EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000049339 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 4779 bases
Position: chr7:13155946-13160724
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	1	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	2	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	3	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	4	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	5	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	6	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	7	8
ENSBTAP00000060016	zf-C2H2	PF00096.26	2.5e-41	8	8
ENSBTAP00000060016	zf-met	PF12874.7	1.8e-07	1	2
ENSBTAP00000060016	zf-met	PF12874.7	1.8e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000070879	-	4403	-	ENSBTAP00000060016	356 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000049339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000049339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000049339	-	80	36.879	ENSBTAG00000013227	SNAI2	54	36.879
ENSBTAG00000049339	-	81	48.000	ENSBTAG00000050093	-	50	48.000
ENSBTAG00000049339	-	89	49.129	ENSBTAG00000008902	ZNF345	94	49.129
ENSBTAG00000049339	-	81	46.341	ENSBTAG00000049610	ZNF234	84	46.341
ENSBTAG00000049339	-	81	42.373	ENSBTAG00000043974	-	51	40.136
ENSBTAG00000049339	-	81	33.663	ENSBTAG00000012333	ZNF524	96	35.870
ENSBTAG00000049339	-	81	43.726	ENSBTAG00000040358	-	100	43.726
ENSBTAG00000049339	-	93	40.418	ENSBTAG00000053591	-	98	42.857
ENSBTAG00000049339	-	81	40.559	ENSBTAG00000045531	-	50	39.456
ENSBTAG00000049339	-	91	46.154	ENSBTAG00000017517	ZNF236	62	46.154
ENSBTAG00000049339	-	84	37.725	ENSBTAG00000005478	PATZ1	51	37.725
ENSBTAG00000049339	-	96	38.889	ENSBTAG00000038322	-	76	38.889
ENSBTAG00000049339	-	81	37.762	ENSBTAG00000038869	ZNF383	81	39.600
ENSBTAG00000049339	-	93	42.857	ENSBTAG00000030470	-	92	40.940
ENSBTAG00000049339	-	85	50.000	ENSBTAG00000049158	ZNF596	87	46.875
ENSBTAG00000049339	-	85	44.948	ENSBTAG00000038088	-	95	44.948
ENSBTAG00000049339	-	99	43.137	ENSBTAG00000000868	ZFP1	84	43.137
ENSBTAG00000049339	-	83	44.815	ENSBTAG00000016077	ZNF317	86	44.815
ENSBTAG00000049339	-	86	46.341	ENSBTAG00000050035	ZNF226	76	46.341
ENSBTAG00000049339	-	90	30.476	ENSBTAG00000016299	ZNF784	68	30.476
ENSBTAG00000049339	-	81	54.472	ENSBTAG00000016721	-	99	54.472
ENSBTAG00000049339	-	91	39.506	ENSBTAG00000017397	ZNF423	94	39.506
ENSBTAG00000049339	-	85	37.662	ENSBTAG00000051572	ZNF646	57	37.662
ENSBTAG00000049339	-	83	44.948	ENSBTAG00000040209	ZNF112	81	44.948
ENSBTAG00000049339	-	98	31.313	ENSBTAG00000020754	ZNF526	78	33.221
ENSBTAG00000049339	-	81	49.583	ENSBTAG00000030348	ZNF582	71	49.583
ENSBTAG00000049339	-	83	48.201	ENSBTAG00000016191	ZNF32	73	48.201
ENSBTAG00000049339	-	90	39.731	ENSBTAG00000032018	ZNF19	83	39.731
ENSBTAG00000049339	-	81	39.815	ENSBTAG00000021789	ZNF574	60	39.286
ENSBTAG00000049339	-	84	46.809	ENSBTAG00000007714	ZNF235	74	46.809
ENSBTAG00000049339	-	82	39.801	ENSBTAG00000014593	-	77	40.070
ENSBTAG00000049339	-	92	36.475	ENSBTAG00000002291	ZBTB41	70	36.475
ENSBTAG00000049339	-	81	42.446	ENSBTAG00000050322	-	64	42.446
ENSBTAG00000049339	-	81	33.229	ENSBTAG00000045572	ZNF319	88	32.628
