EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000052337 (Gene tree)
Gene ID: 286884
Gene Symbol: RPS29
Alias: -
Full Name: ribosomal protein S29
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 2004 bases
Position: chr10:42627501-42629504
Accession: 286884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000061344	Ribosomal_S14	PF00253.21	4.9e-15	1	1
ENSBTAP00000063968	Ribosomal_S14	PF00253.21	7.7e-15	1	1
ENSBTAP00000064191	Ribosomal_S14	PF00253.21	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000077396	-	292	-	ENSBTAP00000061344	56 (aa)	-	P62276
ENSBTAT00000087077	-	889	-	ENSBTAP00000063968	66 (aa)	-	-
ENSBTAT00000069821	-	480	-	ENSBTAP00000064191	98 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000052337's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000052337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000052337	RPS29	100	98.214	ENSBTAG00000025666	RPS29	100	98.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000052337	RPS29	100	92.857	ENSACIG00000003518	rps29	73	96.364	Amphilophus_citrinellus
ENSBTAG00000052337	RPS29	98	100.000	ENSANAG00000024423	-	100	100.000	Aotus_nancymaae
ENSBTAG00000052337	RPS29	89	68.000	ENSACLG00000000915	rps29	64	66.667	Astatotilapia_calliptera
ENSBTAG00000052337	RPS29	100	91.071	ENSCJAG00000031814	-	100	91.071	Callithrix_jacchus
ENSBTAG00000052337	RPS29	100	100.000	ENSCJAG00000039096	-	100	100.000	Callithrix_jacchus
ENSBTAG00000052337	RPS29	98	78.182	ENSCAFG00020021989	-	84	60.440	Canis_lupus_dingo
ENSBTAG00000052337	RPS29	100	92.857	ENSCAFG00020003021	-	100	92.857	Canis_lupus_dingo
ENSBTAG00000052337	RPS29	100	83.929	ENSCAFG00020002956	-	100	83.929	Canis_lupus_dingo
ENSBTAG00000052337	RPS29	100	94.643	ENSCHIG00000010682	-	100	94.643	Capra_hircus
ENSBTAG00000052337	RPS29	100	100.000	ENSTSYG00000030415	-	100	100.000	Carlito_syrichta
ENSBTAG00000052337	RPS29	100	76.786	ENSTSYG00000012410	-	100	76.786	Carlito_syrichta
ENSBTAG00000052337	RPS29	100	100.000	ENSCPOG00000032637	-	100	100.000	Cavia_porcellus
ENSBTAG00000052337	RPS29	100	98.214	ENSCCAG00000019847	-	100	98.214	Cebus_capucinus
ENSBTAG00000052337	RPS29	100	98.214	ENSCCAG00000032225	-	100	98.214	Cebus_capucinus
ENSBTAG00000052337	RPS29	100	100.000	ENSCCAG00000001210	-	100	100.000	Cebus_capucinus
ENSBTAG00000052337	RPS29	100	100.000	ENSCCAG00000032090	-	100	100.000	Cebus_capucinus
ENSBTAG00000052337	RPS29	100	100.000	ENSCCAG00000019033	-	100	100.000	Cebus_capucinus
ENSBTAG00000052337	RPS29	100	98.214	ENSCCAG00000020608	-	100	98.214	Cebus_capucinus
ENSBTAG00000052337	RPS29	100	71.429	ENSCATG00000041319	-	100	71.429	Cercocebus_atys
ENSBTAG00000052337	RPS29	100	100.000	ENSCATG00000017816	-	100	100.000	Cercocebus_atys
ENSBTAG00000052337	RPS29	100	100.000	ENSCATG00000011469	-	100	100.000	Cercocebus_atys
ENSBTAG00000052337	RPS29	100	100.000	ENSCSAG00000015276	-	100	100.000	Chlorocebus_sabaeus
