EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000050594 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 936 bases
Position: chr7:67757420-67758355
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060201	RRM_1	PF00076.22	7.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000072533	-	762	-	ENSBTAP00000060201	253 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000050594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000050594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000050594	-	57	55.479	ENSBTAG00000006727	-	85	56.835
ENSBTAG00000050594	-	67	85.864	ENSBTAG00000053753	-	63	94.083
ENSBTAG00000050594	-	89	86.792	ENSBTAG00000006884	PABPN1	88	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000050594	-	89	87.255	ENSG00000100836	PABPN1	86	95.172	Homo_sapiens
ENSBTAG00000050594	-	75	79.812	ENSG00000258643	BCL2L2-PABPN1	57	87.302	Homo_sapiens
ENSBTAG00000050594	-	76	79.293	ENSAPOG00000016425	pabpn1	84	76.531	Acanthochromis_polyacanthus
ENSBTAG00000050594	-	66	87.302	ENSAMEG00000007048	BCL2L2-PABPN1	88	95.808	Ailuropoda_melanoleuca
ENSBTAG00000050594	-	76	78.500	ENSACIG00000021744	pabpn1	94	73.653	Amphilophus_citrinellus
ENSBTAG00000050594	-	74	75.481	ENSAOCG00000015805	pabpn1	84	76.531	Amphiprion_ocellaris
ENSBTAG00000050594	-	74	75.481	ENSAPEG00000009623	pabpn1	84	76.531	Amphiprion_percula
ENSBTAG00000050594	-	74	75.481	ENSATEG00000020531	pabpn1	84	76.531	Anabas_testudineus
ENSBTAG00000050594	-	71	78.818	ENSACAG00000006185	-	70	80.102	Anolis_carolinensis
ENSBTAG00000050594	-	93	87.000	ENSANAG00000024513	-	71	87.755	Aotus_nancymaae
ENSBTAG00000050594	-	76	78.109	ENSACLG00000016374	pabpn1	61	82.486	Astatotilapia_calliptera
ENSBTAG00000050594	-	74	84.409	ENSAMXG00000000452	pabpn1	81	84.828	Astyanax_mexicanus
ENSBTAG00000050594	-	65	55.422	WBGene00003904	pabp-2	71	60.959	Caenorhabditis_elegans
ENSBTAG00000050594	-	57	83.832	ENSCJAG00000004407	-	73	93.103	Callithrix_jacchus
ENSBTAG00000050594	-	89	87.255	ENSCJAG00000007960	-	92	75.177	Callithrix_jacchus
ENSBTAG00000050594	-	93	86.486	ENSCAFG00000011482	PABPN1	98	71.237	Canis_familiaris
ENSBTAG00000050594	-	89	87.255	ENSCAFG00020007298	-	92	75.177	Canis_lupus_dingo
ENSBTAG00000050594	-	89	87.255	ENSCAFG00020006651	-	92	75.177	Canis_lupus_dingo
ENSBTAG00000050594	-	89	86.792	ENSCHIG00000012184	PABPN1	92	75.532	Capra_hircus
ENSBTAG00000050594	-	66	87.302	ENSTSYG00000033996	BCL2L2-PABPN1	81	95.172	Carlito_syrichta
ENSBTAG00000050594	-	51	94.531	ENSCAPG00000009461	-	91	94.531	Cavia_aperea
ENSBTAG00000050594	-	72	93.956	ENSCPOG00000025574	PABPN1	57	95.402	Cavia_porcellus
