EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000049538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 1017 bases
Position: chr18:24074703-24075719
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000066431	RVT_1	PF00078.27	1.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000081901	-	1017	-	ENSBTAP00000066431	338 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000049538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000049538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000049538	-	97	90.854	ENSBTAG00000051723	-	97	90.854
ENSBTAG00000049538	-	97	77.439	ENSBTAG00000053711	-	91	77.439
ENSBTAG00000049538	-	71	90.041	ENSBTAG00000055310	-	100	90.041
ENSBTAG00000049538	-	100	65.487	ENSBTAG00000052711	-	99	65.487
ENSBTAG00000049538	-	63	93.953	ENSBTAG00000050601	-	85	93.953
ENSBTAG00000049538	-	97	92.073	ENSBTAG00000055227	-	51	92.073
ENSBTAG00000049538	-	85	89.236	ENSBTAG00000054067	-	100	89.236
ENSBTAG00000049538	-	97	91.768	ENSBTAG00000052602	-	50	91.768
ENSBTAG00000049538	-	97	91.768	ENSBTAG00000050692	-	50	91.768
ENSBTAG00000049538	-	83	90.426	ENSBTAG00000050159	-	100	90.426
ENSBTAG00000049538	-	97	91.159	ENSBTAG00000054339	-	99	91.159
ENSBTAG00000049538	-	80	90.335	ENSBTAG00000054573	-	95	89.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000049538	-	99	73.810	ENSSSCG00000034560	-	82	89.796	Sus_scrofa
ENSBTAG00000049538	-	76	77.132	ENSSSCG00000037695	-	100	77.132	Sus_scrofa
ENSBTAG00000049538	-	91	76.774	ENSSSCG00000033884	-	88	76.774	Sus_scrofa