EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000050222 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 4401 bases
Position: chr7:71358400-71362800
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059712	Ribosomal_L30	PF00327.20	7.5e-07	1	1
ENSBTAP00000073313	Ribosomal_L30	PF00327.20	9.5e-07	1	1
ENSBTAP00000070104	Ribosomal_L30	PF00327.20	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000076378	-	492	-	ENSBTAP00000073313	163 (aa)	-	-
ENSBTAT00000086904	-	540	-	ENSBTAP00000070104	179 (aa)	-	-
ENSBTAT00000082359	-	444	-	ENSBTAP00000059712	147 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000050222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000050222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000050222	-	94	53.595	ENSBTAG00000038949	MRPL30	94	53.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000050222	-	94	55.556	ENSG00000185414	MRPL30	94	55.556	Homo_sapiens
ENSBTAG00000050222	-	95	56.774	ENSAMEG00000013344	-	84	56.774	Ailuropoda_melanoleuca
ENSBTAG00000050222	-	94	54.248	ENSANAG00000028266	-	94	54.248	Aotus_nancymaae
ENSBTAG00000050222	-	94	54.902	ENSCJAG00000007085	-	96	54.430	Callithrix_jacchus
ENSBTAG00000050222	-	93	55.921	ENSCAFG00000031628	-	94	55.921	Canis_familiaris
ENSBTAG00000050222	-	93	55.921	ENSCAFG00020024965	-	94	55.921	Canis_lupus_dingo
ENSBTAG00000050222	-	94	54.248	ENSCHIG00000024135	-	94	54.248	Capra_hircus
ENSBTAG00000050222	-	94	53.595	ENSTSYG00000026939	-	94	53.595	Carlito_syrichta
ENSBTAG00000050222	-	93	42.105	ENSTSYG00000037066	-	93	42.105	Carlito_syrichta
ENSBTAG00000050222	-	90	53.741	ENSCPOG00000010716	-	95	53.741	Cavia_porcellus
ENSBTAG00000050222	-	94	54.305	ENSCCAG00000017186	-	96	53.846	Cebus_capucinus
ENSBTAG00000050222	-	94	52.941	ENSCCAG00000034467	-	96	52.532	Cebus_capucinus
ENSBTAG00000050222	-	94	52.941	ENSCATG00000041078	-	94	52.941	Cercocebus_atys
ENSBTAG00000050222	-	90	54.422	ENSCLAG00000005684	-	85	52.597	Chinchilla_lanigera
ENSBTAG00000050222	-	90	52.703	ENSCSAG00000017218	-	91	52.703	Chlorocebus_sabaeus
ENSBTAG00000050222	-	90	49.324	ENSCHOG00000005804	-	86	49.324	Choloepus_hoffmanni
ENSBTAG00000050222	-	94	52.288	ENSCANG00000043682	-	94	52.288	Colobus_angolensis_palliatus
ENSBTAG00000050222	-	95	53.247	ENSCGRG00001006119	Mrpl30	96	53.247	Cricetulus_griseus_chok1gshd
ENSBTAG00000050222	-	95	53.247	ENSCGRG00000001910	Mrpl30	96	53.247	Cricetulus_griseus_crigri
ENSBTAG00000050222	-	95	52.258	ENSDNOG00000044391	-	96	52.258	Dasypus_novemcinctus
ENSBTAG00000050222	-	84	54.745	ENSDNOG00000042586	-	84	54.745	Dasypus_novemcinctus
ENSBTAG00000050222	-	93	53.947	ENSDNOG00000018648	-	94	53.947	Dasypus_novemcinctus
ENSBTAG00000050222	-	93	54.305	ENSDNOG00000032825	-	94	54.305	Dasypus_novemcinctus
ENSBTAG00000050222	-	95	53.247	ENSDORG00000010734	Mrpl30	96	53.247	Dipodomys_ordii
ENSBTAG00000050222	-	90	54.422	ENSETEG00000005006	-	86	54.422	Echinops_telfairi
ENSBTAG00000050222	-	90	57.823	ENSEASG00005021843	-	57	57.823	Equus_asinus_asinus
ENSBTAG00000050222	-	90	57.823	ENSECAG00000015993	-	57	57.823	Equus_caballus
ENSBTAG00000050222	-	95	56.494	ENSFCAG00000024233	-	63	56.494	Felis_catus
ENSBTAG00000050222	-	90	52.381	ENSFDAG00000009803	-	82	52.381	Fukomys_damarensis
ENSBTAG00000050222	-	94	54.248	ENSGGOG00000041571	-	94	54.248	Gorilla_gorilla
ENSBTAG00000050222	-	90	52.027	ENSHGLG00000006467	-	95	52.027	Heterocephalus_glaber_female
ENSBTAG00000050222	-	90	52.027	ENSHGLG00100016969	-	95	52.027	Heterocephalus_glaber_male
ENSBTAG00000050222	-	95	54.194	ENSJJAG00000006196	Mrpl30	96	54.194	Jaculus_jaculus
ENSBTAG00000050222	-	86	57.447	ENSLAFG00000008151	-	77	57.447	Loxodonta_africana
ENSBTAG00000050222	-	90	53.378	ENSMFAG00000001729	MRPL30	91	53.378	Macaca_fascicularis
