EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000048536 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1855 bases
Position: chr6:50560621-50562475
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070435	RRM_1	PF00076.22	7.5e-38	1	2
ENSBTAP00000070435	RRM_1	PF00076.22	7.5e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000074153	-	531	-	ENSBTAP00000070435	176 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000048536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000048536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000048536	-	98	86.826	ENSBTAG00000017125	PABPC4	56	86.826
ENSBTAG00000048536	-	90	32.749	ENSBTAG00000004080	TIAL1	69	32.500
ENSBTAG00000048536	-	88	74.026	ENSBTAG00000050902	-	73	74.026
ENSBTAG00000048536	-	98	62.338	ENSBTAG00000019942	PABPC5	89	62.338
ENSBTAG00000048536	-	88	31.875	ENSBTAG00000019182	TIA1	69	31.875
ENSBTAG00000048536	-	93	82.036	ENSBTAG00000046358	PABPC1	57	82.036
ENSBTAG00000048536	-	88	74.026	ENSBTAG00000052491	-	72	74.026
ENSBTAG00000048536	-	93	74.850	ENSBTAG00000055300	-	99	74.850
ENSBTAG00000048536	-	93	65.031	ENSBTAG00000046902	PABPC4L	94	65.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000048536	-	98	86.826	ENSG00000090621	PABPC4	99	93.694	Homo_sapiens
ENSBTAG00000048536	-	93	84.431	ENSAPOG00000001161	pabpc4	58	84.431	Acanthochromis_polyacanthus
ENSBTAG00000048536	-	98	87.425	ENSAMEG00000011535	-	55	87.425	Ailuropoda_melanoleuca
ENSBTAG00000048536	-	93	84.431	ENSACIG00000023343	pabpc4	57	84.431	Amphilophus_citrinellus
ENSBTAG00000048536	-	95	84.431	ENSAOCG00000021529	pabpc4	60	84.431	Amphiprion_ocellaris
ENSBTAG00000048536	-	93	84.431	ENSAPEG00000019196	pabpc4	58	84.431	Amphiprion_percula
ENSBTAG00000048536	-	93	84.431	ENSATEG00000007402	pabpc4	58	84.431	Anabas_testudineus
ENSBTAG00000048536	-	93	84.663	ENSAPLG00000009729	-	57	84.663	Anas_platyrhynchos
ENSBTAG00000048536	-	86	90.722	ENSACAG00000002544	PABPC4	52	90.722	Anolis_carolinensis
ENSBTAG00000048536	-	98	86.826	ENSANAG00000025079	PABPC4	57	86.826	Aotus_nancymaae
ENSBTAG00000048536	-	93	84.431	ENSACLG00000019558	pabpc4	58	84.431	Astatotilapia_calliptera
ENSBTAG00000048536	-	93	83.929	ENSAMXG00000018779	pabpc4	56	83.929	Astyanax_mexicanus
ENSBTAG00000048536	-	98	86.826	ENSCJAG00000002512	-	57	86.826	Callithrix_jacchus
ENSBTAG00000048536	-	92	93.269	ENSCAFG00000003081	PABPC4	57	86.826	Canis_familiaris
ENSBTAG00000048536	-	98	86.826	ENSCAFG00020004161	PABPC4	55	86.826	Canis_lupus_dingo
ENSBTAG00000048536	-	93	77.844	ENSCHIG00000023385	-	53	77.844	Capra_hircus
ENSBTAG00000048536	-	98	86.826	ENSCHIG00000019398	-	55	86.826	Capra_hircus
ENSBTAG00000048536	-	98	86.826	ENSTSYG00000006532	PABPC4	57	86.826	Carlito_syrichta
ENSBTAG00000048536	-	97	87.273	ENSCAPG00000015984	PABPC4	60	87.273	Cavia_aperea