ENSBTAG00000049339	-	88	36.364	ENSBTAG00000012111	PRDM5	75	36.364
ENSBTAG00000049339	-	100	47.347	ENSBTAG00000054022	ZNF250	82	43.007

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000049339	-	96	49.635	ENSG00000196757	ZNF700	92	49.635	Homo_sapiens
ENSBTAG00000049339	-	96	50.347	ENSAMEG00000012006	-	89	52.265	Ailuropoda_melanoleuca
ENSBTAG00000049339	-	81	48.333	ENSCJAG00000005453	-	99	48.333	Callithrix_jacchus
ENSBTAG00000049339	-	96	53.310	ENSCAFG00000032123	-	86	58.958	Canis_familiaris
ENSBTAG00000049339	-	95	50.327	ENSCAFG00000031471	-	87	52.265	Canis_familiaris
ENSBTAG00000049339	-	82	50.209	ENSCAFG00020005065	-	99	50.209	Canis_lupus_dingo
ENSBTAG00000049339	-	89	52.632	ENSCAFG00020005083	-	99	52.632	Canis_lupus_dingo
ENSBTAG00000049339	-	100	52.632	ENSCHIG00000008992	-	95	52.632	Capra_hircus
ENSBTAG00000049339	-	100	50.838	ENSCHIG00000020779	-	89	51.057	Capra_hircus
ENSBTAG00000049339	-	96	51.471	ENSCCAG00000027336	ZNF791	90	53.310	Cebus_capucinus
ENSBTAG00000049339	-	81	48.000	ENSCCAG00000024419	-	97	53.846	Cebus_capucinus
ENSBTAG00000049339	-	96	52.187	ENSCATG00000041735	ZNF791	90	53.310	Cercocebus_atys
ENSBTAG00000049339	-	96	50.853	ENSCATG00000025335	ZNF700	89	50.853	Cercocebus_atys
ENSBTAG00000049339	-	96	49.673	ENSCSAG00000006686	ZNF700	90	49.673	Chlorocebus_sabaeus
ENSBTAG00000049339	-	96	52.187	ENSCSAG00000006632	ZNF791	97	53.310	Chlorocebus_sabaeus
ENSBTAG00000049339	-	96	47.552	ENSCGRG00001001639	Zfp882	96	47.552	Cricetulus_griseus_chok1gshd
ENSBTAG00000049339	-	95	50.350	ENSCGRG00000013919	Zfp709	91	50.350	Cricetulus_griseus_crigri
ENSBTAG00000049339	-	95	50.174	ENSEASG00005022060	-	91	50.174	Equus_asinus_asinus
ENSBTAG00000049339	-	89	54.468	ENSEASG00005004242	-	85	52.365	Equus_asinus_asinus
ENSBTAG00000049339	-	89	49.521	ENSEASG00005014394	-	92	49.521	Equus_asinus_asinus
ENSBTAG00000049339	-	88	51.648	ENSEASG00005004237	-	79	51.648	Equus_asinus_asinus
ENSBTAG00000049339	-	100	52.727	ENSEASG00005004284	-	95	52.962	Equus_asinus_asinus
ENSBTAG00000049339	-	89	53.310	ENSEASG00005004288	-	99	53.310	Equus_asinus_asinus
ENSBTAG00000049339	-	81	62.295	ENSEASG00005011546	-	100	52.448	Equus_asinus_asinus
ENSBTAG00000049339	-	98	51.705	ENSEASG00005004229	-	98	54.355	Equus_asinus_asinus
ENSBTAG00000049339	-	81	50.362	ENSEASG00005004225	-	99	50.362	Equus_asinus_asinus
ENSBTAG00000049339	-	87	58.824	ENSECAG00000018881	-	98	58.824	Equus_caballus
ENSBTAG00000049339	-	95	50.174	ENSECAG00000032997	-	96	50.174	Equus_caballus
ENSBTAG00000049339	-	89	50.578	ENSECAG00000005497	-	99	51.258	Equus_caballus
ENSBTAG00000049339	-	98	49.519	ENSECAG00000000636	-	86	48.679	Equus_caballus
ENSBTAG00000049339	-	91	51.803	ENSECAG00000036480	-	87	51.803	Equus_caballus
ENSBTAG00000049339	-	89	52.727	ENSECAG00000034536	-	87	49.371	Equus_caballus
ENSBTAG00000049339	-	89	51.307	ENSECAG00000024804	-	99	52.098	Equus_caballus
ENSBTAG00000049339	-	81	56.190	ENSECAG00000018175	-	97	57.143	Equus_caballus
ENSBTAG00000049339	-	94	49.621	ENSECAG00000031831	-	93	49.621	Equus_caballus
ENSBTAG00000049339	-	89	53.310	ENSECAG00000009346	-	99	53.310	Equus_caballus
ENSBTAG00000049339	-	83	46.875	ENSEEUG00000013556	-	99	46.875	Erinaceus_europaeus
