EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000047652 (Gene tree)
Gene ID: 617969
Gene Symbol: RBMXL2
Alias: HNRNPG-T|RBMX
Full Name: Bos taurus RBMX like 2 (RBMXL2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1562 bases
Position: chr15:45656005-45657566
Accession: NM_001046610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000056096	RBM1CTR	PF08081.11	6.6e-17	1	1
ENSBTAP00000056096	RRM_1	PF00076.22	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000066112	-	1562	-	ENSBTAP00000056096	396 (aa)	-	Q29RT0

Gene Model

Click here to download ENSBTAG00000047652's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000047652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000047652	RBMXL2	93	69.437	ENSBTAG00000013308	RBMX	96	65.274

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000047652	RBMXL2	95	78.892	ENSG00000170748	RBMXL2	97	76.104	Homo_sapiens
ENSBTAG00000047652	RBMXL2	95	79.211	ENSCJAG00000048010	-	97	74.352	Callithrix_jacchus
ENSBTAG00000047652	RBMXL2	100	79.302	ENSCAFG00020009888	-	97	78.497	Canis_lupus_dingo
ENSBTAG00000047652	RBMXL2	100	98.232	ENSCHIG00000005262	-	100	98.232	Capra_hircus
ENSBTAG00000047652	RBMXL2	94	77.309	ENSCCAG00000030849	-	98	75.477	Cebus_capucinus
ENSBTAG00000047652	RBMXL2	74	90.625	ENSCLAG00000016880	-	93	90.625	Chinchilla_lanigera
ENSBTAG00000047652	RBMXL2	94	80.800	ENSCSAG00000019334	RBMXL2	97	78.701	Chlorocebus_sabaeus
ENSBTAG00000047652	RBMXL2	99	74.811	ENSCSAG00000008478	-	96	74.151	Chlorocebus_sabaeus
ENSBTAG00000047652	RBMXL2	93	66.038	ENSCANG00000038625	-	59	65.079	Colobus_angolensis_palliatus
ENSBTAG00000047652	RBMXL2	100	82.872	ENSCGRG00001007681	Rbmxl2	97	78.796	Cricetulus_griseus_chok1gshd
ENSBTAG00000047652	RBMXL2	73	92.222	ENSDNOG00000011946	-	88	91.667	Dasypus_novemcinctus
ENSBTAG00000047652	RBMXL2	100	71.429	ENSETEG00000005619	-	97	68.586	Echinops_telfairi
ENSBTAG00000047652	RBMXL2	100	80.451	ENSFCAG00000042269	-	97	79.688	Felis_catus
ENSBTAG00000047652	RBMXL2	95	80.475	ENSGGOG00000006168	RBMXL2	97	77.403	Gorilla_gorilla
ENSBTAG00000047652	RBMXL2	95	73.740	ENSLAFG00000014037	-	96	69.291	Loxodonta_africana
ENSBTAG00000047652	RBMXL2	94	78.667	ENSMFAG00000037874	RBMXL2	97	77.922	Macaca_fascicularis
ENSBTAG00000047652	RBMXL2	96	63.514	ENSMFAG00000017591	-	54	65.217	Macaca_fascicularis
ENSBTAG00000047652	RBMXL2	94	80.053	ENSMMUG00000008588	RBMXL2	97	78.238	Macaca_mulatta
ENSBTAG00000047652	RBMXL2	94	78.191	ENSMNEG00000004729	RBMXL2	97	77.979	Macaca_nemestrina
ENSBTAG00000047652	RBMXL2	100	62.312	ENSMAUG00000021353	Rbmxl2	86	91.667	Mesocricetus_auratus
ENSBTAG00000047652	RBMXL2	100	82.116	MGP_CAROLIEiJ_G0030264	Rbmxl2	97	78.272	Mus_caroli
ENSBTAG00000047652	RBMXL2	100	82.620	ENSMUSG00000073894	Rbmxl2	97	78.534	Mus_musculus
ENSBTAG00000047652	RBMXL2	100	82.116	MGP_PahariEiJ_G0013481	Rbmxl2	97	78.010	Mus_pahari
ENSBTAG00000047652	RBMXL2	100	82.620	MGP_SPRETEiJ_G0031377	Rbmxl2	97	78.534	Mus_spretus
ENSBTAG00000047652	RBMXL2	75	84.422	ENSMPUG00000010430	-	93	89.655	Mustela_putorius_furo
ENSBTAG00000047652	RBMXL2	95	82.322	ENSNLEG00000018176	RBMXL2	97	77.403	Nomascus_leucogenys
ENSBTAG00000047652	RBMXL2	93	82.927	ENSOGAG00000024361	-	97	82.723	Otolemur_garnettii
ENSBTAG00000047652	RBMXL2	100	80.451	ENSPPRG00000021361	-	97	79.688	Panthera_pardus
ENSBTAG00000047652	RBMXL2	95	79.420	ENSPTRG00000003312	RBMXL2	97	76.623	Pan_troglodytes
ENSBTAG00000047652	RBMXL2	99	60.227	ENSPANG00000017967	-	53	62.222	Papio_anubis
ENSBTAG00000047652	RBMXL2	94	78.191	ENSPANG00000016324	RBMXL2	97	77.979	Papio_anubis
ENSBTAG00000047652	RBMXL2	85	56.868	ENSRROG00000035554	-	56	66.667	Rhinopithecus_roxellana
ENSBTAG00000047652	RBMXL2	59	80.814	ENSSARG00000012142	-	57	80.255	Sorex_araneus
ENSBTAG00000047652	RBMXL2	93	67.935	ENSSSCG00000035683	-	97	64.304	Sus_scrofa
ENSBTAG00000047652	RBMXL2	83	84.874	ENSTTRG00000003238	-	74	89.583	Tursiops_truncatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISS	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISS	Function
GO:0003682	chromatin binding	-	ISS	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005719	nuclear euchromatin	-	ISS	Component
GO:0006366	transcription by RNA polymerase II	-	ISS	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0006509	membrane protein ectodomain proteolysis	-	ISS	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0044530	supraspliceosomal complex	-	ISS	Component
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	ISS	Process
GO:0048026	positive regulation of mRNA splicing, via spliceosome	-	ISS	Process
GO:0051260	protein homooligomerization	-	ISS	Process
GO:0070062	extracellular exosome	-	ISS	Component
GO:0071013	catalytic step 2 spliceosome	-	ISS	Component
GO:0071347	cellular response to interleukin-1	-	ISS	Process