ENSBTAG00000048536	-	93	86.826	ENSCPOG00000009552	PABPC4	59	86.826	Cavia_porcellus
ENSBTAG00000048536	-	98	86.826	ENSCCAG00000037306	PABPC4	57	86.826	Cebus_capucinus
ENSBTAG00000048536	-	98	86.826	ENSCATG00000042164	PABPC4	57	86.826	Cercocebus_atys
ENSBTAG00000048536	-	98	86.826	ENSCLAG00000011899	PABPC4	57	86.826	Chinchilla_lanigera
ENSBTAG00000048536	-	98	86.826	ENSCSAG00000001135	PABPC4	55	86.826	Chlorocebus_sabaeus
ENSBTAG00000048536	-	92	92.233	ENSCHOG00000005327	PABPC4	50	92.233	Choloepus_hoffmanni
ENSBTAG00000048536	-	93	85.030	ENSCPBG00000001038	PABPC4	57	85.030	Chrysemys_picta_bellii
ENSBTAG00000048536	-	93	90.909	ENSCANG00000034177	PABPC4	56	90.909	Colobus_angolensis_palliatus
ENSBTAG00000048536	-	93	86.826	ENSCGRG00001018166	Pabpc4	59	86.826	Cricetulus_griseus_chok1gshd
ENSBTAG00000048536	-	88	90.909	ENSCGRG00000009777	Pabpc4	57	90.909	Cricetulus_griseus_crigri
ENSBTAG00000048536	-	93	83.832	ENSCSEG00000000130	pabpc4	58	83.832	Cynoglossus_semilaevis
ENSBTAG00000048536	-	88	88.312	ENSCVAG00000019246	pabpc4	57	88.312	Cyprinodon_variegatus
ENSBTAG00000048536	-	93	83.929	ENSDARG00000059259	pabpc4	60	83.929	Danio_rerio
ENSBTAG00000048536	-	92	92.784	ENSDNOG00000018444	-	52	92.784	Dasypus_novemcinctus
ENSBTAG00000048536	-	93	86.826	ENSDORG00000011581	Pabpc4	56	86.826	Dipodomys_ordii
ENSBTAG00000048536	-	93	82.635	ENSEBUG00000000992	pabpc4	62	82.635	Eptatretus_burgeri
ENSBTAG00000048536	-	93	82.036	ENSEBUG00000013782	pabpc4	60	82.036	Eptatretus_burgeri
ENSBTAG00000048536	-	98	86.826	ENSEASG00005014119	PABPC4	55	86.826	Equus_asinus_asinus
ENSBTAG00000048536	-	98	86.826	ENSECAG00000009396	PABPC4	55	86.826	Equus_caballus
ENSBTAG00000048536	-	98	86.228	ENSEEUG00000002962	PABPC4	55	86.228	Erinaceus_europaeus
ENSBTAG00000048536	-	93	82.143	ENSELUG00000003195	pabpc4	57	82.143	Esox_lucius
ENSBTAG00000048536	-	98	86.826	ENSFCAG00000015254	-	57	86.826	Felis_catus
ENSBTAG00000048536	-	93	85.629	ENSFALG00000000543	PABPC4	58	85.629	Ficedula_albicollis
ENSBTAG00000048536	-	98	86.826	ENSFDAG00000020016	-	55	86.826	Fukomys_damarensis
ENSBTAG00000048536	-	93	84.431	ENSFHEG00000007548	pabpc4	61	84.431	Fundulus_heteroclitus
ENSBTAG00000048536	-	93	83.929	ENSGMOG00000019025	pabpc4	57	83.929	Gadus_morhua
ENSBTAG00000048536	-	90	86.503	ENSGALG00000003800	PABPC4	57	86.503	Gallus_gallus
ENSBTAG00000048536	-	93	83.832	ENSGAFG00000018195	pabpc4	81	87.662	Gambusia_affinis
ENSBTAG00000048536	-	93	84.431	ENSGACG00000007179	pabpc4	58	84.431	Gasterosteus_aculeatus
ENSBTAG00000048536	-	93	85.030	ENSGAGG00000001888	PABPC4	57	85.030	Gopherus_agassizii
ENSBTAG00000048536	-	98	86.826	ENSGGOG00000004002	PABPC4	57	86.826	Gorilla_gorilla
ENSBTAG00000048536	-	93	84.431	ENSHBUG00000020206	pabpc4	58	84.431	Haplochromis_burtoni
