EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000049128 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 378 bases
Position: chr15:63330758-63331135
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000072021	RRM_1	PF00076.22	6.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000070248	-	378	-	ENSBTAP00000072021	125 (aa)	-	UPI00004F2383

Gene Model

Click here to download ENSBTAG00000049128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000049128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000049128	-	100	98.400	ENSBTAG00000003407	SF3B6	100	98.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000049128	-	100	98.400	ENSG00000115128	SF3B6	100	98.400	Homo_sapiens
ENSBTAG00000049128	-	100	96.800	ENSAPOG00000023788	sf3b6	100	96.800	Acanthochromis_polyacanthus
ENSBTAG00000049128	-	100	98.400	ENSAMEG00000002786	SF3B6	100	98.400	Ailuropoda_melanoleuca
ENSBTAG00000049128	-	100	96.800	ENSACIG00000012608	sf3b6	100	96.800	Amphilophus_citrinellus
ENSBTAG00000049128	-	100	96.800	ENSAOCG00000013394	sf3b6	100	96.800	Amphiprion_ocellaris
ENSBTAG00000049128	-	100	96.800	ENSAPEG00000015311	sf3b6	100	96.800	Amphiprion_percula
ENSBTAG00000049128	-	100	96.800	ENSATEG00000016569	sf3b6	100	96.800	Anabas_testudineus
ENSBTAG00000049128	-	100	98.400	ENSACAG00000011677	SF3B6	100	98.400	Anolis_carolinensis
ENSBTAG00000049128	-	100	98.400	ENSANAG00000027284	SF3B6	95	98.400	Aotus_nancymaae
ENSBTAG00000049128	-	100	96.800	ENSACLG00000007793	sf3b6	100	96.800	Astatotilapia_calliptera
ENSBTAG00000049128	-	100	98.400	ENSAMXG00000034888	sf3b6	100	98.400	Astyanax_mexicanus
ENSBTAG00000049128	-	100	66.400	WBGene00016808	C50D2.5	91	66.400	Caenorhabditis_elegans
ENSBTAG00000049128	-	100	98.400	ENSCJAG00000007716	SF3B6	100	98.400	Callithrix_jacchus
ENSBTAG00000049128	-	100	98.400	ENSCAFG00000003957	SF3B6	100	98.400	Canis_familiaris
ENSBTAG00000049128	-	100	98.400	ENSCAFG00020025576	SF3B6	100	98.400	Canis_lupus_dingo
ENSBTAG00000049128	-	100	98.400	ENSCHIG00000009902	SF3B6	100	98.400	Capra_hircus
ENSBTAG00000049128	-	100	98.400	ENSTSYG00000013978	SF3B6	100	98.400	Carlito_syrichta
ENSBTAG00000049128	-	97	95.041	ENSCAPG00000016302	SF3B6	99	95.041	Cavia_aperea
ENSBTAG00000049128	-	100	98.400	ENSCPOG00000008016	SF3B6	100	98.400	Cavia_porcellus
ENSBTAG00000049128	-	100	98.400	ENSCCAG00000036653	SF3B6	100	98.400	Cebus_capucinus
ENSBTAG00000049128	-	99	92.742	ENSCCAG00000018894	-	96	92.742	Cebus_capucinus
ENSBTAG00000049128	-	100	98.400	ENSCATG00000030936	SF3B6	100	98.400	Cercocebus_atys
ENSBTAG00000049128	-	100	98.400	ENSCLAG00000014512	SF3B6	100	98.400	Chinchilla_lanigera
