EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000051439 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 9554 bases
Position: chr7:20569599-20579152
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000071377	RRM_1	PF00076.22	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000072223	-	2432	-	ENSBTAP00000071377	157 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000051439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000051439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000051439	-	75	40.367	ENSBTAG00000000613	ELAVL1	79	40.367
ENSBTAG00000051439	-	50	34.615	ENSBTAG00000025848	RBM3	74	38.806
ENSBTAG00000051439	-	56	39.744	ENSBTAG00000014412	ELAVL3	71	39.496
ENSBTAG00000051439	-	71	37.975	ENSBTAG00000046348	ELAVL2	72	37.975
ENSBTAG00000051439	-	73	36.709	ENSBTAG00000021046	ELAVL4	73	36.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000051439	-	57	91.111	ENSAMXG00000034719	-	73	91.111	Astyanax_mexicanus
ENSBTAG00000051439	-	57	86.667	ENSCHIG00000009150	-	74	86.667	Capra_hircus
ENSBTAG00000051439	-	57	86.667	ENSECAG00000036983	-	69	86.667	Equus_caballus
ENSBTAG00000051439	-	58	90.110	ENSGALG00000048972	-	83	90.110	Gallus_gallus
ENSBTAG00000051439	-	51	61.250	ENSNBRG00000010123	-	75	61.250	Neolamprologus_brichardi
ENSBTAG00000051439	-	57	86.667	ENSPTIG00000005413	-	69	86.667	Panthera_tigris_altaica
ENSBTAG00000051439	-	57	91.111	ENSPKIG00000024667	-	73	91.111	Paramormyrops_kingsleyae
ENSBTAG00000051439	-	57	88.889	ENSPLAG00000015969	-	74	88.889	Poecilia_latipinna
ENSBTAG00000051439	-	57	91.111	ENSPLAG00000013524	-	73	91.111	Poecilia_latipinna
ENSBTAG00000051439	-	57	88.889	ENSPLAG00000000224	-	74	88.889	Poecilia_latipinna
ENSBTAG00000051439	-	57	91.111	ENSPMEG00000011603	-	73	91.111	Poecilia_mexicana
ENSBTAG00000051439	-	57	86.667	ENSUAMG00000025729	-	74	86.667	Ursus_americanus
ENSBTAG00000051439	-	57	86.667	ENSUMAG00000008820	-	74	86.667	Ursus_maritimus
ENSBTAG00000051439	-	57	86.667	ENSVVUG00000018262	-	69	86.667	Vulpes_vulpes
ENSBTAG00000051439	-	61	93.939	ENSVVUG00000003252	-	85	93.939	Vulpes_vulpes