EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000038088 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 2634 bases
Position: chr18:65252212-65254845
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	1	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	2	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	3	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	4	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	5	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	6	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	7	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	8	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	9	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	10	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	11	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	12	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	13	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	14	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	15	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	16	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	17	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	18	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	19	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	20	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	21	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	22	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	23	24
ENSBTAP00000050573	zf-C2H2	PF00096.26	1.2e-144	24	24
ENSBTAP00000050573	zf-met	PF12874.7	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000055325	-	2634	-	ENSBTAP00000050573	877 (aa)	-	F1MBW2

Gene Model

Click here to download ENSBTAG00000038088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000038088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000038088	-	100	34.170	ENSBTAG00000045572	ZNF319	91	35.010
ENSBTAG00000038088	-	93	39.456	ENSBTAG00000017517	ZNF236	72	39.456
ENSBTAG00000038088	-	99	49.796	ENSBTAG00000040209	ZNF112	84	47.228
ENSBTAG00000038088	-	99	32.877	ENSBTAG00000040206	ZNF770	97	36.585
ENSBTAG00000038088	-	99	48.098	ENSBTAG00000014593	-	91	48.098
ENSBTAG00000038088	-	99	48.526	ENSBTAG00000016721	-	100	48.526
ENSBTAG00000038088	-	99	30.470	ENSBTAG00000021253	PRDM15	51	32.015
ENSBTAG00000038088	-	99	52.941	ENSBTAG00000032018	ZNF19	76	52.941
ENSBTAG00000038088	-	86	47.368	ENSBTAG00000008544	SALL1	56	47.368
ENSBTAG00000038088	-	95	36.000	ENSBTAG00000002291	ZBTB41	67	36.181
ENSBTAG00000038088	-	89	44.615	ENSBTAG00000038970	ZBTB14	52	44.615
ENSBTAG00000038088	-	95	55.729	ENSBTAG00000016191	ZNF32	88	55.729
ENSBTAG00000038088	-	86	38.835	ENSBTAG00000012333	ZNF524	97	41.667
ENSBTAG00000038088	-	99	58.289	ENSBTAG00000008902	ZNF345	89	58.289
ENSBTAG00000038088	-	95	37.853	ENSBTAG00000016299	ZNF784	82	37.037
ENSBTAG00000038088	-	99	58.730	ENSBTAG00000054022	ZNF250	95	56.774
ENSBTAG00000038088	-	99	33.569	ENSBTAG00000020754	ZNF526	82	33.569
ENSBTAG00000038088	-	99	53.929	ENSBTAG00000045531	-	59	53.659
ENSBTAG00000038088	-	94	35.294	ENSBTAG00000017397	ZNF423	98	35.294
ENSBTAG00000038088	-	99	47.532	ENSBTAG00000049158	ZNF596	83	47.222