ENSBTAG00000050222	-	90	53.378	ENSMMUG00000038088	-	91	53.378	Macaca_mulatta
ENSBTAG00000050222	-	90	48.507	ENSMNEG00000034146	-	90	48.507	Macaca_nemestrina
ENSBTAG00000050222	-	90	54.054	ENSMLEG00000027758	-	91	54.054	Mandrillus_leucophaeus
ENSBTAG00000050222	-	95	52.288	ENSMAUG00000021333	-	89	52.288	Mesocricetus_auratus
ENSBTAG00000050222	-	95	53.896	ENSMAUG00000017646	-	96	50.299	Mesocricetus_auratus
ENSBTAG00000050222	-	93	51.449	ENSMAUG00000014813	-	94	51.449	Mesocricetus_auratus
ENSBTAG00000050222	-	92	55.333	ENSMICG00000011627	-	93	55.333	Microcebus_murinus
ENSBTAG00000050222	-	95	52.597	ENSMOCG00000005615	Mrpl30	97	54.110	Microtus_ochrogaster
ENSBTAG00000050222	-	95	52.597	MGP_CAROLIEiJ_G0014057	Mrpl30	95	55.738	Mus_caroli
ENSBTAG00000050222	-	92	52.667	ENSMUSG00000026087	Mrpl30	91	55.932	Mus_musculus
ENSBTAG00000050222	-	95	51.299	MGP_PahariEiJ_G0027303	Mrpl30	95	54.918	Mus_pahari
ENSBTAG00000050222	-	95	51.948	MGP_SPRETEiJ_G0014861	Mrpl30	95	54.918	Mus_spretus
ENSBTAG00000050222	-	93	55.629	ENSMPUG00000011085	-	94	55.629	Mustela_putorius_furo
ENSBTAG00000050222	-	93	53.289	ENSMLUG00000029851	-	94	53.289	Myotis_lucifugus
ENSBTAG00000050222	-	95	50.000	ENSNGAG00000020323	Mrpl30	97	51.034	Nannospalax_galili
ENSBTAG00000050222	-	94	54.902	ENSNLEG00000027490	-	94	54.902	Nomascus_leucogenys
ENSBTAG00000050222	-	83	56.204	ENSOPRG00000007331	-	86	54.167	Ochotona_princeps
ENSBTAG00000050222	-	87	51.049	ENSODEG00000009949	-	88	51.049	Octodon_degus
ENSBTAG00000050222	-	87	51.049	ENSODEG00000019187	-	79	51.049	Octodon_degus
ENSBTAG00000050222	-	87	51.049	ENSODEG00000018681	-	79	51.049	Octodon_degus
ENSBTAG00000050222	-	89	50.685	ENSODEG00000006001	-	89	50.685	Octodon_degus
ENSBTAG00000050222	-	89	54.110	ENSOCUG00000004111	-	90	54.110	Oryctolagus_cuniculus
ENSBTAG00000050222	-	90	53.741	ENSOGAG00000025954	-	91	53.741	Otolemur_garnettii
ENSBTAG00000050222	-	90	55.782	ENSOGAG00000002241	-	87	55.782	Otolemur_garnettii
ENSBTAG00000050222	-	90	54.110	ENSOGAG00000030016	-	92	54.110	Otolemur_garnettii
ENSBTAG00000050222	-	91	54.362	ENSOARG00000013442	-	92	54.362	Ovis_aries
ENSBTAG00000050222	-	94	54.248	ENSPPAG00000038932	-	94	54.248	Pan_paniscus
ENSBTAG00000050222	-	93	57.237	ENSPPRG00000008888	-	94	57.237	Panthera_pardus
ENSBTAG00000050222	-	93	56.579	ENSPTIG00000004998	-	94	56.579	Panthera_tigris_altaica
ENSBTAG00000050222	-	94	54.248	ENSPTRG00000012275	-	94	54.248	Pan_troglodytes
ENSBTAG00000050222	-	90	54.054	ENSPANG00000033489	-	91	54.054	Papio_anubis
ENSBTAG00000050222	-	95	53.247	ENSPEMG00000018330	-	96	53.247	Peromyscus_maniculatus_bairdii
ENSBTAG00000050222	-	92	48.667	ENSPEMG00000007715	-	93	48.667	Peromyscus_maniculatus_bairdii
ENSBTAG00000050222	-	94	54.248	ENSPPYG00000019961	-	94	54.248	Pongo_abelii
ENSBTAG00000050222	-	92	56.667	ENSPCOG00000013471	-	93	56.667	Propithecus_coquereli
ENSBTAG00000050222	-	92	56.000	ENSPCOG00000000860	-	93	56.000	Propithecus_coquereli
ENSBTAG00000050222	-	93	55.263	ENSPVAG00000006587	-	88	55.263	Pteropus_vampyrus
ENSBTAG00000050222	-	95	52.597	ENSRNOG00000049330	Mrpl30	96	52.597	Rattus_norvegicus
ENSBTAG00000050222	-	94	50.980	ENSRBIG00000041744	-	94	50.980	Rhinopithecus_bieti
ENSBTAG00000050222	-	94	52.941	ENSRROG00000044692	-	94	52.941	Rhinopithecus_roxellana
ENSBTAG00000050222	-	94	54.902	ENSSBOG00000036412	-	96	54.430	Saimiri_boliviensis_boliviensis
ENSBTAG00000050222	-	81	45.833	ENSSPUG00000000679	-	68	43.077	Sphenodon_punctatus
ENSBTAG00000050222	-	95	54.194	ENSSSCG00000008183	-	96	54.194	Sus_scrofa
ENSBTAG00000050222	-	84	55.474	ENSTTRG00000004937	-	78	55.474	Tursiops_truncatus
ENSBTAG00000050222	-	93	55.263	ENSUAMG00000015567	-	94	55.263	Ursus_americanus
ENSBTAG00000050222	-	93	55.921	ENSUMAG00000008932	-	87	53.614	Ursus_maritimus