EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000048800 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 9649 bases
Position: chr18:55604256-55613904
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059066	RRM_1	PF00076.22	1.7e-13	1	1
ENSBTAP00000059066	U1snRNP70_N	PF12220.8	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000080842	-	1967	-	ENSBTAP00000059066	166 (aa)	-	UPI000000411A

Gene Model

Click here to download ENSBTAG00000048800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000048800's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000048800	-	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSBTAG00000048800	-	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSBTAG00000048800	-	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSBTAG00000048800	-	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSBTAG00000048800	-	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSBTAG00000048800	-	100	95.833	ENSCAFG00020025470	SNRNP70	100	95.833	Canis_lupus_dingo
ENSBTAG00000048800	-	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSBTAG00000048800	-	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSBTAG00000048800	-	99	97.561	ENSCANG00000036607	SNRNP70	66	97.561	Colobus_angolensis_palliatus
ENSBTAG00000048800	-	99	88.415	ENSCSEG00000011978	snrnp70	73	88.415	Cynoglossus_semilaevis
ENSBTAG00000048800	-	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSBTAG00000048800	-	99	86.585	ENSDARG00000077126	snrnp70	99	88.125	Danio_rerio
ENSBTAG00000048800	-	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSBTAG00000048800	-	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSBTAG00000048800	-	99	87.805	ENSGMOG00000011492	snrnp70	72	87.805	Gadus_morhua
ENSBTAG00000048800	-	99	88.415	ENSGACG00000000448	snrnp70	52	88.415	Gasterosteus_aculeatus
ENSBTAG00000048800	-	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSBTAG00000048800	-	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSBTAG00000048800	-	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSBTAG00000048800	-	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSBTAG00000048800	-	99	97.561	ENSLAFG00000028536	SNRNP70	71	97.561	Loxodonta_africana
ENSBTAG00000048800	-	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSBTAG00000048800	-	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSBTAG00000048800	-	99	97.561	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSBTAG00000048800	-	99	97.561	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSBTAG00000048800	-	99	97.561	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSBTAG00000048800	-	99	97.561	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSBTAG00000048800	-	99	89.024	ENSNBRG00000003126	snrnp70	70	89.024	Neolamprologus_brichardi
ENSBTAG00000048800	-	95	97.468	ENSNLEG00000004899	SNRNP70	63	97.468	Nomascus_leucogenys
ENSBTAG00000048800	-	99	96.951	ENSOANG00000005213	SNRNP70	72	96.951	Ornithorhynchus_anatinus
ENSBTAG00000048800	-	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSBTAG00000048800	-	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSBTAG00000048800	-	96	80.503	ENSPKIG00000019992	snrnp70	84	80.503	Paramormyrops_kingsleyae
ENSBTAG00000048800	-	98	96.296	ENSPSIG00000015251	SNRNP70	65	96.296	Pelodiscus_sinensis
ENSBTAG00000048800	-	96	90.566	ENSPMGG00000010153	snrnp70	76	90.566	Periophthalmus_magnuspinnatus
ENSBTAG00000048800	-	99	79.878	ENSPMAG00000008502	snrnp70	85	79.878	Petromyzon_marinus
ENSBTAG00000048800	-	99	85.976	ENSPCOG00000023103	SNRNP70	57	85.976	Propithecus_coquereli
ENSBTAG00000048800	-	99	97.561	ENSRBIG00000042387	SNRNP70	61	97.561	Rhinopithecus_bieti
ENSBTAG00000048800	-	99	97.561	ENSRROG00000033636	SNRNP70	61	97.561	Rhinopithecus_roxellana
ENSBTAG00000048800	-	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000048800	-	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSBTAG00000048800	-	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSBTAG00000048800	-	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSBTAG00000048800	-	79	99.237	ENSVPAG00000005959	-	59	99.237	Vicugna_pacos
ENSBTAG00000048800	-	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes