EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000050873 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 621 bases
Position: chr9:889605-890225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000057459	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000084541	-	621	-	ENSBTAP00000057459	206 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000050873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000050873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000050873	-	87	48.370	ENSBTAG00000044207	RAB2B	87	48.256
ENSBTAG00000050873	-	94	37.129	ENSBTAG00000000905	RAB6B	95	37.129
ENSBTAG00000050873	-	100	97.573	ENSBTAG00000009871	RAB18	88	97.573
ENSBTAG00000050873	-	85	42.614	ENSBTAG00000017604	RAB13	86	42.614
ENSBTAG00000050873	-	94	39.086	ENSBTAG00000006982	RAB5C	91	39.086
ENSBTAG00000050873	-	81	38.596	ENSBTAG00000010193	RAB7A	81	38.922
ENSBTAG00000050873	-	72	33.987	ENSBTAG00000002174	RERG	74	33.987
ENSBTAG00000050873	-	70	45.578	ENSBTAG00000034712	RAB33A	62	45.578
ENSBTAG00000050873	-	93	44.845	ENSBTAG00000016720	RAB1A	97	44.845
ENSBTAG00000050873	-	94	36.139	ENSBTAG00000000025	RAB6A	95	36.139
ENSBTAG00000050873	-	78	47.205	ENSBTAG00000002475	RAB11B	74	46.914
ENSBTAG00000050873	-	78	46.914	ENSBTAG00000018959	RAB11A	75	46.914
ENSBTAG00000050873	-	60	31.111	ENSBTAG00000002238	ARL2	70	31.111
ENSBTAG00000050873	-	87	38.021	ENSBTAG00000021525	-	86	38.021
ENSBTAG00000050873	-	82	47.337	ENSBTAG00000002417	RAB30	83	47.337
ENSBTAG00000050873	-	73	31.788	ENSBTAG00000009778	KRAS	87	32.317
ENSBTAG00000050873	-	93	40.609	ENSBTAG00000046385	RAB5A	90	40.609
ENSBTAG00000050873	-	85	30.114	ENSBTAG00000046644	HRAS	95	30.366
ENSBTAG00000050873	-	82	45.294	ENSBTAG00000003474	RAB15	79	45.294
ENSBTAG00000050873	-	70	34.228	ENSBTAG00000031861	RHEB	78	34.228
ENSBTAG00000050873	-	83	40.462	ENSBTAG00000019779	RAB39B	81	40.462
ENSBTAG00000050873	-	93	40.500	ENSBTAG00000014129	RAB5B	89	40.500
ENSBTAG00000050873	-	73	41.447	ENSBTAG00000048711	-	77	42.282
ENSBTAG00000050873	-	95	36.181	ENSBTAG00000019820	RAB9B	96	36.181
ENSBTAG00000050873	-	84	48.851	ENSBTAG00000022044	RAB35	100	45.588
ENSBTAG00000050873	-	79	48.171	ENSBTAG00000017803	RAB14	76	48.171
ENSBTAG00000050873	-	72	36.913	ENSBTAG00000004876	RABL2B	61	37.324
ENSBTAG00000050873	-	74	52.597	ENSBTAG00000000948	RAB2A	96	46.429
ENSBTAG00000050873	-	95	34.673	ENSBTAG00000010923	RAB9A	98	34.673
ENSBTAG00000050873	-	93	37.245	ENSBTAG00000003208	RAB33B	85	37.245
ENSBTAG00000050873	-	82	34.706	ENSBTAG00000001497	MRAS	96	32.692
ENSBTAG00000050873	-	78	49.383	ENSBTAG00000046485	RAB1B	54	49.383
ENSBTAG00000050873	-	73	32.450	ENSBTAG00000046797	NRAS	87	32.530
ENSBTAG00000050873	-	79	34.132	ENSBTAG00000018239	DNAJC27	61	34.132
ENSBTAG00000050873	-	81	48.521	ENSBTAG00000010356	RAB12	67	49.091
ENSBTAG00000050873	-	87	34.807	ENSBTAG00000005362	RAB23	76	34.807
ENSBTAG00000050873	-	93	39.378	ENSBTAG00000046533	RAB31	96	39.378
ENSBTAG00000050873	-	82	42.941	ENSBTAG00000018914	RAB25	79	42.941
ENSBTAG00000050873	-	95	39.796	ENSBTAG00000018053	RAB22A	99	39.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000050873	-	100	97.087	ENSG00000099246	RAB18	100	97.087	Homo_sapiens
