EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000050728 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 2069 bases
Position: chr9:86890996-86893064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000038315	RRM_1	PF00076.22	9.5e-47	1	3
ENSBTAP00000038315	RRM_1	PF00076.22	9.5e-47	2	3
ENSBTAP00000038315	RRM_1	PF00076.22	9.5e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000038502	-	1389	-	ENSBTAP00000038315	462 (aa)	-	G3X7M4

Gene Model

Click here to download ENSBTAG00000050728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000050728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000050728	-	89	92.623	ENSBTAG00000016174	NCL	92	92.623
ENSBTAG00000050728	-	97	75.163	ENSBTAG00000051320	-	95	75.870
ENSBTAG00000050728	-	89	85.749	ENSBTAG00000026909	-	87	85.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000050728	-	89	90.164	ENSG00000115053	NCL	89	86.508	Homo_sapiens
ENSBTAG00000050728	-	81	90.984	ENSAMEG00000016289	NCL	54	90.984	Ailuropoda_melanoleuca
ENSBTAG00000050728	-	81	90.164	ENSANAG00000035814	-	54	90.164	Aotus_nancymaae
ENSBTAG00000050728	-	98	77.352	ENSANAG00000024378	-	98	71.335	Aotus_nancymaae
ENSBTAG00000050728	-	84	90.164	ENSCJAG00000013538	NCL	92	90.164	Callithrix_jacchus
ENSBTAG00000050728	-	81	90.984	ENSCAFG00000011037	NCL	54	90.984	Canis_familiaris
ENSBTAG00000050728	-	100	72.789	ENSCHIG00000012143	-	100	72.789	Capra_hircus
ENSBTAG00000050728	-	77	92.623	ENSCHIG00000010894	-	51	92.623	Capra_hircus
ENSBTAG00000050728	-	98	80.986	ENSCHIG00000026149	-	62	81.293	Capra_hircus
ENSBTAG00000050728	-	81	92.958	ENSCHIG00000021052	-	100	83.058	Capra_hircus
ENSBTAG00000050728	-	78	76.724	ENSTSYG00000036886	-	53	78.049	Carlito_syrichta
ENSBTAG00000050728	-	91	86.503	ENSTSYG00000029779	-	69	84.524	Carlito_syrichta
ENSBTAG00000050728	-	84	89.754	ENSTSYG00000004355	-	68	89.754	Carlito_syrichta
ENSBTAG00000050728	-	56	88.115	ENSCAPG00000009405	NCL	76	88.115	Cavia_aperea
ENSBTAG00000050728	-	87	88.115	ENSCPOG00000001034	NCL	75	88.115	Cavia_porcellus
ENSBTAG00000050728	-	81	90.164	ENSCCAG00000021040	-	92	90.164	Cebus_capucinus
ENSBTAG00000050728	-	82	67.179	ENSCCAG00000000551	-	93	67.810	Cebus_capucinus
ENSBTAG00000050728	-	89	90.164	ENSCATG00000037033	NCL	92	90.164	Cercocebus_atys
ENSBTAG00000050728	-	81	88.115	ENSCLAG00000013080	NCL	54	88.115	Chinchilla_lanigera
ENSBTAG00000050728	-	51	88.710	ENSCSAG00000006660	NCL	66	87.829	Chlorocebus_sabaeus
ENSBTAG00000050728	-	54	79.747	ENSCHOG00000012860	NCL	88	79.835	Choloepus_hoffmanni
ENSBTAG00000050728	-	58	82.661	ENSCANG00000036756	NCL	91	82.895	Colobus_angolensis_palliatus
ENSBTAG00000050728	-	90	75.709	ENSCGRG00001022350	-	95	75.309	Cricetulus_griseus_chok1gshd
ENSBTAG00000050728	-	87	86.420	ENSCGRG00001024315	-	91	86.420	Cricetulus_griseus_chok1gshd
ENSBTAG00000050728	-	79	86.420	ENSCGRG00000017894	-	88	86.420	Cricetulus_griseus_crigri