ENSBTAG00000050594	-	89	87.255	ENSCCAG00000033954	BCL2L2-PABPN1	92	75.177	Cebus_capucinus
ENSBTAG00000050594	-	89	87.255	ENSCATG00000038536	BCL2L2-PABPN1	92	75.177	Cercocebus_atys
ENSBTAG00000050594	-	72	67.647	ENSCLAG00000012423	PABPN1	57	82.895	Chinchilla_lanigera
ENSBTAG00000050594	-	72	85.784	ENSCSAG00000016036	PABPN1	92	73.759	Chlorocebus_sabaeus
ENSBTAG00000050594	-	89	77.114	ENSCHOG00000004798	BCL2L2-PABPN1	72	87.425	Choloepus_hoffmanni
ENSBTAG00000050594	-	57	80.240	ENSCPBG00000026060	-	94	80.240	Chrysemys_picta_bellii
ENSBTAG00000050594	-	67	62.032	ENSCING00000012468	-	80	65.193	Ciona_intestinalis
ENSBTAG00000050594	-	62	56.897	ENSCSAVG00000002001	-	93	59.236	Ciona_savignyi
ENSBTAG00000050594	-	66	87.302	ENSCANG00000009750	BCL2L2-PABPN1	81	95.172	Colobus_angolensis_palliatus
ENSBTAG00000050594	-	94	67.279	ENSCANG00000030980	-	69	73.711	Colobus_angolensis_palliatus
ENSBTAG00000050594	-	89	77.256	ENSCGRG00001019696	Pabpn1	81	94.483	Cricetulus_griseus_chok1gshd
ENSBTAG00000050594	-	58	98.639	ENSCGRG00000011102	Pabpn1	91	98.639	Cricetulus_griseus_crigri
ENSBTAG00000050594	-	74	81.720	ENSCSEG00000008774	pabpn1	84	76.020	Cynoglossus_semilaevis
ENSBTAG00000050594	-	67	84.091	ENSCVAG00000003152	pabpn1	84	76.142	Cyprinodon_variegatus
ENSBTAG00000050594	-	56	61.972	ENSDARG00000087996	pabpn1l	72	66.387	Danio_rerio
ENSBTAG00000050594	-	76	80.808	ENSDARG00000045373	pabpn1	78	85.632	Danio_rerio
ENSBTAG00000050594	-	89	87.255	ENSDNOG00000023682	PABPN1	92	75.177	Dasypus_novemcinctus
ENSBTAG00000050594	-	71	95.000	ENSDORG00000028966	-	57	95.402	Dipodomys_ordii
ENSBTAG00000050594	-	62	81.410	ENSDORG00000023928	-	92	80.690	Dipodomys_ordii
ENSBTAG00000050594	-	69	65.714	FBgn0005648	Pabp2	68	70.130	Drosophila_melanogaster
ENSBTAG00000050594	-	68	79.651	ENSEBUG00000002322	pabpn1	73	79.532	Eptatretus_burgeri
ENSBTAG00000050594	-	89	87.255	ENSEASG00005011716	PABPN1	92	75.177	Equus_asinus_asinus
ENSBTAG00000050594	-	89	81.853	ENSECAG00000011652	PABPN1	88	79.615	Equus_caballus
ENSBTAG00000050594	-	89	76.062	ENSEEUG00000012973	-	59	92.529	Erinaceus_europaeus
ENSBTAG00000050594	-	74	86.022	ENSELUG00000022654	pabpn1	73	87.931	Esox_lucius
ENSBTAG00000050594	-	89	87.255	ENSFCAG00000031922	PABPN1	92	75.177	Felis_catus
ENSBTAG00000050594	-	57	85.030	ENSFDAG00000018381	BCL2L2-PABPN1	81	94.483	Fukomys_damarensis
ENSBTAG00000050594	-	74	74.038	ENSFHEG00000007215	pabpn1	84	75.000	Fundulus_heteroclitus
ENSBTAG00000050594	-	74	83.871	ENSGMOG00000003922	pabpn1	60	85.632	Gadus_morhua
ENSBTAG00000050594	-	68	82.564	ENSGALG00000052930	-	58	81.218	Gallus_gallus