ENSBTAG00000049128	-	100	98.400	ENSCSAG00000008390	SF3B6	100	98.400	Chlorocebus_sabaeus
ENSBTAG00000049128	-	100	98.400	ENSCHOG00000000689	SF3B6	100	98.400	Choloepus_hoffmanni
ENSBTAG00000049128	-	99	73.387	ENSCHOG00000013886	-	99	73.387	Choloepus_hoffmanni
ENSBTAG00000049128	-	100	98.400	ENSCPBG00000020042	SF3B6	100	98.400	Chrysemys_picta_bellii
ENSBTAG00000049128	-	98	78.862	ENSCING00000012689	-	97	78.862	Ciona_intestinalis
ENSBTAG00000049128	-	100	98.400	ENSCANG00000030559	SF3B6	100	98.400	Colobus_angolensis_palliatus
ENSBTAG00000049128	-	100	98.400	ENSCGRG00001014595	Sf3b6	100	98.400	Cricetulus_griseus_chok1gshd
ENSBTAG00000049128	-	100	98.400	ENSCGRG00000005272	Sf3b6	100	98.400	Cricetulus_griseus_crigri
ENSBTAG00000049128	-	100	96.000	ENSCSEG00000019017	sf3b6	100	96.000	Cynoglossus_semilaevis
ENSBTAG00000049128	-	100	97.600	ENSCVAG00000005055	sf3b6	100	97.600	Cyprinodon_variegatus
ENSBTAG00000049128	-	100	98.400	ENSDARG00000009753	sf3b6	100	98.400	Danio_rerio
ENSBTAG00000049128	-	100	98.400	ENSDNOG00000007148	SF3B6	100	98.400	Dasypus_novemcinctus
ENSBTAG00000049128	-	99	81.746	ENSDORG00000027390	-	98	81.746	Dipodomys_ordii
ENSBTAG00000049128	-	100	98.400	ENSDORG00000009772	Sf3b6	100	98.400	Dipodomys_ordii
ENSBTAG00000049128	-	99	81.746	ENSDORG00000029761	-	98	81.746	Dipodomys_ordii
ENSBTAG00000049128	-	92	75.652	FBgn0035692	Sf3b6	95	75.652	Drosophila_melanogaster
ENSBTAG00000049128	-	92	90.435	ENSEBUG00000004424	sf3b6	91	90.435	Eptatretus_burgeri
ENSBTAG00000049128	-	100	98.400	ENSEASG00005009993	SF3B6	100	98.400	Equus_asinus_asinus
ENSBTAG00000049128	-	100	87.200	ENSEASG00005008061	-	100	87.200	Equus_asinus_asinus
ENSBTAG00000049128	-	79	84.848	ENSECAG00000027755	-	85	84.848	Equus_caballus
ENSBTAG00000049128	-	81	94.059	ENSECAG00000015618	SF3B6	93	94.059	Equus_caballus
ENSBTAG00000049128	-	100	96.800	ENSELUG00000010379	sf3b6	100	96.800	Esox_lucius
ENSBTAG00000049128	-	100	98.400	ENSFCAG00000031365	SF3B6	100	98.400	Felis_catus
ENSBTAG00000049128	-	100	98.400	ENSFALG00000001651	SF3B6	100	98.400	Ficedula_albicollis
ENSBTAG00000049128	-	100	98.400	ENSFDAG00000007864	SF3B6	100	98.400	Fukomys_damarensis
ENSBTAG00000049128	-	100	97.600	ENSFHEG00000000685	sf3b6	100	97.600	Fundulus_heteroclitus
ENSBTAG00000049128	-	100	96.000	ENSGMOG00000005123	sf3b6	100	96.000	Gadus_morhua
ENSBTAG00000049128	-	73	98.901	ENSGALG00000016501	SF3B6	100	98.901	Gallus_gallus
ENSBTAG00000049128	-	100	96.800	ENSGAFG00000009334	sf3b6	100	96.800	Gambusia_affinis
ENSBTAG00000049128	-	100	96.000	ENSGACG00000004803	sf3b6	100	96.000	Gasterosteus_aculeatus