ENSBTAG00000049339	-	95	43.007	ENSEEUG00000008954	-	81	49.231	Erinaceus_europaeus
ENSBTAG00000049339	-	95	48.511	ENSEEUG00000009480	-	83	48.511	Erinaceus_europaeus
ENSBTAG00000049339	-	96	52.193	ENSFCAG00000039667	-	91	52.083	Felis_catus
ENSBTAG00000049339	-	96	51.195	ENSGGOG00000038420	ZNF700	90	51.195	Gorilla_gorilla
ENSBTAG00000049339	-	96	52.586	ENSGGOG00000011661	ZNF878	89	51.634	Gorilla_gorilla
ENSBTAG00000049339	-	96	52.191	ENSJJAG00000012972	Zfp709	92	52.191	Jaculus_jaculus
ENSBTAG00000049339	-	96	43.554	ENSJJAG00000014350	Zfp961	86	44.410	Jaculus_jaculus
ENSBTAG00000049339	-	96	50.512	ENSMFAG00000034497	ZNF700	89	50.512	Macaca_fascicularis
ENSBTAG00000049339	-	96	52.187	ENSMFAG00000036181	ZNF791	90	53.310	Macaca_fascicularis
ENSBTAG00000049339	-	96	51.895	ENSMMUG00000016862	ZNF791	90	53.310	Macaca_mulatta
ENSBTAG00000049339	-	96	50.512	ENSMMUG00000012587	ZNF700	89	50.512	Macaca_mulatta
ENSBTAG00000049339	-	96	52.187	ENSMNEG00000045545	ZNF791	97	53.310	Macaca_nemestrina
ENSBTAG00000049339	-	96	50.000	ENSMNEG00000030711	ZNF700	92	50.512	Macaca_nemestrina
ENSBTAG00000049339	-	96	53.079	ENSMLEG00000034449	ZNF791	90	53.310	Mandrillus_leucophaeus
ENSBTAG00000049339	-	81	47.902	ENSMAUG00000010647	Zfp882	96	47.902	Mesocricetus_auratus
ENSBTAG00000049339	-	95	48.507	ENSMAUG00000007713	Zfp868	79	48.507	Mesocricetus_auratus
ENSBTAG00000049339	-	95	48.263	ENSMICG00000042598	-	87	49.129	Microcebus_murinus
ENSBTAG00000049339	-	95	48.679	ENSMICG00000027210	-	83	48.679	Microcebus_murinus
ENSBTAG00000049339	-	96	52.083	ENSMICG00000033630	-	85	52.083	Microcebus_murinus
ENSBTAG00000049339	-	100	52.153	ENSMICG00000044274	-	93	52.153	Microcebus_murinus
ENSBTAG00000049339	-	95	36.631	ENSMOCG00000014774	Zfp961	84	41.115	Microtus_ochrogaster
ENSBTAG00000049339	-	81	44.637	ENSMOCG00000020165	Zfp101	70	44.599	Microtus_ochrogaster
ENSBTAG00000049339	-	95	48.378	MGP_CAROLIEiJ_G0016437	Zfp867	78	51.736	Mus_caroli
ENSBTAG00000049339	-	98	47.902	MGP_CAROLIEiJ_G0031203	Zfp882	90	47.902	Mus_caroli
ENSBTAG00000049339	-	95	48.378	ENSMUSG00000054519	Zfp867	78	52.083	Mus_musculus
ENSBTAG00000049339	-	96	50.699	ENSMUSG00000056019	Zfp709	93	50.699	Mus_musculus
ENSBTAG00000049339	-	96	47.902	ENSMUSG00000089857	Zfp882	85	47.902	Mus_musculus
ENSBTAG00000049339	-	98	48.252	MGP_PahariEiJ_G0021668	Zfp882	90	48.252	Mus_pahari
ENSBTAG00000049339	-	95	48.083	MGP_PahariEiJ_G0017567	Zfp867	78	51.736	Mus_pahari
ENSBTAG00000049339	-	95	48.083	MGP_SPRETEiJ_G0017272	Zfp867	78	51.736	Mus_spretus
ENSBTAG00000049339	-	96	56.863	ENSMPUG00000004901	-	87	56.863	Mustela_putorius_furo
ENSBTAG00000049339	-	96	52.632	ENSMPUG00000004877	-	90	52.632	Mustela_putorius_furo
ENSBTAG00000049339	-	96	49.675	ENSMLUG00000003693	-	90	49.606	Myotis_lucifugus
ENSBTAG00000049339	-	83	50.549	ENSNLEG00000012661	ZNF700	90	50.549	Nomascus_leucogenys
ENSBTAG00000049339	-	98	47.191	ENSOCUG00000029755	-	99	47.191	Oryctolagus_cuniculus
ENSBTAG00000049339	-	94	46.885	ENSOGAG00000002111	-	90	47.112	Otolemur_garnettii
ENSBTAG00000049339	-	98	96.581	ENSOARG00000012765	-	90	96.581	Ovis_aries
ENSBTAG00000049339	-	100	52.632	ENSOARG00000012703	-	88	52.632	Ovis_aries