ENSBTAG00000050594	-	74	74.286	ENSGAFG00000017099	pabpn1	84	75.758	Gambusia_affinis
ENSBTAG00000050594	-	70	83.152	ENSGACG00000002167	pabpn1	64	90.506	Gasterosteus_aculeatus
ENSBTAG00000050594	-	89	62.868	ENSGGOG00000039675	-	72	74.227	Gorilla_gorilla
ENSBTAG00000050594	-	89	87.255	ENSGGOG00000022683	-	92	75.177	Gorilla_gorilla
ENSBTAG00000050594	-	90	71.654	ENSGGOG00000025919	-	83	79.365	Gorilla_gorilla
ENSBTAG00000050594	-	74	75.481	ENSHBUG00000019523	pabpn1	84	76.531	Haplochromis_burtoni
ENSBTAG00000050594	-	57	70.440	ENSHGLG00000009842	-	93	70.440	Heterocephalus_glaber_female
ENSBTAG00000050594	-	72	86.275	ENSHGLG00000002927	-	92	98.639	Heterocephalus_glaber_female
ENSBTAG00000050594	-	89	68.110	ENSHGLG00000018588	-	65	82.286	Heterocephalus_glaber_female
ENSBTAG00000050594	-	57	77.844	ENSHGLG00100018935	-	94	79.042	Heterocephalus_glaber_male
ENSBTAG00000050594	-	89	69.636	ENSHGLG00100015565	-	67	82.286	Heterocephalus_glaber_male
ENSBTAG00000050594	-	66	95.210	ENSHGLG00100006673	-	92	98.639	Heterocephalus_glaber_male
ENSBTAG00000050594	-	74	74.879	ENSHCOG00000004655	pabpn1	84	75.897	Hippocampus_comes
ENSBTAG00000050594	-	76	79.167	ENSIPUG00000000180	-	76	82.759	Ictalurus_punctatus
ENSBTAG00000050594	-	74	83.333	ENSIPUG00000008085	PABPN1	84	77.041	Ictalurus_punctatus
ENSBTAG00000050594	-	62	86.517	ENSSTOG00000029847	BCL2L2-PABPN1	81	95.172	Ictidomys_tridecemlineatus
ENSBTAG00000050594	-	62	86.517	ENSJJAG00000023507	Gm20521	81	95.172	Jaculus_jaculus
ENSBTAG00000050594	-	81	77.184	ENSKMAG00000018748	pabpn1	84	76.142	Kryptolebias_marmoratus
ENSBTAG00000050594	-	76	79.798	ENSLBEG00000027266	pabpn1	84	76.531	Labrus_bergylta
ENSBTAG00000050594	-	60	94.118	ENSLACG00000000646	pabpn1	74	88.235	Latimeria_chalumnae
ENSBTAG00000050594	-	72	62.376	ENSLOCG00000004694	pabpn1l	90	61.658	Lepisosteus_oculatus
ENSBTAG00000050594	-	74	83.871	ENSLOCG00000000796	pabpn1	62	85.632	Lepisosteus_oculatus
ENSBTAG00000050594	-	51	84.106	ENSLAFG00000031227	-	85	94.574	Loxodonta_africana
ENSBTAG00000050594	-	93	87.302	ENSMFAG00000032183	BCL2L2-PABPN1	81	95.172	Macaca_fascicularis
ENSBTAG00000050594	-	66	87.302	ENSMMUG00000014747	BCL2L2-PABPN1	85	95.161	Macaca_mulatta
ENSBTAG00000050594	-	95	61.204	ENSMMUG00000048382	-	65	72.308	Macaca_mulatta
ENSBTAG00000050594	-	89	87.255	ENSMNEG00000045065	BCL2L2-PABPN1	92	75.177	Macaca_nemestrina
ENSBTAG00000050594	-	95	65.649	ENSMNEG00000035750	-	99	78.014	Macaca_nemestrina
ENSBTAG00000050594	-	58	69.643	ENSMLEG00000034623	-	99	76.596	Mandrillus_leucophaeus
ENSBTAG00000050594	-	66	87.302	ENSMLEG00000043862	BCL2L2-PABPN1	81	95.172	Mandrillus_leucophaeus