ENSBTAG00000052337	RPS29	91	76.471	ENSCHOG00000011358	-	93	76.471	Choloepus_hoffmanni
ENSBTAG00000052337	RPS29	100	100.000	ENSCPBG00000018320	-	100	100.000	Chrysemys_picta_bellii
ENSBTAG00000052337	RPS29	100	91.071	ENSCPBG00000019385	-	100	91.071	Chrysemys_picta_bellii
ENSBTAG00000052337	RPS29	98	76.364	ENSCPBG00000015078	-	86	69.014	Chrysemys_picta_bellii
ENSBTAG00000052337	RPS29	100	100.000	ENSCANG00000019407	-	100	100.000	Colobus_angolensis_palliatus
ENSBTAG00000052337	RPS29	100	100.000	ENSCANG00000037526	-	100	100.000	Colobus_angolensis_palliatus
ENSBTAG00000052337	RPS29	100	98.214	ENSCANG00000010019	-	100	98.214	Colobus_angolensis_palliatus
ENSBTAG00000052337	RPS29	100	98.214	ENSCGRG00001001537	-	92	98.214	Cricetulus_griseus_chok1gshd
ENSBTAG00000052337	RPS29	100	87.500	ENSCGRG00001005461	-	100	87.500	Cricetulus_griseus_chok1gshd
ENSBTAG00000052337	RPS29	100	89.286	ENSCGRG00001010167	-	100	89.286	Cricetulus_griseus_chok1gshd
ENSBTAG00000052337	RPS29	100	100.000	ENSCGRG00001020113	Rps29	100	100.000	Cricetulus_griseus_chok1gshd
ENSBTAG00000052337	RPS29	100	82.143	ENSCGRG00001000990	-	66	82.143	Cricetulus_griseus_chok1gshd
ENSBTAG00000052337	RPS29	100	89.286	ENSCGRG00000019055	-	100	89.286	Cricetulus_griseus_crigri
ENSBTAG00000052337	RPS29	100	73.214	ENSCGRG00000009208	-	100	73.214	Cricetulus_griseus_crigri
ENSBTAG00000052337	RPS29	100	98.214	ENSCGRG00000018591	-	92	98.214	Cricetulus_griseus_crigri
ENSBTAG00000052337	RPS29	100	82.143	ENSCGRG00000019197	-	66	82.143	Cricetulus_griseus_crigri
ENSBTAG00000052337	RPS29	100	87.500	ENSCGRG00000019460	-	100	87.500	Cricetulus_griseus_crigri
ENSBTAG00000052337	RPS29	98	96.364	ENSCSEG00000001818	rps29	60	98.182	Cynoglossus_semilaevis
ENSBTAG00000052337	RPS29	100	96.429	ENSDARG00000041232	rps29	100	96.429	Danio_rerio
ENSBTAG00000052337	RPS29	100	85.000	ENSDORG00000013874	-	100	85.000	Dipodomys_ordii
ENSBTAG00000052337	RPS29	100	96.429	ENSDORG00000028731	-	100	96.429	Dipodomys_ordii
ENSBTAG00000052337	RPS29	100	91.071	ENSDORG00000026532	-	100	91.071	Dipodomys_ordii
ENSBTAG00000052337	RPS29	100	83.929	ENSEBUG00000011966	rps29	76	76.923	Eptatretus_burgeri
ENSBTAG00000052337	RPS29	98	96.364	ENSEASG00005007821	-	94	77.215	Equus_asinus_asinus
ENSBTAG00000052337	RPS29	98	67.273	ENSEASG00005020582	-	95	67.273	Equus_asinus_asinus
ENSBTAG00000052337	RPS29	98	96.364	ENSECAG00000011782	RPS29	94	77.215	Equus_caballus
ENSBTAG00000052337	RPS29	100	80.357	ENSFCAG00000024162	-	100	80.357	Felis_catus
ENSBTAG00000052337	RPS29	100	100.000	ENSFALG00000001808	-	92	100.000	Ficedula_albicollis
ENSBTAG00000052337	RPS29	100	100.000	ENSFALG00000001738	-	92	100.000	Ficedula_albicollis
ENSBTAG00000052337	RPS29	100	98.214	ENSGACG00000012858	rps29	100	98.214	Gasterosteus_aculeatus
ENSBTAG00000052337	RPS29	84	95.745	ENSGAGG00000025088	-	57	95.745	Gopherus_agassizii
