EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000046336 (Gene tree)
Gene ID: 508834
Gene Symbol: -
Alias: -
Full Name: Bos taurus RNA-binding protein S1%2C serine-rich domain-like (LOC508834)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 2862 bases
Position: chr7:16031475-16034336
Accession: NM_001206658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000055539	RRM_1	PF00076.22	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000063470	-	1426	-	ENSBTAP00000055539	294 (aa)	XP_024849819	G3N117

Gene Model

Click here to download ENSBTAG00000046336's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG
bta03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000046336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000046336	-	69	55.924	ENSAMXG00000006330	-	50	52.033	Astyanax_mexicanus
ENSBTAG00000046336	-	75	81.498	ENSCHIG00000019523	-	80	79.654	Capra_hircus
ENSBTAG00000046336	-	50	64.667	ENSCATG00000042361	-	64	71.212	Cercocebus_atys
ENSBTAG00000046336	-	70	58.371	ENSCSAG00000005219	-	81	55.000	Chlorocebus_sabaeus
ENSBTAG00000046336	-	70	58.252	ENSSTOG00000013200	RNPS1	83	60.000	Ictidomys_tridecemlineatus
ENSBTAG00000046336	-	69	53.521	ENSJJAG00000010326	-	79	55.310	Jaculus_jaculus
ENSBTAG00000046336	-	76	57.965	ENSMFAG00000044121	-	83	59.471	Macaca_fascicularis
ENSBTAG00000046336	-	65	42.932	ENSODEG00000002513	-	58	51.515	Octodon_degus
ENSBTAG00000046336	-	51	49.351	ENSODEG00000017258	-	56	50.000	Octodon_degus
ENSBTAG00000046336	-	57	76.786	ENSOARG00000004423	-	76	76.437	Ovis_aries