EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000040477 (Gene tree)
Gene ID: 530880
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 58014 bases
Position: chr16:47167118-47225131
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000063469	ResIII	PF04851.15	4.8e-08	1	1
ENSBTAP00000010688	ResIII	PF04851.15	4.8e-08	1	1
ENSBTAP00000066417	ResIII	PF04851.15	5.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000083255	CHD5-202	6313	-	ENSBTAP00000066417	1955 (aa)	-	-
ENSBTAT00000010688	CHD5-203	5948	-	ENSBTAP00000010688	1818 (aa)	-	F1MFF9
ENSBTAT00000077250	CHD5-201	5890	-	ENSBTAP00000063469	1814 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000040477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000040477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000040477	CHD5	98	70.856	ENSBTAG00000014377	CHD3	92	68.881
ENSBTAG00000040477	CHD5	98	71.610	ENSBTAG00000014734	CHD4	92	71.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000040477	CHD5	100	96.920	ENSG00000116254	CHD5	96	97.443	Homo_sapiens
ENSBTAG00000040477	CHD5	99	96.918	ENSAMEG00000009880	CHD5	94	96.918	Ailuropoda_melanoleuca
ENSBTAG00000040477	CHD5	99	78.289	ENSACIG00000012582	chd5	97	77.007	Amphilophus_citrinellus
ENSBTAG00000040477	CHD5	99	79.038	ENSAOCG00000020356	chd5	90	78.103	Amphiprion_ocellaris
ENSBTAG00000040477	CHD5	98	82.227	ENSAPLG00000015475	CHD5	94	82.337	Anas_platyrhynchos
ENSBTAG00000040477	CHD5	100	84.389	ENSACAG00000002441	CHD5	92	84.182	Anolis_carolinensis
ENSBTAG00000040477	CHD5	93	96.925	ENSANAG00000001078	CHD5	91	96.925	Aotus_nancymaae
ENSBTAG00000040477	CHD5	99	74.686	ENSACLG00000003012	chd5	96	73.330	Astatotilapia_calliptera
ENSBTAG00000040477	CHD5	90	84.146	ENSAMXG00000008921	chd5	92	90.698	Astyanax_mexicanus
ENSBTAG00000040477	CHD5	100	97.085	ENSCJAG00000000101	CHD5	93	97.085	Callithrix_jacchus
ENSBTAG00000040477	CHD5	100	97.690	ENSCAFG00000019545	CHD5	100	97.690	Canis_familiaris
ENSBTAG00000040477	CHD5	99	97.687	ENSCAFG00020008689	CHD5	90	97.687	Canis_lupus_dingo
ENSBTAG00000040477	CHD5	99	97.745	ENSCHIG00000015027	CHD5	91	97.745	Capra_hircus
ENSBTAG00000040477	CHD5	99	91.472	ENSTSYG00000033991	CHD5	93	91.820	Carlito_syrichta
ENSBTAG00000040477	CHD5	100	95.765	ENSCAPG00000009294	CHD5	94	95.765	Cavia_aperea
ENSBTAG00000040477	CHD5	100	95.820	ENSCPOG00000025080	CHD5	94	95.820	Cavia_porcellus
ENSBTAG00000040477	CHD5	100	96.700	ENSCCAG00000024756	CHD5	93	96.700	Cebus_capucinus
ENSBTAG00000040477	CHD5	100	96.975	ENSCATG00000043011	CHD5	94	96.975	Cercocebus_atys
ENSBTAG00000040477	CHD5	100	96.150	ENSCLAG00000010589	CHD5	94	96.150	Chinchilla_lanigera
ENSBTAG00000040477	CHD5	100	96.865	ENSCSAG00000000733	CHD5	93	96.865	Chlorocebus_sabaeus
ENSBTAG00000040477	CHD5	100	90.680	ENSCPBG00000019363	CHD5	100	90.570	Chrysemys_picta_bellii
ENSBTAG00000040477	CHD5	100	96.920	ENSCANG00000032302	CHD5	93	96.920	Colobus_angolensis_palliatus
ENSBTAG00000040477	CHD5	55	96.976	ENSCGRG00001011042	Chd5	94	96.976	Cricetulus_griseus_chok1gshd
ENSBTAG00000040477	CHD5	100	95.710	ENSCGRG00000011341	Chd5	94	95.710	Cricetulus_griseus_crigri
ENSBTAG00000040477	CHD5	99	77.302	ENSDARG00000105083	chd5	97	78.214	Danio_rerio
ENSBTAG00000040477	CHD5	98	67.655	ENSDARG00000025789	chd4b	92	67.622	Danio_rerio