ENSBTAG00000038088	-	89	35.688	ENSBTAG00000012600	GTF3A	75	36.162
ENSBTAG00000038088	-	99	52.616	ENSBTAG00000053591	-	97	50.000
ENSBTAG00000038088	-	100	48.120	ENSBTAG00000016077	ZNF317	87	48.120
ENSBTAG00000038088	-	99	58.571	ENSBTAG00000040358	-	100	58.571
ENSBTAG00000038088	-	99	48.875	ENSBTAG00000000868	ZFP1	80	48.875
ENSBTAG00000038088	-	99	45.574	ENSBTAG00000038322	-	77	45.574
ENSBTAG00000038088	-	99	53.073	ENSBTAG00000049610	ZNF234	84	53.073
ENSBTAG00000038088	-	86	30.337	ENSBTAG00000005478	PATZ1	57	30.571
ENSBTAG00000038088	-	99	47.923	ENSBTAG00000050322	-	80	47.923
ENSBTAG00000038088	-	99	49.677	ENSBTAG00000038869	ZNF383	79	49.677
ENSBTAG00000038088	-	99	52.128	ENSBTAG00000050035	ZNF226	86	52.128
ENSBTAG00000038088	-	91	36.634	ENSBTAG00000021789	ZNF574	93	34.520
ENSBTAG00000038088	-	99	51.000	ENSBTAG00000030348	ZNF582	77	51.000
ENSBTAG00000038088	-	99	49.905	ENSBTAG00000007714	ZNF235	78	50.331
ENSBTAG00000038088	-	95	44.948	ENSBTAG00000049339	-	85	44.948
ENSBTAG00000038088	-	99	37.637	ENSBTAG00000012111	PRDM5	74	37.637
ENSBTAG00000038088	-	99	56.071	ENSBTAG00000043974	-	64	55.749
ENSBTAG00000038088	-	100	47.231	ENSBTAG00000030470	-	93	47.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000038088	-	100	85.324	ENSCAFG00000029340	-	92	85.324	Canis_familiaris
ENSBTAG00000038088	-	99	63.591	ENSCAFG00020014929	-	98	59.974	Canis_lupus_dingo
ENSBTAG00000038088	-	100	85.324	ENSCAFG00020014950	-	99	85.324	Canis_lupus_dingo
ENSBTAG00000038088	-	99	61.538	ENSCPBG00000017494	-	95	61.201	Chrysemys_picta_bellii
ENSBTAG00000038088	-	99	71.278	ENSEASG00005020335	-	99	73.349	Equus_asinus_asinus
ENSBTAG00000038088	-	100	62.027	ENSEASG00005020355	-	94	62.027	Equus_asinus_asinus
ENSBTAG00000038088	-	99	84.624	ENSECAG00000002193	-	98	84.624	Equus_caballus
ENSBTAG00000038088	-	99	62.677	ENSECAG00000013505	-	93	62.460	Equus_caballus
ENSBTAG00000038088	-	99	62.289	ENSECAG00000002021	-	99	60.475	Equus_caballus
ENSBTAG00000038088	-	99	64.193	ENSGAGG00000020594	-	95	61.498	Gopherus_agassizii
ENSBTAG00000038088	-	99	52.878	ENSLACG00000004191	-	79	52.878	Latimeria_chalumnae
ENSBTAG00000038088	-	99	84.091	ENSMPUG00000006213	-	93	84.091	Mustela_putorius_furo
ENSBTAG00000038088	-	100	58.248	ENSMPUG00000008442	-	96	58.248	Mustela_putorius_furo
ENSBTAG00000038088	-	100	98.062	ENSOARG00000003770	-	97	98.062	Ovis_aries
ENSBTAG00000038088	-	99	55.978	ENSPPAG00000037706	-	96	55.978	Pan_paniscus
ENSBTAG00000038088	-	100	58.528	ENSPSIG00000004614	-	94	58.528	Pelodiscus_sinensis
ENSBTAG00000038088	-	99	52.903	ENSSBOG00000022380	-	84	54.011	Saimiri_boliviensis_boliviensis
ENSBTAG00000038088	-	98	88.271	ENSSSCG00000031774	-	90	88.271	Sus_scrofa
ENSBTAG00000038088	-	100	79.750	ENSUAMG00000028270	-	91	79.750	Ursus_americanus
ENSBTAG00000038088	-	100	64.698	ENSUAMG00000027381	-	98	64.698	Ursus_americanus
ENSBTAG00000038088	-	100	60.423	ENSUMAG00000004054	-	96	61.322	Ursus_maritimus
ENSBTAG00000038088	-	100	64.698	ENSUMAG00000004061	-	96	64.698	Ursus_maritimus
ENSBTAG00000038088	-	95	62.945	ENSVVUG00000002085	-	91	59.907	Vulpes_vulpes
ENSBTAG00000038088	-	100	85.324	ENSVVUG00000001996	-	99	85.324	Vulpes_vulpes