ENSBTAG00000050873	-	99	82.927	ENSAPOG00000019881	rab18b	99	82.927	Acanthochromis_polyacanthus
ENSBTAG00000050873	-	100	84.322	ENSAMEG00000015990	RAB18	100	84.322	Ailuropoda_melanoleuca
ENSBTAG00000050873	-	99	84.390	ENSACIG00000008102	rab18b	99	84.390	Amphilophus_citrinellus
ENSBTAG00000050873	-	99	82.439	ENSAOCG00000013479	rab18b	99	82.439	Amphiprion_ocellaris
ENSBTAG00000050873	-	99	81.951	ENSAPEG00000022923	rab18b	99	81.951	Amphiprion_percula
ENSBTAG00000050873	-	99	81.463	ENSATEG00000002952	rab18b	99	81.463	Anabas_testudineus
ENSBTAG00000050873	-	100	97.087	ENSANAG00000035856	RAB18	100	97.087	Aotus_nancymaae
ENSBTAG00000050873	-	99	83.415	ENSACLG00000015289	rab18b	99	83.415	Astatotilapia_calliptera
ENSBTAG00000050873	-	100	84.951	ENSAMXG00000042073	rab18b	100	84.951	Astyanax_mexicanus
ENSBTAG00000050873	-	100	97.087	ENSCJAG00000045749	RAB18	100	97.087	Callithrix_jacchus
ENSBTAG00000050873	-	100	96.602	ENSCAFG00020003253	RAB18	100	96.602	Canis_lupus_dingo
ENSBTAG00000050873	-	100	97.573	ENSCHIG00000008749	RAB18	100	97.573	Capra_hircus
ENSBTAG00000050873	-	100	96.117	ENSTSYG00000013092	RAB18	100	96.117	Carlito_syrichta
ENSBTAG00000050873	-	100	95.631	ENSCPOG00000032827	RAB18	100	95.631	Cavia_porcellus
ENSBTAG00000050873	-	100	97.087	ENSCCAG00000006762	RAB18	100	97.087	Cebus_capucinus
ENSBTAG00000050873	-	100	97.087	ENSCATG00000009672	RAB18	100	97.087	Cercocebus_atys
ENSBTAG00000050873	-	100	97.087	ENSCSAG00000011749	RAB18	100	97.087	Chlorocebus_sabaeus
ENSBTAG00000050873	-	100	97.087	ENSCANG00000035397	RAB18	100	97.087	Colobus_angolensis_palliatus
ENSBTAG00000050873	-	100	96.117	ENSCGRG00001017519	Rab18	100	96.117	Cricetulus_griseus_chok1gshd
ENSBTAG00000050873	-	100	96.117	ENSCGRG00000017201	Rab18	100	96.117	Cricetulus_griseus_crigri
ENSBTAG00000050873	-	95	82.564	ENSCSEG00000016803	rab18b	99	82.564	Cynoglossus_semilaevis
ENSBTAG00000050873	-	100	85.437	ENSDARG00000098344	rab18b	100	85.437	Danio_rerio
ENSBTAG00000050873	-	62	87.597	ENSDNOG00000038845	-	85	87.597	Dasypus_novemcinctus
ENSBTAG00000050873	-	100	97.087	ENSDNOG00000047713	RAB18	100	97.087	Dasypus_novemcinctus
ENSBTAG00000050873	-	100	95.631	ENSDORG00000028596	-	100	95.631	Dipodomys_ordii
ENSBTAG00000050873	-	84	89.655	ENSDORG00000029360	-	83	89.655	Dipodomys_ordii
ENSBTAG00000050873	-	100	96.602	ENSEASG00005007164	RAB18	100	96.602	Equus_asinus_asinus
ENSBTAG00000050873	-	100	96.602	ENSECAG00000017521	RAB18	88	96.602	Equus_caballus
ENSBTAG00000050873	-	99	83.981	ENSELUG00000016450	rab18b	99	83.981	Esox_lucius
ENSBTAG00000050873	-	100	96.117	ENSFCAG00000027161	RAB18	100	96.117	Felis_catus
ENSBTAG00000050873	-	93	94.792	ENSFALG00000007160	RAB18	100	93.237	Ficedula_albicollis
ENSBTAG00000050873	-	99	83.415	ENSFHEG00000020035	rab18b	99	83.415	Fundulus_heteroclitus
ENSBTAG00000050873	-	99	77.073	ENSGMOG00000016608	rab18b	99	77.073	Gadus_morhua
ENSBTAG00000050873	-	100	94.175	ENSGALG00000007435	RAB18	100	94.175	Gallus_gallus
ENSBTAG00000050873	-	99	83.415	ENSGAFG00000008560	rab18b	99	83.415	Gambusia_affinis
ENSBTAG00000050873	-	99	82.927	ENSGACG00000016395	rab18b	99	82.927	Gasterosteus_aculeatus