ENSBTAG00000050594	-	74	82.796	ENSMAMG00000007979	pabpn1	61	84.483	Mastacembelus_armatus
ENSBTAG00000050594	-	76	79.798	ENSMZEG00005011904	pabpn1	60	84.483	Maylandia_zebra
ENSBTAG00000050594	-	89	77.256	ENSMAUG00000007383	Gm20521	66	87.245	Mesocricetus_auratus
ENSBTAG00000050594	-	97	83.582	ENSMICG00000010002	BCL2L2-PABPN1	64	95.977	Microcebus_murinus
ENSBTAG00000050594	-	89	76.895	ENSMOCG00000018557	Gm20521	90	98.639	Microtus_ochrogaster
ENSBTAG00000050594	-	76	80.303	ENSMMOG00000005405	pabpn1	84	77.041	Mola_mola
ENSBTAG00000050594	-	88	73.741	ENSMODG00000004535	-	86	76.923	Monodelphis_domestica
ENSBTAG00000050594	-	76	79.798	ENSMALG00000019612	pabpn1	60	84.483	Monopterus_albus
ENSBTAG00000050594	-	66	94.611	MGP_CAROLIEiJ_G0019276	Gm20521	50	94.611	Mus_caroli
ENSBTAG00000050594	-	89	81.569	MGP_CAROLIEiJ_G0019277	Pabpn1	90	97.959	Mus_caroli
ENSBTAG00000050594	-	89	81.569	ENSMUSG00000022194	Pabpn1	90	97.959	Mus_musculus
ENSBTAG00000050594	-	66	86.243	ENSMUSG00000092232	Gm20521	57	86.243	Mus_musculus
ENSBTAG00000050594	-	89	81.569	MGP_PahariEiJ_G0030295	Pabpn1	100	97.619	Mus_pahari
ENSBTAG00000050594	-	66	86.243	MGP_PahariEiJ_G0030294	Gm20521	57	86.243	Mus_pahari
ENSBTAG00000050594	-	89	81.569	MGP_SPRETEiJ_G0020166	Pabpn1	90	97.959	Mus_spretus
ENSBTAG00000050594	-	66	86.243	MGP_SPRETEiJ_G0020165	Gm20521	57	86.243	Mus_spretus
ENSBTAG00000050594	-	57	96.503	ENSMPUG00000006775	-	86	95.172	Mustela_putorius_furo
ENSBTAG00000050594	-	89	69.366	ENSMLUG00000012452	-	57	91.379	Myotis_lucifugus
ENSBTAG00000050594	-	66	85.714	ENSMLUG00000003800	-	100	85.714	Myotis_lucifugus
ENSBTAG00000050594	-	92	75.194	ENSMLUG00000028677	-	72	83.673	Myotis_lucifugus
ENSBTAG00000050594	-	66	87.302	ENSNGAG00000019529	Gm20521	57	87.302	Nannospalax_galili
ENSBTAG00000050594	-	76	79.798	ENSNBRG00000023955	pabpn1	94	73.653	Neolamprologus_brichardi
ENSBTAG00000050594	-	72	87.255	ENSNLEG00000015007	-	61	97.093	Nomascus_leucogenys
ENSBTAG00000050594	-	95	75.203	ENSNLEG00000030598	-	72	78.889	Nomascus_leucogenys
ENSBTAG00000050594	-	50	65.957	ENSNLEG00000035292	-	99	65.957	Nomascus_leucogenys
ENSBTAG00000050594	-	72	79.897	ENSODEG00000003739	-	66	80.645	Octodon_degus
ENSBTAG00000050594	-	61	84.416	ENSODEG00000011555	-	78	82.759	Octodon_degus
ENSBTAG00000050594	-	72	86.275	ENSODEG00000002083	BCL2L2-PABPN1	64	87.245	Octodon_degus
ENSBTAG00000050594	-	76	79.798	ENSONIG00000008112	pabpn1	60	84.483	Oreochromis_niloticus
ENSBTAG00000050594	-	87	85.849	ENSOCUG00000016174	PABPN1	72	86.735	Oryctolagus_cuniculus
ENSBTAG00000050594	-	74	83.333	ENSORLG00000027900	pabpn1	73	85.057	Oryzias_latipes