ENSBTAG00000052337	RPS29	98	85.455	ENSGAGG00000016743	-	92	85.455	Gopherus_agassizii
ENSBTAG00000052337	RPS29	100	96.429	ENSGGOG00000042896	-	100	96.429	Gorilla_gorilla
ENSBTAG00000052337	RPS29	100	100.000	ENSGGOG00000042996	-	100	100.000	Gorilla_gorilla
ENSBTAG00000052337	RPS29	100	96.429	ENSHBUG00000018115	rps29	100	96.429	Haplochromis_burtoni
ENSBTAG00000052337	RPS29	100	80.357	ENSJJAG00000011627	-	100	80.357	Jaculus_jaculus
ENSBTAG00000052337	RPS29	100	100.000	ENSLAFG00000031145	-	100	100.000	Loxodonta_africana
ENSBTAG00000052337	RPS29	100	100.000	ENSMFAG00000026635	-	100	100.000	Macaca_fascicularis
ENSBTAG00000052337	RPS29	100	87.500	ENSMMUG00000043202	-	100	87.500	Macaca_mulatta
ENSBTAG00000052337	RPS29	100	98.214	ENSMMUG00000040278	-	100	98.214	Macaca_mulatta
ENSBTAG00000052337	RPS29	100	92.857	ENSMMUG00000032153	-	100	92.857	Macaca_mulatta
ENSBTAG00000052337	RPS29	100	100.000	ENSMMUG00000008939	-	100	100.000	Macaca_mulatta
ENSBTAG00000052337	RPS29	100	100.000	ENSMMUG00000043502	-	100	100.000	Macaca_mulatta
ENSBTAG00000052337	RPS29	100	100.000	ENSMNEG00000027952	-	100	100.000	Macaca_nemestrina
ENSBTAG00000052337	RPS29	100	100.000	ENSMNEG00000037893	-	100	100.000	Macaca_nemestrina
ENSBTAG00000052337	RPS29	100	98.214	ENSMLEG00000026733	-	100	98.214	Mandrillus_leucophaeus
ENSBTAG00000052337	RPS29	100	96.429	ENSMZEG00005012261	rps29	100	96.429	Maylandia_zebra
ENSBTAG00000052337	RPS29	100	100.000	ENSMGAG00000013705	-	100	100.000	Meleagris_gallopavo
ENSBTAG00000052337	RPS29	63	100.000	ENSMAUG00000000899	-	100	100.000	Mesocricetus_auratus
ENSBTAG00000052337	RPS29	100	89.286	ENSMAUG00000005362	-	100	89.286	Mesocricetus_auratus
ENSBTAG00000052337	RPS29	98	87.273	ENSMAUG00000019410	-	100	87.273	Mesocricetus_auratus
ENSBTAG00000052337	RPS29	100	96.429	ENSMICG00000041582	-	100	96.429	Microcebus_murinus
ENSBTAG00000052337	RPS29	100	100.000	ENSMICG00000045654	-	100	100.000	Microcebus_murinus
ENSBTAG00000052337	RPS29	100	100.000	ENSMOCG00000017681	Rps29	100	100.000	Microtus_ochrogaster
ENSBTAG00000052337	RPS29	96	100.000	ENSMMOG00000005119	rps29	51	100.000	Mola_mola
ENSBTAG00000052337	RPS29	100	89.286	ENSMODG00000025305	-	100	89.286	Monodelphis_domestica
ENSBTAG00000052337	RPS29	100	100.000	MGP_CAROLIEiJ_G0017795	-	100	100.000	Mus_caroli
ENSBTAG00000052337	RPS29	100	100.000	ENSMUSG00000034892	Rps29	100	100.000	Mus_musculus
ENSBTAG00000052337	RPS29	100	100.000	MGP_PahariEiJ_G0029551	-	100	100.000	Mus_pahari
ENSBTAG00000052337	RPS29	100	100.000	MGP_SPRETEiJ_G0018641	Rps29	100	100.000	Mus_spretus
ENSBTAG00000052337	RPS29	100	91.071	MGP_SPRETEiJ_G0019597	-	92	91.071	Mus_spretus
ENSBTAG00000052337	RPS29	100	91.071	ENSMLUG00000029871	-	100	91.071	Myotis_lucifugus
ENSBTAG00000052337	RPS29	100	100.000	ENSMLUG00000025262	-	100	100.000	Myotis_lucifugus
ENSBTAG00000052337	RPS29	98	100.000	ENSMLUG00000025007	-	100	100.000	Myotis_lucifugus