ENSBTAG00000049128	-	100	98.400	ENSGAGG00000012240	SF3B6	100	98.400	Gopherus_agassizii
ENSBTAG00000049128	-	100	98.400	ENSGGOG00000040806	SF3B6	100	98.400	Gorilla_gorilla
ENSBTAG00000049128	-	100	96.800	ENSHBUG00000012556	sf3b6	100	96.800	Haplochromis_burtoni
ENSBTAG00000049128	-	100	98.400	ENSHGLG00000014895	SF3B14	100	98.400	Heterocephalus_glaber_female
ENSBTAG00000049128	-	100	98.400	ENSHGLG00100008639	SF3B14	100	98.400	Heterocephalus_glaber_male
ENSBTAG00000049128	-	100	97.600	ENSHCOG00000019962	sf3b6	100	97.600	Hippocampus_comes
ENSBTAG00000049128	-	100	98.400	ENSIPUG00000023800	sf3b6	100	98.400	Ictalurus_punctatus
ENSBTAG00000049128	-	100	98.400	ENSJJAG00000021819	Sf3b6	100	98.400	Jaculus_jaculus
ENSBTAG00000049128	-	100	96.800	ENSKMAG00000004000	sf3b6	100	96.800	Kryptolebias_marmoratus
ENSBTAG00000049128	-	100	96.800	ENSLBEG00000022937	sf3b6	100	96.800	Labrus_bergylta
ENSBTAG00000049128	-	100	98.400	ENSLACG00000014326	SF3B6	100	98.400	Latimeria_chalumnae
ENSBTAG00000049128	-	100	98.400	ENSLOCG00000016481	sf3b6	100	98.400	Lepisosteus_oculatus
ENSBTAG00000049128	-	100	98.400	ENSLAFG00000029423	SF3B6	100	98.400	Loxodonta_africana
ENSBTAG00000049128	-	100	98.400	ENSMFAG00000038178	SF3B6	100	98.400	Macaca_fascicularis
ENSBTAG00000049128	-	100	98.400	ENSMMUG00000001282	SF3B6	100	98.400	Macaca_mulatta
ENSBTAG00000049128	-	100	98.400	ENSMNEG00000029050	SF3B6	100	98.400	Macaca_nemestrina
ENSBTAG00000049128	-	100	98.400	ENSMLEG00000019896	SF3B6	100	98.400	Mandrillus_leucophaeus
ENSBTAG00000049128	-	78	94.845	ENSMAMG00000007713	sf3b6	88	94.845	Mastacembelus_armatus
ENSBTAG00000049128	-	100	96.800	ENSMZEG00005003557	sf3b6	100	96.800	Maylandia_zebra
ENSBTAG00000049128	-	100	98.400	ENSMGAG00000014057	SF3B6	100	98.400	Meleagris_gallopavo
ENSBTAG00000049128	-	100	98.400	ENSMAUG00000000586	-	100	98.400	Mesocricetus_auratus
ENSBTAG00000049128	-	100	98.400	ENSMICG00000032874	SF3B6	100	98.400	Microcebus_murinus
ENSBTAG00000049128	-	100	98.400	ENSMOCG00000014338	Sf3b6	100	98.400	Microtus_ochrogaster
ENSBTAG00000049128	-	100	97.600	ENSMMOG00000015653	sf3b6	100	97.600	Mola_mola
ENSBTAG00000049128	-	100	91.200	ENSMODG00000002144	SF3B6	100	91.200	Monodelphis_domestica
ENSBTAG00000049128	-	100	97.600	ENSMALG00000019642	sf3b6	67	97.600	Monopterus_albus
ENSBTAG00000049128	-	100	98.400	MGP_CAROLIEiJ_G0017590	Sf3b6	100	98.400	Mus_caroli
ENSBTAG00000049128	-	100	98.400	ENSMUSG00000037361	Sf3b6	100	98.400	Mus_musculus
ENSBTAG00000049128	-	100	98.400	MGP_PahariEiJ_G0029348	Sf3b6	100	98.400	Mus_pahari
ENSBTAG00000049128	-	100	98.400	MGP_SPRETEiJ_G0018434	Sf3b6	100	98.400	Mus_spretus
