EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000050093 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 5347 bases
Position: chr29:4649325-4654671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070412	zf-C2H2	PF00096.26	5.2e-28	1	5
ENSBTAP00000070412	zf-C2H2	PF00096.26	5.2e-28	2	5
ENSBTAP00000070412	zf-C2H2	PF00096.26	5.2e-28	3	5
ENSBTAP00000070412	zf-C2H2	PF00096.26	5.2e-28	4	5
ENSBTAP00000070412	zf-C2H2	PF00096.26	5.2e-28	5	5
ENSBTAP00000070412	Transposase_22	PF02994.14	6.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000073386	-	1182	-	ENSBTAP00000070412	393 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000050093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000050093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000050093	-	50	52.632	ENSBTAG00000030470	-	74	50.307
ENSBTAG00000050093	-	51	52.147	ENSBTAG00000054022	ZNF250	82	54.777
ENSBTAG00000050093	-	63	45.652	ENSBTAG00000017517	ZNF236	60	45.652
ENSBTAG00000050093	-	54	47.656	ENSBTAG00000045572	ZNF319	88	47.656
ENSBTAG00000050093	-	50	48.000	ENSBTAG00000049339	-	81	48.000
ENSBTAG00000050093	-	52	57.143	ENSBTAG00000000868	ZFP1	75	57.143
ENSBTAG00000050093	-	53	52.258	ENSBTAG00000049158	ZNF596	82	52.258
ENSBTAG00000050093	-	53	40.964	ENSBTAG00000012111	PRDM5	72	40.964
ENSBTAG00000050093	-	60	43.860	ENSBTAG00000010113	ZBTB24	52	43.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000050093	-	66	58.228	ENSAMEG00000000176	ZNF599	87	58.228	Ailuropoda_melanoleuca
ENSBTAG00000050093	-	65	58.228	ENSCAFG00000030117	ZNF599	86	58.228	Canis_familiaris
ENSBTAG00000050093	-	65	58.228	ENSCAFG00020019570	ZNF599	86	58.228	Canis_lupus_dingo
ENSBTAG00000050093	-	65	58.228	ENSTSYG00000034979	ZNF599	84	58.228	Carlito_syrichta
ENSBTAG00000050093	-	60	57.325	ENSCGRG00000016421	-	88	57.325	Cricetulus_griseus_crigri
ENSBTAG00000050093	-	66	53.205	ENSEASG00005021374	-	83	53.205	Equus_asinus_asinus
ENSBTAG00000050093	-	68	57.595	ENSMPUG00000007415	ZNF599	86	57.595	Mustela_putorius_furo
ENSBTAG00000050093	-	66	58.861	ENSSSCG00000035876	ZNF599	99	58.871	Sus_scrofa
ENSBTAG00000050093	-	65	58.228	ENSVVUG00000016339	ZNF599	92	58.228	Vulpes_vulpes