ENSBTAG00000048536	-	98	86.826	ENSHGLG00000011162	PABPC4	57	86.826	Heterocephalus_glaber_female
ENSBTAG00000048536	-	98	86.826	ENSHGLG00100001580	PABPC4	57	86.826	Heterocephalus_glaber_male
ENSBTAG00000048536	-	93	84.431	ENSHCOG00000012694	pabpc4	59	84.431	Hippocampus_comes
ENSBTAG00000048536	-	93	85.030	ENSIPUG00000016620	pabpc4	57	85.030	Ictalurus_punctatus
ENSBTAG00000048536	-	98	86.826	ENSSTOG00000010416	PABPC4	59	86.826	Ictidomys_tridecemlineatus
ENSBTAG00000048536	-	98	86.228	ENSJJAG00000007781	Pabpc4	56	86.228	Jaculus_jaculus
ENSBTAG00000048536	-	93	84.431	ENSKMAG00000013597	pabpc4	60	84.431	Kryptolebias_marmoratus
ENSBTAG00000048536	-	93	83.929	ENSLBEG00000013654	pabpc4	58	83.929	Labrus_bergylta
ENSBTAG00000048536	-	93	85.030	ENSLACG00000011907	PABPC4	57	85.030	Latimeria_chalumnae
ENSBTAG00000048536	-	93	84.524	ENSLOCG00000001877	pabpc4	57	84.524	Lepisosteus_oculatus
ENSBTAG00000048536	-	98	86.826	ENSLAFG00000000151	PABPC4	59	86.826	Loxodonta_africana
ENSBTAG00000048536	-	98	86.826	ENSMFAG00000041481	PABPC4	57	86.826	Macaca_fascicularis
ENSBTAG00000048536	-	98	86.826	ENSMMUG00000007497	PABPC4	55	86.826	Macaca_mulatta
ENSBTAG00000048536	-	98	86.826	ENSMNEG00000043054	PABPC4	57	86.826	Macaca_nemestrina
ENSBTAG00000048536	-	98	86.826	ENSMLEG00000040716	PABPC4	57	86.826	Mandrillus_leucophaeus
ENSBTAG00000048536	-	95	84.431	ENSMAMG00000010025	pabpc4	60	84.431	Mastacembelus_armatus
ENSBTAG00000048536	-	93	84.431	ENSMZEG00005006141	pabpc4	61	84.431	Maylandia_zebra
ENSBTAG00000048536	-	86	91.346	ENSMGAG00000005408	PABPC4	51	91.346	Meleagris_gallopavo
ENSBTAG00000048536	-	84	81.081	ENSMAUG00000004089	-	78	81.081	Mesocricetus_auratus
ENSBTAG00000048536	-	93	38.356	ENSMAUG00000019763	-	55	53.892	Mesocricetus_auratus
ENSBTAG00000048536	-	92	70.103	ENSMICG00000036729	-	55	70.103	Microcebus_murinus
ENSBTAG00000048536	-	98	86.826	ENSMICG00000016633	-	66	86.826	Microcebus_murinus
ENSBTAG00000048536	-	93	86.826	ENSMOCG00000006763	Pabpc4	58	86.826	Microtus_ochrogaster
ENSBTAG00000048536	-	93	84.431	ENSMMOG00000002363	pabpc4	59	84.431	Mola_mola
ENSBTAG00000048536	-	88	42.331	ENSMODG00000019847	-	51	42.331	Monodelphis_domestica
ENSBTAG00000048536	-	89	70.701	ENSMODG00000018051	-	88	70.701	Monodelphis_domestica
ENSBTAG00000048536	-	93	85.629	ENSMODG00000017657	-	55	85.629	Monodelphis_domestica
ENSBTAG00000048536	-	93	84.431	ENSMALG00000011017	pabpc4	58	84.431	Monopterus_albus
ENSBTAG00000048536	-	92	91.753	MGP_CAROLIEiJ_G0024864	-	52	91.753	Mus_caroli
ENSBTAG00000048536	-	91	86.061	MGP_CAROLIEiJ_G0026435	-	100	91.489	Mus_caroli
ENSBTAG00000048536	-	93	86.228	ENSMUSG00000011257	Pabpc4	99	86.228	Mus_musculus
ENSBTAG00000048536	-	88	90.909	MGP_PahariEiJ_G0028765	Pabpc4	100	92.199	Mus_pahari
ENSBTAG00000048536	-	88	90.260	MGP_SPRETEiJ_G0027415	Pabpc4	100	91.489	Mus_spretus
