_angolensis_palliatus
ENSBTAG00000033413	DDX50	86	71.767	ENSCANG00000018820	-	89	72.712	Colobus_angolensis_palliatus
ENSBTAG00000033413	DDX50	100	83.989	ENSCANG00000036450	-	100	83.989	Colobus_angolensis_palliatus
ENSBTAG00000033413	DDX50	92	95.870	ENSCGRG00001020223	Ddx50	100	95.387	Cricetulus_griseus_chok1gshd
ENSBTAG00000033413	DDX50	92	96.000	ENSCGRG00000015884	Ddx50	100	95.115	Cricetulus_griseus_crigri
ENSBTAG00000033413	DDX50	88	89.660	ENSDNOG00000001675	DDX50	100	89.660	Dasypus_novemcinctus
ENSBTAG00000033413	DDX50	100	96.201	ENSDORG00000007310	Ddx50	100	96.201	Dipodomys_ordii
ENSBTAG00000033413	DDX50	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSBTAG00000033413	DDX50	100	97.151	ENSEASG00005015595	DDX50	99	97.151	Equus_asinus_asinus
ENSBTAG00000033413	DDX50	100	97.286	ENSECAG00000023044	DDX50	99	97.286	Equus_caballus
ENSBTAG00000033413	DDX50	88	96.552	ENSEEUG00000005782	DDX50	89	96.552	Erinaceus_europaeus
ENSBTAG00000033413	DDX50	100	97.832	ENSFCAG00000012678	DDX50	99	97.832	Felis_catus
ENSBTAG00000033413	DDX50	92	89.381	ENSFDAG00000016109	-	100	89.824	Fukomys_damarensis
ENSBTAG00000033413	DDX50	52	71.094	ENSGGOG00000022568	-	92	79.027	Gorilla_gorilla
ENSBTAG00000033413	DDX50	100	97.422	ENSGGOG00000010100	DDX50	99	98.930	Gorilla_gorilla
ENSBTAG00000033413	DDX50	51	82.275	ENSGGOG00000041063	-	83	85.449	Gorilla_gorilla
ENSBTAG00000033413	DDX50	92	95.280	ENSHGLG00000013466	DDX50	100	95.115	Heterocephalus_glaber_female
ENSBTAG00000033413	DDX50	82	88.830	ENSHGLG00100006568	-	93	89.062	Heterocephalus_glaber_male
ENSBTAG00000033413	DDX50	92	95.280	ENSHGLG00100017191	DDX50	100	95.115	Heterocephalus_glaber_male
ENSBTAG00000033413	DDX50	100	94.851	ENSSTOG00000021852	-	100	94.580	Ictidomys_tridecemlineatus
ENSBTAG00000033413	DDX50	100	94.030	ENSJJAG00000023928	-	100	94.030	Jaculus_jaculus
ENSBTAG00000033413	DDX50	100	72.605	ENSJJAG00000019626	-	91	73.383	Jaculus_jaculus
ENSBTAG00000033413	DDX50	100	96.744	ENSLAFG00000006186	DDX50	100	96.744	Loxodonta_africana
ENSBTAG00000033413	DDX50	98	71.468	ENSMFAG00000045339	-	90	88.854	Macaca_fascicularis
ENSBTAG00000033413	DDX50	100	97.558	ENSMFAG00000044067	DDX50	100	97.558	Macaca_fascicularis
ENSBTAG00000033413	DDX50	80	68.136	ENSMMUG00000045343	-	81	67.845	Macaca_mulatta
ENSBTAG00000033413	DDX50	100	97.558	ENSMMUG00000001006	DDX50	100	97.917	Macaca_mulatta
ENSBTAG00000033413	DDX50	92	90.855	ENSMNEG00000031664	DDX50	100	91.180	Macaca_nemestrina
ENSBTAG00000033413	DDX50	98	72.690	ENSMNEG00000045530	-	92	88.485	Macaca_nemestrina
ENSBTAG00000033413	DDX50	100	95.658	ENSMLEG00000037313	DDX50	100	95.658	Mandrillus_leucophaeus
ENSBTAG00000033413	DDX50	86	83.879	ENSMLEG00000041988	-	90	87.468	Mandrillus_leucophaeus
ENSBTAG00000033413	DDX50	60	93.947	ENSMAUG00000022192	Ddx50	100	93.947	Mesocricetus_auratus
ENSBTAG00000033413	DDX50	100	89.688	ENSMICG00000017539	DDX50	100	89.688	Microcebus_murinus
ENSBTAG00000033413	DDX50	92	95.441	ENSMOCG00000001676	Ddx50	100	94.587	Microtus_ochrogaster
ENSBTAG00000033413	DDX50	92	80.205	ENSMODG00000010741	DDX50	92	81.132	Monodelphis_domestica
ENSBTAG00000033413	DDX50	92	93.953	MGP_CAROLIEiJ_G0015389	Ddx50	100	94.980	Mus_caroli
ENSBTAG00000033413	DDX50	92	94.838	ENSMUSG00000020076	Ddx50	100	95.251	Mus_musculus
ENSBTAG00000033413	DDX50	92	94.985	MGP_PahariEiJ_G0030805	Ddx50	100	95.387	Mus_pahari
ENSBTAG00000033413	DDX50	92	94.838	MGP_SPRETEiJ_G0016200	Ddx50	100	95.251	Mus_spretus
ENSBTAG00000033413	DDX50	88	97.377	ENSMPUG00000004589	DDX50	99	97.377	Mustela_putorius_furo
ENSBTAG00000033413	DDX50	92	95.723	ENSMLUG00000017590	DDX50	100	95.387	Myotis_lucifugus