ENSBTAG00000050728	-	81	75.709	ENSCGRG00000000507	-	93	75.309	Cricetulus_griseus_crigri
ENSBTAG00000050728	-	92	86.192	ENSDNOG00000046347	-	91	86.192	Dasypus_novemcinctus
ENSBTAG00000050728	-	81	89.024	ENSDNOG00000010783	-	68	89.024	Dasypus_novemcinctus
ENSBTAG00000050728	-	89	82.857	ENSDORG00000012513	-	77	83.099	Dipodomys_ordii
ENSBTAG00000050728	-	92	76.056	ENSDORG00000023596	-	100	70.922	Dipodomys_ordii
ENSBTAG00000050728	-	53	86.364	ENSETEG00000014756	-	78	86.475	Echinops_telfairi
ENSBTAG00000050728	-	79	69.264	ENSETEG00000008139	-	66	68.966	Echinops_telfairi
ENSBTAG00000050728	-	62	55.410	ENSETEG00000008553	-	62	55.782	Echinops_telfairi
ENSBTAG00000050728	-	77	88.066	ENSETEG00000018937	-	85	88.066	Echinops_telfairi
ENSBTAG00000050728	-	82	90.984	ENSEASG00005008488	NCL	91	90.984	Equus_asinus_asinus
ENSBTAG00000050728	-	81	90.984	ENSECAG00000021868	NCL	54	90.984	Equus_caballus
ENSBTAG00000050728	-	81	90.574	ENSFCAG00000027622	NCL	54	90.574	Felis_catus
ENSBTAG00000050728	-	80	88.525	ENSFDAG00000014291	NCL	54	88.525	Fukomys_damarensis
ENSBTAG00000050728	-	89	90.164	ENSGGOG00000004300	NCL	100	81.405	Gorilla_gorilla
ENSBTAG00000050728	-	81	88.934	ENSHGLG00000002031	-	55	88.934	Heterocephalus_glaber_female
ENSBTAG00000050728	-	92	82.313	ENSHGLG00000011069	-	100	82.313	Heterocephalus_glaber_female
ENSBTAG00000050728	-	56	69.630	ENSHGLG00000005133	-	100	60.934	Heterocephalus_glaber_female
ENSBTAG00000050728	-	81	88.525	ENSHGLG00100014537	-	55	88.525	Heterocephalus_glaber_male
ENSBTAG00000050728	-	92	81.293	ENSHGLG00100000745	-	71	81.293	Heterocephalus_glaber_male
ENSBTAG00000050728	-	96	83.803	ENSJJAG00000016165	Ncl	83	83.803	Jaculus_jaculus
ENSBTAG00000050728	-	92	74.180	ENSLAFG00000013061	NCL	91	74.390	Loxodonta_africana
ENSBTAG00000050728	-	89	90.164	ENSMFAG00000040385	NCL	92	90.164	Macaca_fascicularis
ENSBTAG00000050728	-	85	90.164	ENSMMUG00000018094	NCL	92	90.164	Macaca_mulatta
ENSBTAG00000050728	-	89	90.164	ENSMNEG00000023839	NCL	91	90.164	Macaca_nemestrina
ENSBTAG00000050728	-	89	90.164	ENSMLEG00000028935	NCL	92	90.164	Mandrillus_leucophaeus
ENSBTAG00000050728	-	90	75.299	ENSMICG00000029975	-	100	73.129	Microcebus_murinus
ENSBTAG00000050728	-	85	90.164	ENSMICG00000002538	-	74	90.164	Microcebus_murinus
ENSBTAG00000050728	-	81	83.128	MGP_CAROLIEiJ_G0014362	Ncl	54	83.128	Mus_caroli
ENSBTAG00000050728	-	81	82.716	ENSMUSG00000026234	Ncl	54	82.716	Mus_musculus
ENSBTAG00000050728	-	81	82.716	MGP_PahariEiJ_G0027599	Ncl	54	82.716	Mus_pahari
ENSBTAG00000050728	-	81	82.716	MGP_SPRETEiJ_G0015164	Ncl	54	82.716	Mus_spretus
ENSBTAG00000050728	-	87	90.574	ENSMLUG00000014547	NCL	75	90.574	Myotis_lucifugus
ENSBTAG00000050728	-	75	76.068	ENSNGAG00000006188	-	61	72.028	Nannospalax_galili
ENSBTAG00000050728	-	81	86.420	ENSNGAG00000002454	-	53	86.420	Nannospalax_galili