ENSBTAG00000049128	-	100	98.400	ENSMPUG00000013957	SF3B6	100	98.400	Mustela_putorius_furo
ENSBTAG00000049128	-	100	96.800	ENSMLUG00000002473	SF3B6	100	96.800	Myotis_lucifugus
ENSBTAG00000049128	-	100	98.400	ENSNGAG00000020256	Sf3b6	100	98.400	Nannospalax_galili
ENSBTAG00000049128	-	100	96.800	ENSNBRG00000018244	sf3b6	100	96.800	Neolamprologus_brichardi
ENSBTAG00000049128	-	100	98.400	ENSNLEG00000000815	-	100	98.400	Nomascus_leucogenys
ENSBTAG00000049128	-	87	98.165	ENSODEG00000009547	SF3B6	92	98.165	Octodon_degus
ENSBTAG00000049128	-	100	96.800	ENSONIG00000001219	sf3b6	100	96.800	Oreochromis_niloticus
ENSBTAG00000049128	-	100	98.400	ENSOANG00000007627	SF3B6	100	98.400	Ornithorhynchus_anatinus
ENSBTAG00000049128	-	100	98.400	ENSOCUG00000022008	SF3B6	100	98.400	Oryctolagus_cuniculus
ENSBTAG00000049128	-	100	96.800	ENSORLG00000015955	sf3b6	100	96.800	Oryzias_latipes
ENSBTAG00000049128	-	100	96.800	ENSORLG00020005875	sf3b6	100	96.800	Oryzias_latipes_hni
ENSBTAG00000049128	-	100	96.800	ENSORLG00015001347	sf3b6	100	96.800	Oryzias_latipes_hsok
ENSBTAG00000049128	-	100	96.800	ENSOMEG00000014506	sf3b6	100	96.800	Oryzias_melastigma
ENSBTAG00000049128	-	100	98.400	ENSOGAG00000004468	SF3B6	100	98.400	Otolemur_garnettii
ENSBTAG00000049128	-	100	98.400	ENSOARG00000017819	SF3B6	100	98.400	Ovis_aries
ENSBTAG00000049128	-	100	98.400	ENSPPAG00000027816	SF3B6	100	98.400	Pan_paniscus
ENSBTAG00000049128	-	100	98.400	ENSPPRG00000023257	SF3B6	100	98.400	Panthera_pardus
ENSBTAG00000049128	-	100	98.400	ENSPTIG00000013322	SF3B6	100	98.400	Panthera_tigris_altaica
ENSBTAG00000049128	-	100	98.400	ENSPTRG00000011709	SF3B6	100	98.400	Pan_troglodytes
ENSBTAG00000049128	-	100	98.400	ENSPANG00000021963	SF3B6	100	98.400	Papio_anubis
ENSBTAG00000049128	-	100	98.400	ENSPKIG00000012311	sf3b6	100	98.400	Paramormyrops_kingsleyae
ENSBTAG00000049128	-	92	98.261	ENSPSIG00000017115	SF3B6	100	98.261	Pelodiscus_sinensis
ENSBTAG00000049128	-	78	94.845	ENSPMGG00000014621	sf3b6	81	94.845	Periophthalmus_magnuspinnatus
ENSBTAG00000049128	-	100	98.400	ENSPEMG00000010308	Sf3b6	100	98.400	Peromyscus_maniculatus_bairdii
ENSBTAG00000049128	-	94	86.441	ENSPMAG00000006008	sf3b6	94	86.441	Petromyzon_marinus
ENSBTAG00000049128	-	100	98.400	ENSPCIG00000022128	-	100	98.400	Phascolarctos_cinereus
ENSBTAG00000049128	-	99	76.613	ENSPCIG00000015858	-	99	76.613	Phascolarctos_cinereus
ENSBTAG00000049128	-	100	96.800	ENSPFOG00000012494	sf3b6	100	96.800	Poecilia_formosa
ENSBTAG00000049128	-	100	96.800	ENSPLAG00000020460	sf3b6	100	96.800	Poecilia_latipinna
