EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000047365 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 4002 bases
Position: chr2:43458207-43462208
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000072493	Smg4_UPF3	PF03467.15	4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000064239	-	663	-	ENSBTAP00000072493	220 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000047365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000047365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000047365	-	72	67.722	ENSBTAG00000035615	UPF3B	52	67.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000047365	-	72	68.125	ENSG00000125351	UPF3B	74	67.702	Homo_sapiens
ENSBTAG00000047365	-	95	83.810	ENSG00000169062	UPF3A	99	74.038	Homo_sapiens
ENSBTAG00000047365	-	71	77.707	ENSACIG00000020468	upf3a	70	82.857	Amphilophus_citrinellus
ENSBTAG00000047365	-	72	68.125	ENSANAG00000021894	-	70	70.667	Aotus_nancymaae
ENSBTAG00000047365	-	75	60.241	ENSANAG00000033169	-	54	67.647	Aotus_nancymaae
ENSBTAG00000047365	-	71	67.089	ENSAMXG00000000199	upf3b	54	66.250	Astyanax_mexicanus
ENSBTAG00000047365	-	72	67.500	ENSCJAG00000004975	UPF3B	70	70.000	Callithrix_jacchus
ENSBTAG00000047365	-	76	65.089	ENSCHIG00000018011	-	52	67.702	Capra_hircus
ENSBTAG00000047365	-	76	65.089	ENSTSYG00000014690	UPF3B	70	64.331	Carlito_syrichta
ENSBTAG00000047365	-	72	68.125	ENSCATG00000017506	UPF3B	70	70.667	Cercocebus_atys
ENSBTAG00000047365	-	64	68.794	ENSCLAG00000000093	-	97	68.794	Chinchilla_lanigera
ENSBTAG00000047365	-	67	54.054	ENSCING00000008396	-	93	54.054	Ciona_intestinalis
ENSBTAG00000047365	-	72	68.125	ENSCANG00000029220	UPF3B	50	68.125	Colobus_angolensis_palliatus
ENSBTAG00000047365	-	88	80.788	ENSDNOG00000034391	UPF3A	50	78.027	Dasypus_novemcinctus
ENSBTAG00000047365	-	62	64.474	ENSFHEG00000010418	upf3a	81	65.772	Fundulus_heteroclitus
ENSBTAG00000047365	-	82	77.838	ENSGALG00000016815	-	98	73.239	Gallus_gallus
ENSBTAG00000047365	-	70	63.462	ENSGACG00000017435	upf3b	55	65.772	Gasterosteus_aculeatus
ENSBTAG00000047365	-	72	81.646	ENSGAGG00000001952	UPF3A	80	89.362	Gopherus_agassizii
ENSBTAG00000047365	-	72	68.125	ENSGGOG00000023995	UPF3B	58	71.930	Gorilla_gorilla
ENSBTAG00000047365	-	95	74.641	ENSHGLG00000001544	UPF3A	50	73.684	Heterocephalus_glaber_female
ENSBTAG00000047365	-	95	74.641	ENSHGLG00100013244	UPF3A	50	73.684	Heterocephalus_glaber_male
ENSBTAG00000047365	-	75	72.121	ENSHCOG00000013985	upf3a	65	76.471	Hippocampus_comes
ENSBTAG00000047365	-	98	78.802	ENSSTOG00000030282	-	91	80.365	Ictidomys_tridecemlineatus
ENSBTAG00000047365	-	96	80.751	ENSJJAG00000018099	-	99	80.751	Jaculus_jaculus
ENSBTAG00000047365	-	72	68.125	ENSMFAG00000045414	UPF3B	70	70.667	Macaca_fascicularis
ENSBTAG00000047365	-	68	56.329	ENSMFAG00000045275	-	75	56.329	Macaca_fascicularis
ENSBTAG00000047365	-	72	68.125	ENSMMUG00000020222	UPF3B	70	70.667	Macaca_mulatta
ENSBTAG00000047365	-	66	55.844	ENSMMUG00000046682	-	75	55.844	Macaca_mulatta
ENSBTAG00000047365	-	68	55.696	ENSMNEG00000040898	-	75	55.696	Macaca_nemestrina
ENSBTAG00000047365	-	72	68.125	ENSMNEG00000039794	UPF3B	70	70.667	Macaca_nemestrina