ENSBTAG00000048536	-	98	86.826	ENSMPUG00000014414	-	55	86.826	Mustela_putorius_furo
ENSBTAG00000048536	-	98	86.826	ENSMLUG00000012068	PABPC4	59	86.826	Myotis_lucifugus
ENSBTAG00000048536	-	98	86.826	ENSNGAG00000018292	Pabpc4	59	86.826	Nannospalax_galili
ENSBTAG00000048536	-	88	88.312	ENSNBRG00000009708	pabpc4	95	88.312	Neolamprologus_brichardi
ENSBTAG00000048536	-	98	86.826	ENSNLEG00000011928	PABPC4	57	86.826	Nomascus_leucogenys
ENSBTAG00000048536	-	98	86.826	ENSOPRG00000011984	PABPC4	58	86.826	Ochotona_princeps
ENSBTAG00000048536	-	98	86.826	ENSODEG00000006592	-	58	86.826	Octodon_degus
ENSBTAG00000048536	-	77	77.778	ENSODEG00000013457	-	96	77.778	Octodon_degus
ENSBTAG00000048536	-	93	84.431	ENSONIG00000008176	pabpc4	58	84.431	Oreochromis_niloticus
ENSBTAG00000048536	-	91	85.455	ENSOANG00000010001	PABPC4	57	85.455	Ornithorhynchus_anatinus
ENSBTAG00000048536	-	98	86.826	ENSOCUG00000000562	PABPC4	51	86.826	Oryctolagus_cuniculus
ENSBTAG00000048536	-	93	84.431	ENSORLG00000017479	pabpc4	62	84.431	Oryzias_latipes
ENSBTAG00000048536	-	93	84.431	ENSORLG00020018644	pabpc4	62	84.431	Oryzias_latipes_hni
ENSBTAG00000048536	-	93	84.431	ENSORLG00015015042	pabpc4	62	84.431	Oryzias_latipes_hsok
ENSBTAG00000048536	-	93	84.431	ENSOMEG00000014410	pabpc4	60	84.431	Oryzias_melastigma
ENSBTAG00000048536	-	98	86.826	ENSOGAG00000004067	PABPC4	56	86.826	Otolemur_garnettii
ENSBTAG00000048536	-	98	86.826	ENSOARG00000020060	PABPC4	55	86.826	Ovis_aries
ENSBTAG00000048536	-	98	86.826	ENSPPAG00000043625	PABPC4	57	86.826	Pan_paniscus
ENSBTAG00000048536	-	98	86.826	ENSPPRG00000024727	PABPC4	57	86.826	Panthera_pardus
ENSBTAG00000048536	-	98	86.826	ENSPTIG00000005829	PABPC4	57	86.826	Panthera_tigris_altaica
ENSBTAG00000048536	-	98	86.826	ENSPTRG00000000573	PABPC4	57	86.826	Pan_troglodytes
ENSBTAG00000048536	-	98	86.826	ENSPANG00000009484	PABPC4	57	86.826	Papio_anubis
ENSBTAG00000048536	-	93	83.929	ENSPKIG00000025356	pabpc4	59	83.929	Paramormyrops_kingsleyae
ENSBTAG00000048536	-	93	85.030	ENSPSIG00000016892	PABPC4	57	85.030	Pelodiscus_sinensis
ENSBTAG00000048536	-	93	84.431	ENSPMGG00000009073	pabpc4	60	84.431	Periophthalmus_magnuspinnatus
ENSBTAG00000048536	-	93	86.826	ENSPEMG00000023569	-	57	86.826	Peromyscus_maniculatus_bairdii
ENSBTAG00000048536	-	91	86.667	ENSPEMG00000024193	-	51	86.667	Peromyscus_maniculatus_bairdii
ENSBTAG00000048536	-	93	83.636	ENSPMAG00000002836	pabpc4	64	83.636	Petromyzon_marinus
ENSBTAG00000048536	-	93	85.629	ENSPCIG00000020674	PABPC4	65	90.909	Phascolarctos_cinereus
ENSBTAG00000048536	-	93	83.832	ENSPFOG00000002682	pabpc4	58	83.832	Poecilia_formosa
ENSBTAG00000048536	-	93	83.832	ENSPLAG00000010112	pabpc4	58	83.832	Poecilia_latipinna
ENSBTAG00000048536	-	93	83.832	ENSPMEG00000019739	pabpc4	58	83.832	Poecilia_mexicana