ENSBTAG00000050594	-	74	83.333	ENSORLG00020004681	pabpn1	59	85.057	Oryzias_latipes_hni
ENSBTAG00000050594	-	74	83.333	ENSORLG00015000018	pabpn1	84	77.041	Oryzias_latipes_hsok
ENSBTAG00000050594	-	74	82.796	ENSOMEG00000016618	pabpn1	64	84.483	Oryzias_melastigma
ENSBTAG00000050594	-	89	87.255	ENSOGAG00000008710	PABPN1	92	75.177	Otolemur_garnettii
ENSBTAG00000050594	-	75	79.812	ENSOARG00000019336	BCL2L2-PABPN1	52	87.302	Ovis_aries
ENSBTAG00000050594	-	57	96.503	ENSPPAG00000028984	BCL2L2-PABPN1	86	95.172	Pan_paniscus
ENSBTAG00000050594	-	57	71.856	ENSPPAG00000039421	-	93	71.856	Pan_paniscus
ENSBTAG00000050594	-	89	87.255	ENSPPRG00000010567	PABPN1	92	75.177	Panthera_pardus
ENSBTAG00000050594	-	62	86.517	ENSPTIG00000001063	BCL2L2-PABPN1	81	95.172	Panthera_tigris_altaica
ENSBTAG00000050594	-	89	87.255	ENSPTRG00000006167	BCL2L2	92	75.177	Pan_troglodytes
ENSBTAG00000050594	-	90	70.238	ENSPTRG00000047273	-	91	67.871	Pan_troglodytes
ENSBTAG00000050594	-	95	61.301	ENSPANG00000023326	-	99	78.014	Papio_anubis
ENSBTAG00000050594	-	89	87.255	ENSPANG00000021100	BCL2L2-PABPN1	92	75.177	Papio_anubis
ENSBTAG00000050594	-	70	63.830	ENSPKIG00000008340	pabpn1l	91	63.978	Paramormyrops_kingsleyae
ENSBTAG00000050594	-	66	87.952	ENSPKIG00000018052	pabpn1	74	85.057	Paramormyrops_kingsleyae
ENSBTAG00000050594	-	74	82.796	ENSPKIG00000008144	-	60	84.483	Paramormyrops_kingsleyae
ENSBTAG00000050594	-	74	82.258	ENSPMGG00000022027	pabpn1	63	83.908	Periophthalmus_magnuspinnatus
ENSBTAG00000050594	-	89	77.256	ENSPEMG00000008332	Gm20521	89	98.639	Peromyscus_maniculatus_bairdii
ENSBTAG00000050594	-	59	85.333	ENSPMAG00000006212	pabpn1	64	85.806	Petromyzon_marinus
ENSBTAG00000050594	-	67	95.882	ENSPCIG00000027751	-	64	85.204	Phascolarctos_cinereus
ENSBTAG00000050594	-	67	83.523	ENSPFOG00000010351	pabpn1	82	76.410	Poecilia_formosa
ENSBTAG00000050594	-	76	78.894	ENSPLAG00000022696	pabpn1	60	83.429	Poecilia_latipinna
ENSBTAG00000050594	-	76	71.622	ENSPMEG00000020856	pabpn1	82	76.410	Poecilia_mexicana
ENSBTAG00000050594	-	67	84.091	ENSPREG00000011278	pabpn1	84	75.758	Poecilia_reticulata
ENSBTAG00000050594	-	86	76.190	ENSPPYG00000005663	PABPN1	62	95.977	Pongo_abelii
ENSBTAG00000050594	-	88	70.656	ENSPCAG00000005902	PABPN1	88	68.462	Procavia_capensis
ENSBTAG00000050594	-	97	83.582	ENSPCOG00000028047	BCL2L2-PABPN1	64	95.977	Propithecus_coquereli
ENSBTAG00000050594	-	89	84.834	ENSPVAG00000005270	PABPN1	64	86.735	Pteropus_vampyrus
ENSBTAG00000050594	-	74	75.481	ENSPNYG00000013182	pabpn1	84	76.531	Pundamilia_nyererei