ENSBTAG00000040477	CHD5	100	92.134	ENSDNOG00000046342	CHD5	93	92.134	Dasypus_novemcinctus
ENSBTAG00000040477	CHD5	100	96.154	ENSDORG00000005923	Chd5	94	96.154	Dipodomys_ordii
ENSBTAG00000040477	CHD5	99	95.925	ENSEASG00005021464	CHD5	95	97.521	Equus_asinus_asinus
ENSBTAG00000040477	CHD5	99	95.485	ENSECAG00000025043	CHD5	95	98.750	Equus_caballus
ENSBTAG00000040477	CHD5	75	99.535	ENSEEUG00000002772	CHD5	71	99.535	Erinaceus_europaeus
ENSBTAG00000040477	CHD5	99	76.066	ENSELUG00000010742	chd5	89	91.628	Esox_lucius
ENSBTAG00000040477	CHD5	100	97.525	ENSFCAG00000006319	CHD5	93	97.525	Felis_catus
ENSBTAG00000040477	CHD5	99	89.151	ENSFALG00000009740	CHD5	93	89.041	Ficedula_albicollis
ENSBTAG00000040477	CHD5	99	95.815	ENSFDAG00000012881	CHD5	93	95.273	Fukomys_damarensis
ENSBTAG00000040477	CHD5	100	89.303	ENSGALG00000000747	CHD5	93	88.974	Gallus_gallus
ENSBTAG00000040477	CHD5	59	82.239	ENSGACG00000004389	chd5	92	81.970	Gasterosteus_aculeatus
ENSBTAG00000040477	CHD5	100	88.000	ENSGAGG00000001590	CHD5	97	95.146	Gopherus_agassizii
ENSBTAG00000040477	CHD5	100	96.975	ENSGGOG00000000708	CHD5	94	96.975	Gorilla_gorilla
ENSBTAG00000040477	CHD5	99	76.287	ENSHBUG00000013453	chd5	88	91.943	Haplochromis_burtoni
ENSBTAG00000040477	CHD5	100	95.985	ENSHGLG00000018184	CHD5	96	95.985	Heterocephalus_glaber_female
ENSBTAG00000040477	CHD5	100	88.962	ENSHGLG00100013261	CHD5	93	87.842	Heterocephalus_glaber_male
ENSBTAG00000040477	CHD5	99	78.125	ENSIPUG00000005446	chd5	97	76.605	Ictalurus_punctatus
ENSBTAG00000040477	CHD5	100	96.865	ENSSTOG00000002778	CHD5	94	96.472	Ictidomys_tridecemlineatus
ENSBTAG00000040477	CHD5	100	95.820	ENSJJAG00000019072	Chd5	93	95.820	Jaculus_jaculus
ENSBTAG00000040477	CHD5	99	81.137	ENSLOCG00000004944	chd5	91	81.161	Lepisosteus_oculatus
ENSBTAG00000040477	CHD5	99	97.192	ENSLAFG00000006348	CHD5	94	97.192	Loxodonta_africana
ENSBTAG00000040477	CHD5	100	96.920	ENSMFAG00000033993	CHD5	100	96.920	Macaca_fascicularis
ENSBTAG00000040477	CHD5	100	96.865	ENSMMUG00000016838	CHD5	94	96.582	Macaca_mulatta
ENSBTAG00000040477	CHD5	100	96.920	ENSMNEG00000040044	CHD5	93	96.920	Macaca_nemestrina
ENSBTAG00000040477	CHD5	100	93.330	ENSMLEG00000039166	CHD5	94	93.330	Mandrillus_leucophaeus
ENSBTAG00000040477	CHD5	99	74.297	ENSMZEG00005000841	chd5	90	79.466	Maylandia_zebra
ENSBTAG00000040477	CHD5	99	89.358	ENSMGAG00000001055	CHD5	93	89.029	Meleagris_gallopavo
ENSBTAG00000040477	CHD5	96	98.393	ENSMICG00000017862	CHD5	93	98.324	Microcebus_murinus
ENSBTAG00000040477	CHD5	100	95.600	ENSMOCG00000011049	Chd5	93	95.600	Microtus_ochrogaster
ENSBTAG00000040477	CHD5	92	80.828	ENSMODG00000006294	CHD5	72	94.342	Monodelphis_domestica
ENSBTAG00000040477	CHD5	99	77.856	ENSMALG00000002831	chd5	95	77.032	Monopterus_albus
ENSBTAG00000040477	CHD5	100	95.820	MGP_CAROLIEiJ_G0026857	Chd5	93	95.820	Mus_caroli
ENSBTAG00000040477	CHD5	100	95.710	ENSMUSG00000005045	Chd5	93	95.710	Mus_musculus
ENSBTAG00000040477	CHD5	100	95.710	MGP_PahariEiJ_G0029205	Chd5	93	95.710	Mus_pahari
ENSBTAG00000040477	CHD5	100	95.710	MGP_SPRETEiJ_G0027850	Chd5	93	95.710	Mus_spretus
ENSBTAG00000040477	CHD5	100	93.876	ENSMPUG00000007122	CHD5	94	92.599	Mustela_putorius_furo
ENSBTAG00000040477	CHD5	99	95.319	ENSNGAG00000019812	Chd5	90	95.319	Nannospalax_galili
