EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000038333 (Gene tree)
Gene ID: 513711
Gene Symbol: RBM23
Alias: -
Full Name: Bos taurus RNA binding motif protein 23 (RBM23)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 11903 bases
Position: chr10:21924846-21936748
Accession: NM_001075636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000023525	RRM_1	PF00076.22	2.5e-33	1	2
ENSBTAP00000023525	RRM_1	PF00076.22	2.5e-33	2	2
ENSBTAP00000060316	RRM_1	PF00076.22	2.6e-33	1	2
ENSBTAP00000060316	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000023525	-	2666	-	ENSBTAP00000023525	463 (aa)	XP_024853237	F1MY46
ENSBTAT00000082396	-	1772	-	ENSBTAP00000060316	464 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000038333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000038333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000038333	RBM23	98	56.144	ENSBTAG00000003949	RBM39	82	54.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000038333	RBM23	100	85.097	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSBTAG00000038333	RBM23	100	86.510	ENSAMEG00000007322	RBM23	100	86.296	Ailuropoda_melanoleuca
ENSBTAG00000038333	RBM23	70	81.571	ENSACAG00000001569	RBM23	96	65.574	Anolis_carolinensis
ENSBTAG00000038333	RBM23	100	65.011	ENSANAG00000033790	-	100	65.227	Aotus_nancymaae
ENSBTAG00000038333	RBM23	100	85.529	ENSCJAG00000008482	RBM23	100	84.233	Callithrix_jacchus
ENSBTAG00000038333	RBM23	100	82.974	ENSCAFG00000011217	RBM23	100	83.621	Canis_familiaris
ENSBTAG00000038333	RBM23	100	86.393	ENSCAFG00020007711	RBM23	100	87.689	Canis_lupus_dingo
ENSBTAG00000038333	RBM23	100	95.680	ENSCHIG00000025709	RBM23	100	95.680	Capra_hircus
ENSBTAG00000038333	RBM23	100	87.473	ENSTSYG00000014755	RBM23	100	92.086	Carlito_syrichta
ENSBTAG00000038333	RBM23	100	80.562	ENSCCAG00000025114	-	100	85.745	Cebus_capucinus
ENSBTAG00000038333	RBM23	100	70.940	ENSCCAG00000028584	-	100	79.496	Cebus_capucinus
ENSBTAG00000038333	RBM23	100	87.689	ENSCATG00000017832	RBM23	100	92.500	Cercocebus_atys
ENSBTAG00000038333	RBM23	100	87.473	ENSCSAG00000016213	RBM23	100	87.473	Chlorocebus_sabaeus
ENSBTAG00000038333	RBM23	69	78.997	ENSCPBG00000026096	RBM23	96	67.387	Chrysemys_picta_bellii
ENSBTAG00000038333	RBM23	74	92.151	ENSCANG00000001893	RBM23	100	78.458	Colobus_angolensis_palliatus
ENSBTAG00000038333	RBM23	100	84.665	ENSDNOG00000032457	RBM23	100	84.449	Dasypus_novemcinctus
ENSBTAG00000038333	RBM23	60	92.446	ENSDORG00000004926	-	100	91.727	Dipodomys_ordii
ENSBTAG00000038333	RBM23	96	84.479	ENSEASG00005011696	RBM23	95	86.547	Equus_asinus_asinus
ENSBTAG00000038333	RBM23	100	78.970	ENSECAG00000009910	RBM23	100	77.468	Equus_caballus
ENSBTAG00000038333	RBM23	100	84.698	ENSEEUG00000015560	RBM23	100	84.914	Erinaceus_europaeus
ENSBTAG00000038333	RBM23	100	86.825	ENSFCAG00000006632	RBM23	100	88.121	Felis_catus
ENSBTAG00000038333	RBM23	100	85.097	ENSGGOG00000015707	RBM23	100	87.041	Gorilla_gorilla
ENSBTAG00000038333	RBM23	100	77.970	ENSHGLG00100006114	RBM23	99	80.130	Heterocephalus_glaber_male
ENSBTAG00000038333	RBM23	60	90.288	ENSSTOG00000010354	RBM23	100	90.647	Ictidomys_tridecemlineatus
ENSBTAG00000038333	RBM23	100	81.425	ENSLAFG00000018567	RBM23	100	82.151	Loxodonta_africana
ENSBTAG00000038333	RBM23	100	87.905	ENSMFAG00000037595	RBM23	100	87.905	Macaca_fascicularis
ENSBTAG00000038333	RBM23	100	87.905	ENSMMUG00000018381	RBM23	100	87.905	Macaca_mulatta