ENSBTAG00000049339	-	96	48.432	ENSPPRG00000011201	-	88	49.699	Panthera_pardus
ENSBTAG00000049339	-	97	50.549	ENSPTIG00000012277	-	97	51.568	Panthera_tigris_altaica
ENSBTAG00000049339	-	87	47.006	ENSPTIG00000009499	-	98	45.645	Panthera_tigris_altaica
ENSBTAG00000049339	-	82	50.000	ENSPTIG00000009517	-	99	51.724	Panthera_tigris_altaica
ENSBTAG00000049339	-	96	50.000	ENSPTRG00000010515	ZNF700	90	50.000	Pan_troglodytes
ENSBTAG00000049339	-	96	50.853	ENSPANG00000004914	ZNF700	89	50.853	Papio_anubis
ENSBTAG00000049339	-	95	48.780	ENSPEMG00000022834	Zfp709	91	50.190	Peromyscus_maniculatus_bairdii
ENSBTAG00000049339	-	80	41.722	ENSPMAG00000006708	-	96	41.722	Petromyzon_marinus
ENSBTAG00000049339	-	95	49.477	ENSPPYG00000009596	ZNF791	93	54.704	Pongo_abelii
ENSBTAG00000049339	-	98	49.000	ENSPPYG00000009590	ZNF700	90	49.826	Pongo_abelii
ENSBTAG00000049339	-	95	53.506	ENSPPYG00000029413	-	89	54.819	Pongo_abelii
ENSBTAG00000049339	-	85	46.965	ENSPCAG00000007476	-	99	46.865	Procavia_capensis
ENSBTAG00000049339	-	96	52.613	ENSPCOG00000024437	-	89	52.613	Propithecus_coquereli
ENSBTAG00000049339	-	88	48.601	ENSPCOG00000025734	-	90	46.786	Propithecus_coquereli
ENSBTAG00000049339	-	96	53.936	ENSPCOG00000015720	ZNF791	90	53.614	Propithecus_coquereli
ENSBTAG00000049339	-	87	50.174	ENSPCOG00000014758	-	98	50.174	Propithecus_coquereli
ENSBTAG00000049339	-	81	51.418	ENSPVAG00000002257	-	75	51.418	Pteropus_vampyrus
ENSBTAG00000049339	-	96	51.237	ENSPVAG00000015563	-	90	51.568	Pteropus_vampyrus
ENSBTAG00000049339	-	94	50.000	ENSPVAG00000001626	-	95	47.826	Pteropus_vampyrus
ENSBTAG00000049339	-	95	46.746	ENSRNOG00000022431	Zfp867	79	50.174	Rattus_norvegicus
ENSBTAG00000049339	-	87	48.601	ENSRNOG00000016417	Zfp136	98	48.601	Rattus_norvegicus
ENSBTAG00000049339	-	99	50.579	ENSRBIG00000043636	ZNF700	98	50.903	Rhinopithecus_bieti
ENSBTAG00000049339	-	89	51.724	ENSRBIG00000041827	ZNF878	99	50.654	Rhinopithecus_bieti
ENSBTAG00000049339	-	96	52.478	ENSRROG00000031644	ZNF791	90	53.310	Rhinopithecus_roxellana
ENSBTAG00000049339	-	95	50.523	ENSRROG00000030540	ZNF700	92	50.174	Rhinopithecus_roxellana
ENSBTAG00000049339	-	97	49.826	ENSSBOG00000024486	ZNF791	92	53.310	Saimiri_boliviensis_boliviensis
ENSBTAG00000049339	-	96	52.790	ENSSSCG00000029347	-	96	51.220	Sus_scrofa
ENSBTAG00000049339	-	95	51.938	ENSSSCG00000022634	-	92	51.938	Sus_scrofa
ENSBTAG00000049339	-	96	43.750	ENSSSCG00000039774	-	86	47.710	Sus_scrofa
ENSBTAG00000049339	-	100	62.435	ENSSSCG00000036608	-	99	55.462	Sus_scrofa
ENSBTAG00000049339	-	99	50.327	ENSTTRG00000000768	-	94	51.541	Tursiops_truncatus
ENSBTAG00000049339	-	84	58.278	ENSTTRG00000003482	-	99	58.278	Tursiops_truncatus
ENSBTAG00000049339	-	84	59.344	ENSUAMG00000017817	-	94	59.344	Ursus_americanus
ENSBTAG00000049339	-	98	51.961	ENSUAMG00000019652	-	89	51.961	Ursus_americanus
ENSBTAG00000049339	-	85	50.327	ENSUMAG00000007577	-	98	52.265	Ursus_maritimus
ENSBTAG00000049339	-	84	59.344	ENSUMAG00000019496	-	94	59.344	Ursus_maritimus
ENSBTAG00000049339	-	96	55.848	ENSVPAG00000009652	-	89	56.798	Vicugna_pacos
ENSBTAG00000049339	-	82	50.209	ENSVVUG00000023811	-	99	50.209	Vulpes_vulpes
ENSBTAG00000049339	-	89	52.632	ENSVVUG00000023819	-	99	52.265	Vulpes_vulpes