ENSBTAG00000050594	-	63	68.519	ENSPNAG00000021666	pabpn1l	91	63.636	Pygocentrus_nattereri
ENSBTAG00000050594	-	74	84.409	ENSPNAG00000023526	pabpn1	84	78.061	Pygocentrus_nattereri
ENSBTAG00000050594	-	89	77.256	ENSRNOG00000042195	Pabpn1	65	87.245	Rattus_norvegicus
ENSBTAG00000050594	-	66	95.808	ENSRBIG00000040762	BCL2L2-PABPN1	52	95.808	Rhinopithecus_bieti
ENSBTAG00000050594	-	95	75.833	ENSRBIG00000039547	-	62	81.503	Rhinopithecus_bieti
ENSBTAG00000050594	-	75	78.744	ENSRBIG00000042811	-	81	79.688	Rhinopithecus_bieti
ENSBTAG00000050594	-	92	70.616	ENSRROG00000036409	-	59	71.282	Rhinopithecus_roxellana
ENSBTAG00000050594	-	66	95.808	ENSRROG00000045535	BCL2L2-PABPN1	81	95.172	Rhinopithecus_roxellana
ENSBTAG00000050594	-	98	69.630	ENSRROG00000040409	-	71	74.872	Rhinopithecus_roxellana
ENSBTAG00000050594	-	57	96.503	ENSSBOG00000026930	BCL2L2-PABPN1	86	95.172	Saimiri_boliviensis_boliviensis
ENSBTAG00000050594	-	66	84.656	ENSSHAG00000014841	-	77	92.814	Sarcophilus_harrisii
ENSBTAG00000050594	-	81	65.403	ENSSHAG00000007707	-	74	71.264	Sarcophilus_harrisii
ENSBTAG00000050594	-	74	81.183	ENSSFOG00015012565	pabpn1	86	76.289	Scleropages_formosus
ENSBTAG00000050594	-	74	74.519	ENSSFOG00015014718	pabpn1	84	76.020	Scleropages_formosus
ENSBTAG00000050594	-	57	73.611	ENSSFOG00015015833	pabpn1l	80	67.630	Scleropages_formosus
ENSBTAG00000050594	-	76	79.798	ENSSMAG00000020157	pabpn1	84	76.531	Scophthalmus_maximus
ENSBTAG00000050594	-	76	79.798	ENSSDUG00000020582	pabpn1	60	84.483	Seriola_dumerili
ENSBTAG00000050594	-	74	75.481	ENSSLDG00000007118	pabpn1	84	76.531	Seriola_lalandi_dorsalis
ENSBTAG00000050594	-	57	79.641	ENSSPUG00000018308	-	81	88.276	Sphenodon_punctatus
ENSBTAG00000050594	-	74	83.333	ENSSPAG00000021658	pabpn1	74	85.057	Stegastes_partitus
ENSBTAG00000050594	-	89	87.255	ENSSSCG00000002023	PABPN1	92	75.177	Sus_scrofa
ENSBTAG00000050594	-	81	71.628	ENSSSCG00000034805	-	72	68.478	Sus_scrofa
ENSBTAG00000050594	-	76	80.303	ENSTRUG00000023664	pabpn1	84	77.041	Takifugu_rubripes
ENSBTAG00000050594	-	74	83.871	ENSTNIG00000005369	pabpn1	80	85.632	Tetraodon_nigroviridis
ENSBTAG00000050594	-	89	87.255	ENSUAMG00000024460	PABPN1	92	75.177	Ursus_americanus
ENSBTAG00000050594	-	75	86.387	ENSUMAG00000014288	BCL2L2-PABPN1	50	95.808	Ursus_maritimus
ENSBTAG00000050594	-	68	86.010	ENSVVUG00000019912	BCL2L2-PABPN1	66	95.808	Vulpes_vulpes
ENSBTAG00000050594	-	69	80.513	ENSXETG00000014597	pabpn1	66	82.564	Xenopus_tropicalis
ENSBTAG00000050594	-	60	63.277	ENSXCOG00000005158	pabpn1	76	82.946	Xiphophorus_couchianus
ENSBTAG00000050594	-	67	84.091	ENSXMAG00000006196	pabpn1	84	75.253	Xiphophorus_maculatus