ENSBTAG00000052337	RPS29	100	80.357	ENSNGAG00000011632	-	100	80.357	Nannospalax_galili
ENSBTAG00000052337	RPS29	100	100.000	ENSNGAG00000013159	Rps29	100	100.000	Nannospalax_galili
ENSBTAG00000052337	RPS29	100	92.857	ENSNBRG00000021854	rps29	69	96.364	Neolamprologus_brichardi
ENSBTAG00000052337	RPS29	100	98.214	ENSNLEG00000018259	-	100	98.214	Nomascus_leucogenys
ENSBTAG00000052337	RPS29	100	78.571	ENSNLEG00000031810	-	64	78.571	Nomascus_leucogenys
ENSBTAG00000052337	RPS29	100	100.000	ENSODEG00000019220	-	100	100.000	Octodon_degus
ENSBTAG00000052337	RPS29	100	96.429	ENSODEG00000019960	-	100	96.429	Octodon_degus
ENSBTAG00000052337	RPS29	93	94.231	ENSODEG00000019249	-	100	94.231	Octodon_degus
ENSBTAG00000052337	RPS29	100	92.857	ENSODEG00000019457	-	100	92.857	Octodon_degus
ENSBTAG00000052337	RPS29	100	100.000	ENSODEG00000018519	-	100	100.000	Octodon_degus
ENSBTAG00000052337	RPS29	100	96.429	ENSONIG00000000829	rps29	100	96.429	Oreochromis_niloticus
ENSBTAG00000052337	RPS29	100	100.000	ENSOCUG00000027423	RPS29	100	100.000	Oryctolagus_cuniculus
ENSBTAG00000052337	RPS29	98	96.364	ENSOMEG00000010831	rps29	70	98.214	Oryzias_melastigma
ENSBTAG00000052337	RPS29	100	89.286	ENSOGAG00000032475	-	100	89.286	Otolemur_garnettii
ENSBTAG00000052337	RPS29	100	89.286	ENSOGAG00000033843	-	100	89.286	Otolemur_garnettii
ENSBTAG00000052337	RPS29	100	91.071	ENSOARG00000007891	-	92	91.071	Ovis_aries
ENSBTAG00000052337	RPS29	100	100.000	ENSPPRG00000022391	-	100	100.000	Panthera_pardus
ENSBTAG00000052337	RPS29	100	78.571	ENSPPRG00000017352	-	100	78.571	Panthera_pardus
ENSBTAG00000052337	RPS29	100	98.214	ENSPPRG00000011061	-	100	98.214	Panthera_pardus
ENSBTAG00000052337	RPS29	100	100.000	ENSPTIG00000006207	-	100	100.000	Panthera_tigris_altaica
ENSBTAG00000052337	RPS29	100	89.286	ENSPANG00000029212	-	100	89.286	Papio_anubis
ENSBTAG00000052337	RPS29	100	100.000	ENSPANG00000023730	-	100	100.000	Papio_anubis
ENSBTAG00000052337	RPS29	100	100.000	ENSPANG00000033247	-	100	100.000	Papio_anubis
ENSBTAG00000052337	RPS29	100	100.000	ENSPPYG00000005785	RPS29	100	100.000	Pongo_abelii
ENSBTAG00000052337	RPS29	100	100.000	ENSPCOG00000024671	-	100	100.000	Propithecus_coquereli
ENSBTAG00000052337	RPS29	100	85.714	ENSPCOG00000015576	-	100	85.714	Propithecus_coquereli
ENSBTAG00000052337	RPS29	100	100.000	ENSRNOG00000032542	LOC108351482	100	100.000	Rattus_norvegicus
ENSBTAG00000052337	RPS29	100	100.000	ENSRNOG00000028939	Rps29	100	100.000	Rattus_norvegicus
ENSBTAG00000052337	RPS29	100	100.000	ENSRNOG00000004196	LOC108350501	100	100.000	Rattus_norvegicus
ENSBTAG00000052337	RPS29	100	100.000	ENSRNOG00000029443	LOC108352650	100	100.000	Rattus_norvegicus
ENSBTAG00000052337	RPS29	100	100.000	ENSRBIG00000016462	-	100	100.000	Rhinopithecus_bieti
ENSBTAG00000052337	RPS29	100	98.214	ENSRBIG00000020563	-	100	98.214	Rhinopithecus_bieti
ENSBTAG00000052337	RPS29	100	100.000	ENSRBIG00000017110	-	100	100.000	Rhinopithecus_bieti