ENSBTAG00000033413	DDX50	100	95.794	ENSNGAG00000004283	Ddx50	100	95.794	Nannospalax_galili
ENSBTAG00000033413	DDX50	100	97.422	ENSNLEG00000011631	DDX50	100	97.422	Nomascus_leucogenys
ENSBTAG00000033413	DDX50	88	67.634	ENSNLEG00000035506	-	89	78.462	Nomascus_leucogenys
ENSBTAG00000033413	DDX50	92	93.510	ENSOPRG00000001619	DDX50	93	94.282	Ochotona_princeps
ENSBTAG00000033413	DDX50	100	96.201	ENSODEG00000014597	-	100	96.201	Octodon_degus
ENSBTAG00000033413	DDX50	93	67.335	ENSOANG00000004776	DDX50	76	71.572	Ornithorhynchus_anatinus
ENSBTAG00000033413	DDX50	95	93.687	ENSOCUG00000002879	DDX50	95	95.147	Oryctolagus_cuniculus
ENSBTAG00000033413	DDX50	100	96.879	ENSOGAG00000001844	DDX50	100	96.879	Otolemur_garnettii
ENSBTAG00000033413	DDX50	100	98.372	ENSOARG00000005264	DDX50	99	98.372	Ovis_aries
ENSBTAG00000033413	DDX50	100	97.286	ENSPPAG00000040723	DDX50	100	97.286	Pan_paniscus
ENSBTAG00000033413	DDX50	52	71.053	ENSPPAG00000026788	-	91	79.077	Pan_paniscus
ENSBTAG00000033413	DDX50	100	97.832	ENSPPRG00000015826	DDX50	100	97.832	Panthera_pardus
ENSBTAG00000033413	DDX50	100	97.832	ENSPTIG00000008454	DDX50	100	97.832	Panthera_tigris_altaica
ENSBTAG00000033413	DDX50	52	71.053	ENSPTRG00000044913	-	99	72.368	Pan_troglodytes
ENSBTAG00000033413	DDX50	100	97.286	ENSPTRG00000002562	DDX50	100	97.286	Pan_troglodytes
ENSBTAG00000033413	DDX50	92	89.971	ENSPANG00000022143	-	100	90.366	Papio_anubis
ENSBTAG00000033413	DDX50	92	94.838	ENSPEMG00000020899	-	100	93.351	Peromyscus_maniculatus_bairdii
ENSBTAG00000033413	DDX50	92	80.294	ENSPCIG00000016036	DDX50	95	80.321	Phascolarctos_cinereus
ENSBTAG00000033413	DDX50	91	97.768	ENSPPYG00000002390	DDX50	100	97.768	Pongo_abelii
ENSBTAG00000033413	DDX50	75	100.000	ENSPCAG00000009692	DDX50	83	100.000	Procavia_capensis
ENSBTAG00000033413	DDX50	79	84.913	ENSPCOG00000012574	DDX50	90	84.913	Propithecus_coquereli
ENSBTAG00000033413	DDX50	93	94.766	ENSPVAG00000009519	DDX50	86	94.766	Pteropus_vampyrus
ENSBTAG00000033413	DDX50	92	94.248	ENSRNOG00000000396	Ddx50	98	97.861	Rattus_norvegicus
ENSBTAG00000033413	DDX50	99	68.076	ENSRBIG00000036573	-	92	68.142	Rhinopithecus_bieti
ENSBTAG00000033413	DDX50	99	66.712	ENSRBIG00000039673	-	90	66.131	Rhinopithecus_bieti
ENSBTAG00000033413	DDX50	87	95.956	ENSRBIG00000042841	-	98	97.423	Rhinopithecus_bieti
ENSBTAG00000033413	DDX50	52	70.235	ENSRROG00000031940	-	88	75.380	Rhinopithecus_roxellana
ENSBTAG00000033413	DDX50	99	65.489	ENSRROG00000022853	-	92	65.051	Rhinopithecus_roxellana
ENSBTAG00000033413	DDX50	100	97.286	ENSRROG00000032158	DDX50	100	97.474	Rhinopithecus_roxellana
ENSBTAG00000033413	DDX50	100	95.022	ENSSBOG00000014441	DDX50	99	97.222	Saimiri_boliviensis_boliviensis
ENSBTAG00000033413	DDX50	88	81.307	ENSSHAG00000005690	DDX50	92	81.297	Sarcophilus_harrisii
ENSBTAG00000033413	DDX50	84	65.566	ENSSHAG00000005334	-	85	64.308	Sarcophilus_harrisii
ENSBTAG00000033413	DDX50	93	93.388	ENSSARG00000013553	DDX50	88	87.597	Sorex_araneus
ENSBTAG00000033413	DDX50	100	96.065	ENSSSCG00000010246	DDX50	99	96.065	Sus_scrofa
ENSBTAG00000033413	DDX50	83	97.059	ENSTBEG00000001085	DDX50	73	98.857	Tupaia_belangeri
ENSBTAG00000033413	DDX50	100	90.773	ENSTTRG00000012408	DDX50	99	90.773	Tursiops_truncatus
ENSBTAG00000033413	DDX50	100	97.290	ENSUAMG00000010976	DDX50	99	98.294	Ursus_americanus
ENSBTAG00000033413	DDX50	100	97.290	ENSUMAG00000007726	DDX50	99	97.290	Ursus_maritimus
ENSBTAG00000033413	DDX50	100	97.015	ENSVPAG00000000626	DDX50	100	97.015	Vicugna_pacos
ENSBTAG00000033413	DDX50	82	92.040	ENSVVUG00000020366	DDX50	98	98.930	Vulpes_vulpes