ENSBTAG00000047365	-	72	68.125	ENSMLEG00000010999	UPF3B	70	70.667	Mandrillus_leucophaeus
ENSBTAG00000047365	-	72	68.125	ENSMICG00000001743	UPF3B	50	68.125	Microcebus_murinus
ENSBTAG00000047365	-	64	75.714	ENSMICG00000042420	-	95	72.109	Microcebus_murinus
ENSBTAG00000047365	-	95	81.429	ENSMOCG00000000550	Upf3a	59	80.383	Microtus_ochrogaster
ENSBTAG00000047365	-	56	70.732	ENSMALG00000002454	-	63	77.193	Monopterus_albus
ENSBTAG00000047365	-	95	80.861	MGP_CAROLIEiJ_G0030848	Upf3a	51	79.904	Mus_caroli
ENSBTAG00000047365	-	72	63.125	ENSNBRG00000011560	upf3b	76	70.270	Neolamprologus_brichardi
ENSBTAG00000047365	-	78	53.801	ENSNLEG00000027516	-	77	56.173	Nomascus_leucogenys
ENSBTAG00000047365	-	72	68.125	ENSNLEG00000014897	UPF3B	61	71.930	Nomascus_leucogenys
ENSBTAG00000047365	-	72	57.059	ENSODEG00000007164	-	65	60.135	Octodon_degus
ENSBTAG00000047365	-	53	60.169	ENSODEG00000000596	-	59	59.322	Octodon_degus
ENSBTAG00000047365	-	62	59.854	ENSODEG00000006064	-	69	59.854	Octodon_degus
ENSBTAG00000047365	-	99	74.771	ENSODEG00000009176	-	86	74.771	Octodon_degus
ENSBTAG00000047365	-	67	63.514	ENSORLG00020003758	upf3b	53	62.745	Oryzias_latipes_hni
ENSBTAG00000047365	-	95	79.904	ENSOGAG00000004788	UPF3A	51	79.904	Otolemur_garnettii
ENSBTAG00000047365	-	72	68.125	ENSPPAG00000040390	UPF3B	58	71.930	Pan_paniscus
ENSBTAG00000047365	-	72	68.125	ENSPTIG00000015264	UPF3B	50	68.125	Panthera_tigris_altaica
ENSBTAG00000047365	-	72	68.125	ENSPTRG00000022228	UPF3B	58	71.930	Pan_troglodytes
ENSBTAG00000047365	-	71	53.614	ENSPANG00000029350	-	76	55.696	Papio_anubis
ENSBTAG00000047365	-	72	68.125	ENSPANG00000000900	UPF3B	70	70.667	Papio_anubis
ENSBTAG00000047365	-	69	69.737	ENSPKIG00000019226	upf3b	75	72.650	Paramormyrops_kingsleyae
ENSBTAG00000047365	-	75	61.818	ENSPMGG00000016067	upf3b	54	66.892	Periophthalmus_magnuspinnatus
ENSBTAG00000047365	-	82	85.083	ENSPCIG00000019590	-	97	73.913	Phascolarctos_cinereus
ENSBTAG00000047365	-	88	66.332	ENSPLAG00000011960	upf3a	71	64.925	Poecilia_latipinna
ENSBTAG00000047365	-	70	68.627	ENSPREG00000005566	upf3a	83	68.627	Poecilia_reticulata
ENSBTAG00000047365	-	72	68.125	ENSPCOG00000021960	UPF3B	50	68.125	Propithecus_coquereli
ENSBTAG00000047365	-	74	65.854	ENSPNAG00000021528	upf3b	51	67.763	Pygocentrus_nattereri
ENSBTAG00000047365	-	95	79.904	ENSRNOG00000017397	Upf3a	51	78.947	Rattus_norvegicus
ENSBTAG00000047365	-	72	68.125	ENSRROG00000041031	UPF3B	70	70.667	Rhinopithecus_roxellana
ENSBTAG00000047365	-	72	68.125	ENSSBOG00000019740	UPF3B	71	71.141	Saimiri_boliviensis_boliviensis
ENSBTAG00000047365	-	66	79.310	ENSSMAG00000003858	upf3a	79	76.068	Scophthalmus_maximus
ENSBTAG00000047365	-	70	78.431	ENSSDUG00000009680	upf3a	85	67.114	Seriola_dumerili
ENSBTAG00000047365	-	71	77.564	ENSSPAG00000007938	upf3a	65	80.282	Stegastes_partitus
ENSBTAG00000047365	-	95	84.286	ENSSSCG00000024679	UPF3A	51	84.286	Sus_scrofa
ENSBTAG00000047365	-	72	67.722	ENSVVUG00000011594	UPF3B	70	70.667	Vulpes_vulpes
ENSBTAG00000047365	-	70	70.513	ENSXETG00000007440	upf3b	69	70.000	Xenopus_tropicalis
ENSBTAG00000047365	-	65	65.278	ENSXCOG00000016586	upf3b	74	68.468	Xiphophorus_couchianus