ENSBTAG00000050873	-	100	97.087	ENSGGOG00000008086	RAB18	100	97.087	Gorilla_gorilla
ENSBTAG00000050873	-	99	83.415	ENSHBUG00000003696	rab18b	99	83.415	Haplochromis_burtoni
ENSBTAG00000050873	-	100	94.175	ENSHGLG00000004365	RAB18	100	94.175	Heterocephalus_glaber_female
ENSBTAG00000050873	-	99	79.024	ENSHGLG00000007301	-	95	79.024	Heterocephalus_glaber_female
ENSBTAG00000050873	-	100	94.175	ENSHGLG00100013089	-	100	94.175	Heterocephalus_glaber_male
ENSBTAG00000050873	-	99	79.024	ENSHGLG00100009117	-	95	79.024	Heterocephalus_glaber_male
ENSBTAG00000050873	-	99	82.927	ENSHCOG00000002217	rab18b	99	82.927	Hippocampus_comes
ENSBTAG00000050873	-	100	82.524	ENSIPUG00000010859	rab18b	100	82.524	Ictalurus_punctatus
ENSBTAG00000050873	-	100	95.631	ENSSTOG00000014560	-	100	95.631	Ictidomys_tridecemlineatus
ENSBTAG00000050873	-	99	83.415	ENSKMAG00000007364	rab18b	99	83.415	Kryptolebias_marmoratus
ENSBTAG00000050873	-	99	84.878	ENSLBEG00000019428	rab18b	99	84.878	Labrus_bergylta
ENSBTAG00000050873	-	100	78.261	ENSLACG00000011256	rab18b	100	78.261	Latimeria_chalumnae
ENSBTAG00000050873	-	100	96.117	ENSLAFG00000015582	RAB18	100	96.117	Loxodonta_africana
ENSBTAG00000050873	-	100	97.087	ENSMFAG00000006430	RAB18	100	97.087	Macaca_fascicularis
ENSBTAG00000050873	-	100	95.146	ENSMMUG00000046971	RAB18	74	95.146	Macaca_mulatta
ENSBTAG00000050873	-	100	97.087	ENSMNEG00000038180	RAB18	100	97.087	Macaca_nemestrina
ENSBTAG00000050873	-	100	97.087	ENSMLEG00000033595	RAB18	100	97.087	Mandrillus_leucophaeus
ENSBTAG00000050873	-	100	81.553	ENSMAMG00000018445	rab18b	100	81.553	Mastacembelus_armatus
ENSBTAG00000050873	-	99	83.415	ENSMZEG00005008244	rab18b	99	83.415	Maylandia_zebra
ENSBTAG00000050873	-	94	88.083	ENSMAUG00000020698	-	100	82.039	Mesocricetus_auratus
ENSBTAG00000050873	-	100	96.602	ENSMICG00000017280	RAB18	100	96.602	Microcebus_murinus
ENSBTAG00000050873	-	100	96.117	ENSMOCG00000013044	Rab18	100	96.117	Microtus_ochrogaster
ENSBTAG00000050873	-	99	70.370	ENSMMOG00000017849	rab18b	99	70.370	Mola_mola
ENSBTAG00000050873	-	100	94.175	ENSMODG00000008253	RAB18	100	94.175	Monodelphis_domestica
ENSBTAG00000050873	-	100	82.524	ENSMODG00000024936	-	100	82.524	Monodelphis_domestica
ENSBTAG00000050873	-	99	83.415	ENSMALG00000005069	rab18b	99	83.415	Monopterus_albus
ENSBTAG00000050873	-	100	96.117	MGP_CAROLIEiJ_G0021978	Rab18	100	96.117	Mus_caroli
ENSBTAG00000050873	-	100	96.117	ENSMUSG00000073639	Rab18	100	96.117	Mus_musculus
ENSBTAG00000050873	-	100	96.117	MGP_PahariEiJ_G0018716	Rab18	100	96.117	Mus_pahari
ENSBTAG00000050873	-	100	96.117	MGP_SPRETEiJ_G0022894	Rab18	100	96.117	Mus_spretus
ENSBTAG00000050873	-	100	96.602	ENSMPUG00000010592	RAB18	100	96.602	Mustela_putorius_furo
ENSBTAG00000050873	-	100	84.322	ENSMLUG00000027295	RAB18	100	84.322	Myotis_lucifugus
ENSBTAG00000050873	-	100	96.602	ENSNGAG00000001465	Rab18	100	96.602	Nannospalax_galili
ENSBTAG00000050873	-	99	82.927	ENSNBRG00000008137	rab18b	99	82.927	Neolamprologus_brichardi
ENSBTAG00000050873	-	100	97.087	ENSNLEG00000016970	RAB18	100	97.087	Nomascus_leucogenys
ENSBTAG00000050873	-	100	95.631	ENSODEG00000004150	-	100	95.631	Octodon_degus