ENSBTAG00000048536	-	93	83.832	ENSPREG00000001589	pabpc4	58	83.832	Poecilia_reticulata
ENSBTAG00000048536	-	98	86.826	ENSPPYG00000001506	PABPC4	55	86.826	Pongo_abelii
ENSBTAG00000048536	-	92	83.824	ENSPCOG00000025882	-	53	57.353	Propithecus_coquereli
ENSBTAG00000048536	-	98	86.826	ENSPCOG00000023725	-	57	86.826	Propithecus_coquereli
ENSBTAG00000048536	-	86	93.204	ENSPVAG00000002187	PABPC4	50	93.204	Pteropus_vampyrus
ENSBTAG00000048536	-	93	84.431	ENSPNYG00000006134	pabpc4	58	84.431	Pundamilia_nyererei
ENSBTAG00000048536	-	93	83.333	ENSPNAG00000024355	pabpc4	58	83.333	Pygocentrus_nattereri
ENSBTAG00000048536	-	93	86.228	ENSRNOG00000015642	Pabpc4	56	86.228	Rattus_norvegicus
ENSBTAG00000048536	-	93	83.234	ENSRNOG00000028592	AABR07035074.1	56	83.234	Rattus_norvegicus
ENSBTAG00000048536	-	98	86.826	ENSRBIG00000039761	PABPC4	57	86.826	Rhinopithecus_bieti
ENSBTAG00000048536	-	98	86.826	ENSRROG00000033355	PABPC4	57	86.826	Rhinopithecus_roxellana
ENSBTAG00000048536	-	98	86.826	ENSSBOG00000026193	PABPC4	57	86.826	Saimiri_boliviensis_boliviensis
ENSBTAG00000048536	-	93	85.629	ENSSHAG00000018139	PABPC4	57	85.629	Sarcophilus_harrisii
ENSBTAG00000048536	-	86	89.510	ENSSFOG00015023514	pabpc4	55	89.510	Scleropages_formosus
ENSBTAG00000048536	-	93	84.431	ENSSMAG00000009007	pabpc4	58	84.431	Scophthalmus_maximus
ENSBTAG00000048536	-	93	84.431	ENSSDUG00000012683	pabpc4	63	84.431	Seriola_dumerili
ENSBTAG00000048536	-	93	84.431	ENSSLDG00000013025	pabpc4	62	84.431	Seriola_lalandi_dorsalis
ENSBTAG00000048536	-	88	70.968	ENSSARG00000000310	PABPC4	51	70.968	Sorex_araneus
ENSBTAG00000048536	-	93	84.431	ENSSPUG00000003204	PABPC4	58	84.431	Sphenodon_punctatus
ENSBTAG00000048536	-	93	84.431	ENSSPAG00000009252	pabpc4	63	84.431	Stegastes_partitus
ENSBTAG00000048536	-	98	86.826	ENSSSCG00000003660	-	57	86.826	Sus_scrofa
ENSBTAG00000048536	-	93	85.629	ENSTGUG00000001266	PABPC4	55	85.629	Taeniopygia_guttata
ENSBTAG00000048536	-	95	83.234	ENSTRUG00000005907	pabpc4	58	83.234	Takifugu_rubripes
ENSBTAG00000048536	-	95	83.234	ENSTNIG00000016902	pabpc4	58	83.234	Tetraodon_nigroviridis
ENSBTAG00000048536	-	98	86.826	ENSUAMG00000000303	PABPC4	57	86.826	Ursus_americanus
ENSBTAG00000048536	-	98	86.826	ENSUMAG00000019585	PABPC4	68	86.826	Ursus_maritimus
ENSBTAG00000048536	-	98	48.503	ENSVPAG00000010041	PABPC4	51	48.503	Vicugna_pacos
ENSBTAG00000048536	-	98	86.826	ENSVVUG00000005215	PABPC4	57	86.826	Vulpes_vulpes
ENSBTAG00000048536	-	93	75.449	ENSXETG00000010946	pabpc4	58	75.449	Xenopus_tropicalis
ENSBTAG00000048536	-	93	84.431	ENSXETG00000027221	-	99	84.431	Xenopus_tropicalis
ENSBTAG00000048536	-	86	89.423	ENSXCOG00000013190	pabpc4	58	89.423	Xiphophorus_couchianus
ENSBTAG00000048536	-	93	83.832	ENSXMAG00000019007	pabpc4	58	83.832	Xiphophorus_maculatus