ENSBTAG00000040477	CHD5	100	94.389	ENSNLEG00000010320	CHD5	94	94.169	Nomascus_leucogenys
ENSBTAG00000040477	CHD5	87	92.157	ENSOPRG00000004304	CHD5	81	92.053	Ochotona_princeps
ENSBTAG00000040477	CHD5	100	95.820	ENSODEG00000010262	CHD5	94	95.820	Octodon_degus
ENSBTAG00000040477	CHD5	99	77.287	ENSONIG00000000619	chd5	93	76.455	Oreochromis_niloticus
ENSBTAG00000040477	CHD5	99	71.429	ENSOANG00000001819	CHD5	89	76.519	Ornithorhynchus_anatinus
ENSBTAG00000040477	CHD5	99	97.138	ENSOGAG00000005703	CHD5	93	97.138	Otolemur_garnettii
ENSBTAG00000040477	CHD5	100	98.568	ENSOARG00000013425	CHD5	94	98.568	Ovis_aries
ENSBTAG00000040477	CHD5	100	96.921	ENSPPAG00000034048	CHD5	94	96.921	Pan_paniscus
ENSBTAG00000040477	CHD5	100	96.865	ENSPPRG00000009453	CHD5	93	96.865	Panthera_pardus
ENSBTAG00000040477	CHD5	100	89.280	ENSPTIG00000013926	CHD5	94	88.847	Panthera_tigris_altaica
ENSBTAG00000040477	CHD5	100	96.921	ENSPTRG00000000075	CHD5	93	96.921	Pan_troglodytes
ENSBTAG00000040477	CHD5	100	97.030	ENSPANG00000006765	CHD5	93	97.030	Papio_anubis
ENSBTAG00000040477	CHD5	98	78.768	ENSPKIG00000004282	chd5	91	92.093	Paramormyrops_kingsleyae
ENSBTAG00000040477	CHD5	99	83.470	ENSPSIG00000006414	CHD5	97	83.634	Pelodiscus_sinensis
ENSBTAG00000040477	CHD5	67	97.054	ENSPEMG00000014799	Chd5	92	97.054	Peromyscus_maniculatus_bairdii
ENSBTAG00000040477	CHD5	100	92.873	ENSPCIG00000028310	CHD5	92	92.763	Phascolarctos_cinereus
ENSBTAG00000040477	CHD5	99	75.944	ENSPLAG00000005343	chd5	96	74.327	Poecilia_latipinna
ENSBTAG00000040477	CHD5	96	97.835	ENSPPYG00000001952	CHD5	94	97.767	Pongo_abelii
ENSBTAG00000040477	CHD5	100	97.580	ENSPCOG00000022930	CHD5	93	97.580	Propithecus_coquereli
ENSBTAG00000040477	CHD5	99	78.311	ENSPNYG00000003183	chd5	97	76.211	Pundamilia_nyererei
ENSBTAG00000040477	CHD5	100	95.930	ENSRNOG00000011268	Chd5	94	95.877	Rattus_norvegicus
ENSBTAG00000040477	CHD5	100	97.325	ENSRBIG00000032140	CHD5	95	96.751	Rhinopithecus_bieti
ENSBTAG00000040477	CHD5	100	96.700	ENSRROG00000041146	CHD5	93	96.700	Rhinopithecus_roxellana
ENSBTAG00000040477	CHD5	100	92.849	ENSSBOG00000001955	CHD5	100	96.916	Saimiri_boliviensis_boliviensis
ENSBTAG00000040477	CHD5	99	86.857	ENSSHAG00000018641	CHD5	96	86.802	Sarcophilus_harrisii
ENSBTAG00000040477	CHD5	91	88.841	ENSSFOG00015006296	chd5	86	92.558	Scleropages_formosus
ENSBTAG00000040477	CHD5	99	78.890	ENSSDUG00000017526	chd5	91	91.163	Seriola_dumerili
ENSBTAG00000040477	CHD5	99	81.343	ENSSPUG00000010622	CHD5	94	80.729	Sphenodon_punctatus
ENSBTAG00000040477	CHD5	100	98.185	ENSSSCG00000003366	CHD5	100	98.185	Sus_scrofa
ENSBTAG00000040477	CHD5	98	83.223	ENSTGUG00000002634	-	96	83.333	Taeniopygia_guttata
ENSBTAG00000040477	CHD5	55	80.575	ENSTNIG00000004346	chd5	99	80.915	Tetraodon_nigroviridis
ENSBTAG00000040477	CHD5	100	95.655	ENSTTRG00000010468	CHD5	93	95.655	Tursiops_truncatus
ENSBTAG00000040477	CHD5	99	97.632	ENSUAMG00000024509	CHD5	95	96.582	Ursus_americanus
ENSBTAG00000040477	CHD5	100	91.731	ENSUMAG00000024173	CHD5	95	91.731	Ursus_maritimus
ENSBTAG00000040477	CHD5	99	96.698	ENSVVUG00000026480	CHD5	94	97.967	Vulpes_vulpes
ENSBTAG00000040477	CHD5	99	80.380	ENSXETG00000002904	chd5	96	79.064	Xenopus_tropicalis
ENSBTAG00000040477	CHD5	60	83.871	ENSXCOG00000014202	chd5	94	83.871	Xiphophorus_couchianus