ENSBTAG00000038333	RBM23	100	87.257	ENSMNEG00000042442	RBM23	100	87.041	Macaca_nemestrina
ENSBTAG00000038333	RBM23	74	89.535	ENSMLEG00000039954	RBM23	100	77.538	Mandrillus_leucophaeus
ENSBTAG00000038333	RBM23	100	86.609	ENSMICG00000006364	RBM23	100	90.647	Microcebus_murinus
ENSBTAG00000038333	RBM23	100	84.881	ENSMODG00000024448	RBM23	100	85.961	Monodelphis_domestica
ENSBTAG00000038333	RBM23	100	87.257	ENSMPUG00000007151	RBM23	100	86.825	Mustela_putorius_furo
ENSBTAG00000038333	RBM23	75	83.616	ENSMLUG00000012923	RBM23	100	79.025	Myotis_lucifugus
ENSBTAG00000038333	RBM23	100	87.257	ENSNLEG00000014792	RBM23	100	87.689	Nomascus_leucogenys
ENSBTAG00000038333	RBM23	53	94.891	ENSMEUG00000014548	-	60	94.891	Notamacropus_eugenii
ENSBTAG00000038333	RBM23	70	86.462	ENSOPRG00000001092	RBM23	100	84.881	Ochotona_princeps
ENSBTAG00000038333	RBM23	70	50.152	ENSOANG00000008908	-	100	50.456	Ornithorhynchus_anatinus
ENSBTAG00000038333	RBM23	69	91.589	ENSOCUG00000002006	RBM23	100	85.591	Oryctolagus_cuniculus
ENSBTAG00000038333	RBM23	75	86.111	ENSOGAG00000014794	RBM23	100	73.402	Otolemur_garnettii
ENSBTAG00000038333	RBM23	100	95.032	ENSOARG00000019398	RBM23	100	95.032	Ovis_aries
ENSBTAG00000038333	RBM23	100	85.961	ENSPPAG00000037922	RBM23	100	87.041	Pan_paniscus
ENSBTAG00000038333	RBM23	100	86.609	ENSPPRG00000023344	RBM23	100	87.905	Panthera_pardus
ENSBTAG00000038333	RBM23	74	92.733	ENSPTIG00000007831	RBM23	100	84.017	Panthera_tigris_altaica
ENSBTAG00000038333	RBM23	100	86.177	ENSPTRG00000006151	RBM23	100	86.825	Pan_troglodytes
ENSBTAG00000038333	RBM23	97	84.187	ENSPANG00000001324	RBM23	100	92.806	Papio_anubis
ENSBTAG00000038333	RBM23	100	84.233	ENSPCIG00000027773	RBM23	100	86.177	Phascolarctos_cinereus
ENSBTAG00000038333	RBM23	74	90.988	ENSPPYG00000005649	RBM23	100	79.914	Pongo_abelii
ENSBTAG00000038333	RBM23	100	64.363	ENSPCAG00000006669	RBM23	100	64.363	Procavia_capensis
ENSBTAG00000038333	RBM23	100	86.825	ENSPCOG00000018564	RBM23	100	91.367	Propithecus_coquereli
ENSBTAG00000038333	RBM23	100	84.017	ENSPVAG00000013785	RBM23	100	85.129	Pteropus_vampyrus
ENSBTAG00000038333	RBM23	100	86.609	ENSRBIG00000039276	RBM23	100	86.609	Rhinopithecus_bieti
ENSBTAG00000038333	RBM23	100	86.609	ENSRROG00000044026	RBM23	100	86.609	Rhinopithecus_roxellana
ENSBTAG00000038333	RBM23	100	84.404	ENSSBOG00000023037	-	100	82.831	Saimiri_boliviensis_boliviensis
ENSBTAG00000038333	RBM23	96	63.193	ENSSBOG00000034977	-	99	60.349	Saimiri_boliviensis_boliviensis
ENSBTAG00000038333	RBM23	69	90.000	ENSSHAG00000012932	RBM23	100	84.731	Sarcophilus_harrisii
ENSBTAG00000038333	RBM23	100	86.393	ENSSARG00000005165	RBM23	100	86.393	Sorex_araneus
ENSBTAG00000038333	RBM23	70	79.635	ENSSPUG00000000489	RBM23	96	68.085	Sphenodon_punctatus
ENSBTAG00000038333	RBM23	100	83.656	ENSSSCG00000026700	RBM23	100	86.882	Sus_scrofa
ENSBTAG00000038333	RBM23	100	81.897	ENSTBEG00000011543	RBM23	100	85.129	Tupaia_belangeri
ENSBTAG00000038333	RBM23	100	83.801	ENSTTRG00000001500	RBM23	100	84.665	Tursiops_truncatus
ENSBTAG00000038333	RBM23	100	87.689	ENSUAMG00000008524	RBM23	100	87.473	Ursus_americanus
ENSBTAG00000038333	RBM23	100	87.689	ENSUMAG00000014075	RBM23	100	87.473	Ursus_maritimus
ENSBTAG00000038333	RBM23	100	86.825	ENSVVUG00000019815	RBM23	100	87.905	Vulpes_vulpes
ENSBTAG00000038333	RBM23	66	73.871	ENSXETG00000022623	rbm23	100	58.686	Xenopus_tropicalis