EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000050457 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 306 bases
Position: chr22:52369998-52370303
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000057187	RRM_1	PF00076.22	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000080722	-	306	-	ENSBTAP00000057187	101 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000050457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000050457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000050457	-	98	89.000	ENSBTAG00000008135	SLIRP	92	88.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000050457	-	98	78.000	ENSCAFG00000017230	SLIRP	92	77.451	Canis_familiaris
ENSBTAG00000050457	-	98	78.000	ENSCAFG00020000852	-	92	77.451	Canis_lupus_dingo
ENSBTAG00000050457	-	100	84.158	ENSCHIG00000002964	-	92	84.158	Capra_hircus
ENSBTAG00000050457	-	100	88.235	ENSCHIG00000019077	-	94	88.235	Capra_hircus
ENSBTAG00000050457	-	99	71.287	ENSCPOG00000001500	-	91	71.287	Cavia_porcellus
ENSBTAG00000050457	-	100	71.569	ENSCLAG00000008545	-	92	71.569	Chinchilla_lanigera
ENSBTAG00000050457	-	88	60.000	ENSDNOG00000041397	-	82	60.000	Dasypus_novemcinctus
ENSBTAG00000050457	-	100	80.392	ENSECAG00000000712	SLIRP	92	80.392	Equus_caballus
ENSBTAG00000050457	-	97	70.707	ENSJJAG00000018723	-	92	70.588	Jaculus_jaculus
ENSBTAG00000050457	-	99	74.257	MGP_PahariEiJ_G0029754	-	91	74.257	Mus_pahari
ENSBTAG00000050457	-	90	80.220	ENSMLUG00000022403	-	92	74.257	Myotis_lucifugus
ENSBTAG00000050457	-	100	70.588	ENSOPRG00000007560	-	92	70.588	Ochotona_princeps
ENSBTAG00000050457	-	100	77.451	ENSOCUG00000009713	-	92	77.451	Oryctolagus_cuniculus
ENSBTAG00000050457	-	98	57.000	ENSOGAG00000027580	-	90	57.426	Otolemur_garnettii
ENSBTAG00000050457	-	98	89.000	ENSOARG00000002642	SLIRP	92	89.216	Ovis_aries
ENSBTAG00000050457	-	100	74.257	ENSOARG00000016139	-	92	74.257	Ovis_aries
ENSBTAG00000050457	-	90	56.522	ENSPCAG00000004290	-	92	52.941	Procavia_capensis
ENSBTAG00000050457	-	76	76.923	ENSPVAG00000006420	-	70	76.923	Pteropus_vampyrus
ENSBTAG00000050457	-	99	74.257	ENSRNOG00000012314	Slirp	91	74.257	Rattus_norvegicus
ENSBTAG00000050457	-	100	78.431	ENSTBEG00000013979	-	92	78.431	Tupaia_belangeri
ENSBTAG00000050457	-	96	74.490	ENSTTRG00000009328	-	92	74.510	Tursiops_truncatus