EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000040358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 34676 bases
Position: chr18:64684152-64718827
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	1	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	2	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	3	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	4	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	5	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	6	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	7	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	8	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	9	10
ENSBTAP00000022341	zf-C2H2	PF00096.26	1.1e-61	10	10
ENSBTAP00000022341	zf-met	PF12874.7	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000022341	-	840	-	ENSBTAP00000022341	280 (aa)	-	F1MM01

Gene Model

Click here to download ENSBTAG00000040358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000040358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000040358	-	100	46.382	ENSBTAG00000038869	ZNF383	73	46.382
ENSBTAG00000040358	-	100	47.653	ENSBTAG00000030470	-	74	47.653
ENSBTAG00000040358	-	100	43.529	ENSBTAG00000017517	ZNF236	61	43.529
ENSBTAG00000040358	-	100	55.000	ENSBTAG00000049158	ZNF596	82	55.000
ENSBTAG00000040358	-	100	52.918	ENSBTAG00000032018	ZNF19	70	52.918
ENSBTAG00000040358	-	100	57.143	ENSBTAG00000007714	ZNF235	73	57.143
ENSBTAG00000040358	-	99	40.132	ENSBTAG00000052323	MAZ	58	38.650
ENSBTAG00000040358	-	100	45.238	ENSBTAG00000038322	-	77	45.238
ENSBTAG00000040358	-	100	45.126	ENSBTAG00000053591	-	97	45.126
ENSBTAG00000040358	-	100	42.593	ENSBTAG00000040206	ZNF770	97	42.593
ENSBTAG00000040358	-	100	58.571	ENSBTAG00000040209	ZNF112	80	58.571
ENSBTAG00000040358	-	100	38.849	ENSBTAG00000002291	ZBTB41	64	39.247
ENSBTAG00000040358	-	99	38.095	ENSBTAG00000012600	GTF3A	74	38.095
ENSBTAG00000040358	-	100	51.471	ENSBTAG00000016721	-	99	51.471
ENSBTAG00000040358	-	100	37.821	ENSBTAG00000045572	ZNF319	91	37.821
ENSBTAG00000040358	-	100	51.449	ENSBTAG00000016077	ZNF317	86	51.449
ENSBTAG00000040358	-	100	57.143	ENSBTAG00000049610	ZNF234	84	57.143
ENSBTAG00000040358	-	100	53.237	ENSBTAG00000043974	-	51	54.762
ENSBTAG00000040358	-	100	58.794	ENSBTAG00000054022	ZNF250	91	59.420
ENSBTAG00000040358	-	100	39.502	ENSBTAG00000012111	PRDM5	73	39.502
ENSBTAG00000040358	-	100	58.333	ENSBTAG00000008902	ZNF345	89	58.333
ENSBTAG00000040358	-	100	33.856	ENSBTAG00000020754	ZNF526	81	33.594
ENSBTAG00000040358	-	100	43.726	ENSBTAG00000049339	-	81	43.726
ENSBTAG00000040358	-	100	53.571	ENSBTAG00000030348	ZNF582	65	53.571
ENSBTAG00000040358	-	100	55.357	ENSBTAG00000050035	ZNF226	80	55.357
ENSBTAG00000040358	-	99	38.095	ENSBTAG00000051572	ZNF646	70	30.315
ENSBTAG00000040358	-	100	50.323	ENSBTAG00000014593	-	77	52.128
ENSBTAG00000040358	-	100	50.962	ENSBTAG00000021789	ZNF574	70	38.838
ENSBTAG00000040358	-	100	60.914	ENSBTAG00000000868	ZFP1	79	60.914
ENSBTAG00000040358	-	100	52.128	ENSBTAG00000016191	ZNF32	76	52.128
ENSBTAG00000040358	-	100	58.571	ENSBTAG00000038088	-	99	58.571
ENSBTAG00000040358	-	98	35.393	ENSBTAG00000016299	ZNF784	68	35.393
ENSBTAG00000040358	-	100	53.488	ENSBTAG00000050322	-	73	53.488
ENSBTAG00000040358	-	100	40.741	ENSBTAG00000012333	ZNF524	93	38.272
ENSBTAG00000040358	-	99	33.913	ENSBTAG00000005478	PATZ1	54	33.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000040358	-	100	50.403	ENSAMXG00000034096	-	88	50.403	Astyanax_mexicanus
ENSBTAG00000040358	-	100	52.768	ENSAMXG00000044028	-	96	54.694	Astyanax_mexicanus
ENSBTAG00000040358	-	100	54.412	ENSAMXG00000029783	-	87	54.412	Astyanax_mexicanus
ENSBTAG00000040358	-	100	52.174	ENSAMXG00000043019	-	90	52.174	Astyanax_mexicanus
ENSBTAG00000040358	-	100	55.357	ENSAMXG00000000353	-	93	55.357	Astyanax_mexicanus