ENSBTAG00000050873	-	99	82.927	ENSONIG00000018673	rab18b	99	82.927	Oreochromis_niloticus
ENSBTAG00000050873	-	100	94.660	ENSOANG00000021391	RAB18	100	94.660	Ornithorhynchus_anatinus
ENSBTAG00000050873	-	100	95.146	ENSOCUG00000022307	RAB18	100	95.146	Oryctolagus_cuniculus
ENSBTAG00000050873	-	99	82.439	ENSORLG00000009609	rab18b	99	82.439	Oryzias_latipes
ENSBTAG00000050873	-	99	82.439	ENSORLG00020011590	rab18b	99	82.439	Oryzias_latipes_hni
ENSBTAG00000050873	-	99	82.439	ENSORLG00015007182	rab18b	99	82.439	Oryzias_latipes_hsok
ENSBTAG00000050873	-	99	82.439	ENSOMEG00000007546	rab18b	99	82.439	Oryzias_melastigma
ENSBTAG00000050873	-	93	96.875	ENSOGAG00000028015	RAB18	100	96.117	Otolemur_garnettii
ENSBTAG00000050873	-	100	97.573	ENSOARG00000016208	RAB18	100	97.573	Ovis_aries
ENSBTAG00000050873	-	100	97.087	ENSPPAG00000041625	RAB18	100	97.087	Pan_paniscus
ENSBTAG00000050873	-	100	96.117	ENSPPRG00000010314	RAB18	100	96.117	Panthera_pardus
ENSBTAG00000050873	-	100	96.117	ENSPTIG00000011667	RAB18	100	96.117	Panthera_tigris_altaica
ENSBTAG00000050873	-	100	97.087	ENSPTRG00000002384	RAB18	100	97.087	Pan_troglodytes
ENSBTAG00000050873	-	100	97.087	ENSPANG00000023005	RAB18	100	97.087	Papio_anubis
ENSBTAG00000050873	-	98	82.843	ENSPMAG00000005322	rab18b	98	82.843	Petromyzon_marinus
ENSBTAG00000050873	-	100	94.175	ENSPCIG00000028705	-	88	94.175	Phascolarctos_cinereus
ENSBTAG00000050873	-	99	83.415	ENSPFOG00000013491	rab18b	99	83.415	Poecilia_formosa
ENSBTAG00000050873	-	99	83.415	ENSPLAG00000019136	rab18b	99	83.415	Poecilia_latipinna
ENSBTAG00000050873	-	99	83.415	ENSPMEG00000008223	rab18b	99	83.415	Poecilia_mexicana
ENSBTAG00000050873	-	100	97.087	ENSPPYG00000002172	RAB18	100	97.087	Pongo_abelii
ENSBTAG00000050873	-	100	96.602	ENSPCOG00000018906	RAB18	100	96.602	Propithecus_coquereli
ENSBTAG00000050873	-	99	83.415	ENSPNYG00000001751	rab18b	99	83.415	Pundamilia_nyererei
ENSBTAG00000050873	-	100	85.024	ENSPNAG00000002404	rab18b	100	85.024	Pygocentrus_nattereri
ENSBTAG00000050873	-	100	95.631	ENSRNOG00000018972	Rab18	100	95.631	Rattus_norvegicus
ENSBTAG00000050873	-	100	96.602	ENSRBIG00000035948	RAB18	100	96.602	Rhinopithecus_bieti
ENSBTAG00000050873	-	100	97.087	ENSRROG00000040563	RAB18	100	97.087	Rhinopithecus_roxellana
ENSBTAG00000050873	-	100	94.660	ENSSHAG00000007613	RAB18	100	94.660	Sarcophilus_harrisii
ENSBTAG00000050873	-	99	81.951	ENSSMAG00000011814	rab18b	99	81.951	Scophthalmus_maximus
ENSBTAG00000050873	-	99	82.927	ENSSDUG00000005960	rab18b	99	82.927	Seriola_dumerili
ENSBTAG00000050873	-	99	82.927	ENSSLDG00000006014	rab18b	99	82.927	Seriola_lalandi_dorsalis
ENSBTAG00000050873	-	99	82.439	ENSSPAG00000020875	rab18b	99	82.439	Stegastes_partitus
ENSBTAG00000050873	-	100	97.573	ENSSSCG00000028655	RAB18	100	97.573	Sus_scrofa
ENSBTAG00000050873	-	93	83.105	ENSTGUG00000001105	-	100	82.479	Taeniopygia_guttata
ENSBTAG00000050873	-	99	83.415	ENSTRUG00000004283	rab18b	99	83.902	Takifugu_rubripes
ENSBTAG00000050873	-	99	81.463	ENSTNIG00000007882	rab18b	99	81.463	Tetraodon_nigroviridis
ENSBTAG00000050873	-	100	96.602	ENSVVUG00000001705	RAB18	100	96.602	Vulpes_vulpes
ENSBTAG00000050873	-	99	83.902	ENSXMAG00000006945	rab18b	99	84.390	Xiphophorus_maculatus