ENSBTAG00000050728	-	69	83.158	ENSNLEG00000014107	-	55	84.043	Nomascus_leucogenys
ENSBTAG00000050728	-	81	85.950	ENSODEG00000002748	-	91	86.008	Octodon_degus
ENSBTAG00000050728	-	92	79.538	ENSODEG00000003281	-	62	83.168	Octodon_degus
ENSBTAG00000050728	-	100	67.089	ENSODEG00000002441	-	100	75.510	Octodon_degus
ENSBTAG00000050728	-	77	72.059	ENSODEG00000007803	-	57	71.324	Octodon_degus
ENSBTAG00000050728	-	82	89.300	ENSOCUG00000004312	NCL	100	87.459	Oryctolagus_cuniculus
ENSBTAG00000050728	-	81	88.934	ENSOGAG00000027852	NCL	56	88.934	Otolemur_garnettii
ENSBTAG00000050728	-	85	91.093	ENSOARG00000020709	-	75	91.093	Ovis_aries
ENSBTAG00000050728	-	53	74.900	ENSOARG00000004072	-	92	75.410	Ovis_aries
ENSBTAG00000050728	-	62	90.496	ENSOARG00000013710	-	51	90.574	Ovis_aries
ENSBTAG00000050728	-	85	90.164	ENSPPAG00000011619	NCL	100	81.405	Pan_paniscus
ENSBTAG00000050728	-	81	90.574	ENSPPRG00000012603	NCL	54	90.574	Panthera_pardus
ENSBTAG00000050728	-	80	90.574	ENSPTIG00000010393	NCL	53	90.574	Panthera_tigris_altaica
ENSBTAG00000050728	-	89	90.164	ENSPTRG00000013025	NCL	100	81.405	Pan_troglodytes
ENSBTAG00000050728	-	85	90.164	ENSPANG00000010292	NCL	92	90.164	Papio_anubis
ENSBTAG00000050728	-	89	90.164	ENSPPYG00000013265	NCL	54	90.164	Pongo_abelii
ENSBTAG00000050728	-	85	90.574	ENSPCOG00000003051	-	74	90.574	Propithecus_coquereli
ENSBTAG00000050728	-	90	86.777	ENSPCOG00000004160	-	94	86.885	Propithecus_coquereli
ENSBTAG00000050728	-	89	90.574	ENSPVAG00000000297	NCL	92	90.574	Pteropus_vampyrus
ENSBTAG00000050728	-	89	86.008	ENSRNOG00000018273	Ncl	81	86.008	Rattus_norvegicus
ENSBTAG00000050728	-	81	89.344	ENSRBIG00000035396	-	93	89.344	Rhinopithecus_bieti
ENSBTAG00000050728	-	80	90.164	ENSRBIG00000037525	-	56	90.164	Rhinopithecus_bieti
ENSBTAG00000050728	-	98	86.620	ENSRROG00000036103	-	99	86.869	Rhinopithecus_roxellana
ENSBTAG00000050728	-	85	90.164	ENSRROG00000028756	-	87	81.384	Rhinopithecus_roxellana
ENSBTAG00000050728	-	89	82.787	ENSSBOG00000027549	-	91	82.787	Saimiri_boliviensis_boliviensis
ENSBTAG00000050728	-	81	90.164	ENSSBOG00000029193	-	54	90.164	Saimiri_boliviensis_boliviensis
ENSBTAG00000050728	-	98	64.551	ENSSBOG00000023094	-	98	64.114	Saimiri_boliviensis_boliviensis
ENSBTAG00000050728	-	85	90.574	ENSSSCG00000016275	NCL	73	90.574	Sus_scrofa
ENSBTAG00000050728	-	71	83.505	ENSTBEG00000001546	-	85	72.131	Tupaia_belangeri
ENSBTAG00000050728	-	85	72.852	ENSTBEG00000002469	-	67	73.883	Tupaia_belangeri
ENSBTAG00000050728	-	50	89.754	ENSTTRG00000009094	NCL	91	89.754	Tursiops_truncatus
ENSBTAG00000050728	-	71	90.984	ENSUAMG00000005639	NCL	53	90.984	Ursus_americanus
ENSBTAG00000050728	-	81	90.984	ENSUMAG00000015789	NCL	54	90.984	Ursus_maritimus
ENSBTAG00000050728	-	80	86.977	ENSVPAG00000001796	NCL	51	86.977	Vicugna_pacos
ENSBTAG00000050728	-	81	90.164	ENSVVUG00000025564	NCL	57	90.164	Vulpes_vulpes