ENSBTAG00000049128	-	100	96.800	ENSPMEG00000004426	sf3b6	100	96.800	Poecilia_mexicana
ENSBTAG00000049128	-	100	98.400	ENSPPYG00000012603	SF3B6	100	98.400	Pongo_abelii
ENSBTAG00000049128	-	100	98.400	ENSPVAG00000011346	SF3B6	100	98.400	Pteropus_vampyrus
ENSBTAG00000049128	-	100	96.800	ENSPNYG00000021832	sf3b6	100	96.800	Pundamilia_nyererei
ENSBTAG00000049128	-	100	98.400	ENSPNAG00000008845	sf3b6	100	98.400	Pygocentrus_nattereri
ENSBTAG00000049128	-	100	83.200	ENSRNOG00000046172	Sf3b6	100	83.200	Rattus_norvegicus
ENSBTAG00000049128	-	100	98.400	ENSRBIG00000039598	SF3B6	100	98.400	Rhinopithecus_bieti
ENSBTAG00000049128	-	100	98.400	ENSRROG00000011368	SF3B6	100	98.400	Rhinopithecus_roxellana
ENSBTAG00000049128	-	100	98.400	ENSSBOG00000002914	SF3B6	100	98.400	Saimiri_boliviensis_boliviensis
ENSBTAG00000049128	-	100	98.400	ENSSFOG00015014370	sf3b6	100	98.400	Scleropages_formosus
ENSBTAG00000049128	-	100	96.800	ENSSMAG00000004566	sf3b6	100	96.800	Scophthalmus_maximus
ENSBTAG00000049128	-	100	96.800	ENSSDUG00000006538	sf3b6	100	96.800	Seriola_dumerili
ENSBTAG00000049128	-	100	96.800	ENSSLDG00000004494	sf3b6	100	96.800	Seriola_lalandi_dorsalis
ENSBTAG00000049128	-	100	98.400	ENSSARG00000011902	-	100	98.400	Sorex_araneus
ENSBTAG00000049128	-	100	98.400	ENSSPUG00000014919	SF3B6	100	98.400	Sphenodon_punctatus
ENSBTAG00000049128	-	100	96.800	ENSSPAG00000013201	sf3b6	100	96.800	Stegastes_partitus
ENSBTAG00000049128	-	100	98.400	ENSSSCG00000008587	SF3B6	100	98.400	Sus_scrofa
ENSBTAG00000049128	-	100	98.400	ENSTGUG00000013191	SF3B6	100	98.400	Taeniopygia_guttata
ENSBTAG00000049128	-	100	96.800	ENSTRUG00000025286	sf3b6	100	96.800	Takifugu_rubripes
ENSBTAG00000049128	-	100	96.800	ENSTNIG00000009719	sf3b6	100	96.800	Tetraodon_nigroviridis
ENSBTAG00000049128	-	92	98.261	ENSTBEG00000012532	SF3B6	100	98.261	Tupaia_belangeri
ENSBTAG00000049128	-	92	98.261	ENSTTRG00000013430	SF3B6	100	98.261	Tursiops_truncatus
ENSBTAG00000049128	-	100	98.400	ENSUAMG00000025329	SF3B6	100	98.400	Ursus_americanus
ENSBTAG00000049128	-	100	80.952	ENSUAMG00000000978	-	100	80.952	Ursus_americanus
ENSBTAG00000049128	-	100	98.400	ENSUMAG00000022835	SF3B6	100	98.400	Ursus_maritimus
ENSBTAG00000049128	-	92	98.261	ENSVPAG00000005546	SF3B6	100	98.261	Vicugna_pacos
ENSBTAG00000049128	-	100	98.400	ENSVVUG00000010874	SF3B6	100	98.400	Vulpes_vulpes
ENSBTAG00000049128	-	100	97.600	ENSXETG00000018204	sf3b6	100	97.600	Xenopus_tropicalis
ENSBTAG00000049128	-	86	84.071	ENSXCOG00000008477	sf3b6	88	84.071	Xiphophorus_couchianus
ENSBTAG00000049128	-	100	96.800	ENSXMAG00000010747	sf3b6	100	96.800	Xiphophorus_maculatus