ENSBTAG00000040358	-	100	55.357	ENSCSAG00000000471	-	98	55.357	Chlorocebus_sabaeus
ENSBTAG00000040358	-	100	55.512	ENSCPBG00000009609	-	80	55.512	Chrysemys_picta_bellii
ENSBTAG00000040358	-	100	63.929	ENSCPBG00000002430	-	76	60.498	Chrysemys_picta_bellii
ENSBTAG00000040358	-	100	55.357	ENSDNOG00000042588	-	89	55.357	Dasypus_novemcinctus
ENSBTAG00000040358	-	100	34.571	ENSDNOG00000047529	-	90	40.191	Dasypus_novemcinctus
ENSBTAG00000040358	-	100	47.451	ENSEBUG00000016969	-	76	47.451	Eptatretus_burgeri
ENSBTAG00000040358	-	100	50.196	ENSEBUG00000016164	-	72	50.196	Eptatretus_burgeri
ENSBTAG00000040358	-	100	51.587	ENSEBUG00000013221	-	81	51.587	Eptatretus_burgeri
ENSBTAG00000040358	-	100	51.205	ENSELUG00000019008	-	88	45.136	Esox_lucius
ENSBTAG00000040358	-	100	53.846	ENSFCAG00000043966	-	100	54.622	Felis_catus
ENSBTAG00000040358	-	100	47.656	ENSGAFG00000013048	-	68	47.656	Gambusia_affinis
ENSBTAG00000040358	-	100	48.746	ENSGAFG00000021131	-	82	48.746	Gambusia_affinis
ENSBTAG00000040358	-	100	56.786	ENSGGOG00000042802	-	98	56.786	Gorilla_gorilla
ENSBTAG00000040358	-	100	48.561	ENSHCOG00000014713	-	98	48.214	Hippocampus_comes
ENSBTAG00000040358	-	100	49.225	ENSHCOG00000019512	-	90	49.225	Hippocampus_comes
ENSBTAG00000040358	-	100	56.786	ENSMFAG00000008648	-	98	56.786	Macaca_fascicularis
ENSBTAG00000040358	-	100	56.786	ENSMNEG00000001556	-	98	56.786	Macaca_nemestrina
ENSBTAG00000040358	-	100	56.429	ENSMLEG00000007035	-	98	56.429	Mandrillus_leucophaeus
ENSBTAG00000040358	-	100	52.857	ENSMAUG00000015263	-	65	52.857	Mesocricetus_auratus
ENSBTAG00000040358	-	100	53.597	ENSMOCG00000003394	-	68	53.597	Microtus_ochrogaster
ENSBTAG00000040358	-	100	51.449	ENSMODG00000028916	-	66	51.449	Monodelphis_domestica
ENSBTAG00000040358	-	100	48.077	ENSMPUG00000006562	-	56	48.736	Mustela_putorius_furo
ENSBTAG00000040358	-	100	60.377	ENSNBRG00000010194	-	83	45.918	Neolamprologus_brichardi
ENSBTAG00000040358	-	100	56.429	ENSNLEG00000018988	-	98	56.429	Nomascus_leucogenys
ENSBTAG00000040358	-	100	51.515	ENSMEUG00000006978	-	87	51.590	Notamacropus_eugenii
ENSBTAG00000040358	-	100	52.857	ENSMEUG00000012153	-	63	52.857	Notamacropus_eugenii
ENSBTAG00000040358	-	100	46.119	ENSOGAG00000024538	-	59	46.154	Otolemur_garnettii
ENSBTAG00000040358	-	100	56.786	ENSPPAG00000014496	-	98	56.786	Pan_paniscus
ENSBTAG00000040358	-	100	56.429	ENSPANG00000030207	-	98	56.429	Papio_anubis
ENSBTAG00000040358	-	100	56.641	ENSPSIG00000010405	-	99	56.641	Pelodiscus_sinensis
ENSBTAG00000040358	-	100	54.074	ENSPSIG00000009650	-	70	54.074	Pelodiscus_sinensis
ENSBTAG00000040358	-	100	53.214	ENSPEMG00000010242	-	68	53.214	Peromyscus_maniculatus_bairdii
ENSBTAG00000040358	-	100	46.552	ENSPLAG00000010389	-	67	46.552	Poecilia_latipinna
ENSBTAG00000040358	-	100	48.627	ENSPLAG00000021062	-	88	48.627	Poecilia_latipinna
ENSBTAG00000040358	-	100	48.047	ENSPLAG00000020710	-	69	48.047	Poecilia_latipinna
ENSBTAG00000040358	-	100	53.069	ENSPCAG00000009106	-	73	53.069	Procavia_capensis
ENSBTAG00000040358	-	100	39.768	ENSPNYG00000024243	-	94	41.343	Pundamilia_nyererei
ENSBTAG00000040358	-	100	53.957	ENSPNAG00000018644	-	94	53.957	Pygocentrus_nattereri
ENSBTAG00000040358	-	100	54.152	ENSSHAG00000001415	-	83	54.152	Sarcophilus_harrisii
ENSBTAG00000040358	-	100	52.107	ENSSDUG00000009534	-	67	52.107	Seriola_dumerili
ENSBTAG00000040358	-	100	51.071	ENSSLDG00000013760	-	94	51.071	Seriola_lalandi_dorsalis
ENSBTAG00000040358	-	100	55.000	ENSSPUG00000007147	-	90	55.000	Sphenodon_punctatus
ENSBTAG00000040358	-	100	48.571	ENSTRUG00000006896	-	86	48.571	Takifugu_rubripes
ENSBTAG00000040358	-	100	56.071	ENSVPAG00000011867	-	89	56.071	Vicugna_pacos
ENSBTAG00000040358	-	100	42.969	ENSXCOG00000009794	-	76	42.969	Xiphophorus_couchianus