ENSBTAG00000052337	RPS29	100	98.214	ENSRBIG00000011261	-	100	98.214	Rhinopithecus_bieti
ENSBTAG00000052337	RPS29	100	98.214	ENSRBIG00000007567	-	100	98.214	Rhinopithecus_bieti
ENSBTAG00000052337	RPS29	100	100.000	ENSRROG00000037175	-	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	100	98.214	ENSRROG00000015879	-	100	98.214	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	100	100.000	ENSRROG00000009633	-	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	100	100.000	ENSRROG00000020854	-	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	100	96.429	ENSRROG00000017887	-	100	96.429	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	100	100.000	ENSRROG00000011987	-	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	100	100.000	ENSRROG00000009364	-	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000052337	RPS29	63	100.000	ENSSBOG00000029046	-	66	100.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000052337	RPS29	100	98.214	ENSSBOG00000012724	-	100	98.214	Saimiri_boliviensis_boliviensis
ENSBTAG00000052337	RPS29	100	96.429	ENSSBOG00000009349	-	100	96.429	Saimiri_boliviensis_boliviensis
ENSBTAG00000052337	RPS29	100	98.214	ENSSBOG00000019207	-	100	98.214	Saimiri_boliviensis_boliviensis
ENSBTAG00000052337	RPS29	98	96.364	ENSSFOG00015000394	-	80	91.667	Scleropages_formosus
ENSBTAG00000052337	RPS29	100	94.643	ENSSDUG00000009578	rps29	62	98.182	Seriola_dumerili
ENSBTAG00000052337	RPS29	100	100.000	ENSSSCG00000038507	-	100	100.000	Sus_scrofa
ENSBTAG00000052337	RPS29	100	83.929	ENSSSCG00000037150	-	100	83.929	Sus_scrofa
ENSBTAG00000052337	RPS29	100	78.571	ENSSSCG00000001855	-	100	78.571	Sus_scrofa
ENSBTAG00000052337	RPS29	100	87.500	ENSSSCG00000035779	-	100	87.500	Sus_scrofa
ENSBTAG00000052337	RPS29	100	94.643	ENSUAMG00000016993	-	100	94.643	Ursus_americanus
ENSBTAG00000052337	RPS29	71	87.500	ENSUAMG00000005201	-	75	87.500	Ursus_americanus
ENSBTAG00000052337	RPS29	100	100.000	ENSUAMG00000022821	-	100	100.000	Ursus_americanus
ENSBTAG00000052337	RPS29	100	80.357	ENSUAMG00000003050	-	100	80.357	Ursus_americanus
ENSBTAG00000052337	RPS29	100	92.857	ENSUAMG00000002506	-	100	92.857	Ursus_americanus
ENSBTAG00000052337	RPS29	98	98.182	ENSUAMG00000012422	-	99	72.000	Ursus_americanus
ENSBTAG00000052337	RPS29	100	94.643	ENSUMAG00000019137	-	100	94.643	Ursus_maritimus
ENSBTAG00000052337	RPS29	98	98.182	ENSUMAG00000007648	-	99	71.000	Ursus_maritimus
ENSBTAG00000052337	RPS29	100	91.071	ENSUMAG00000012903	-	100	91.071	Ursus_maritimus
ENSBTAG00000052337	RPS29	100	80.357	ENSUMAG00000008130	-	100	80.357	Ursus_maritimus
ENSBTAG00000052337	RPS29	100	87.500	ENSVVUG00000016811	-	100	87.500	Vulpes_vulpes
ENSBTAG00000052337	RPS29	100	94.643	ENSVVUG00000000785	-	100	94.643	Vulpes_vulpes
ENSBTAG00000052337	RPS29	98	78.182	ENSVVUG00000029871	-	88	60.440	Vulpes_vulpes
ENSBTAG00000052337	RPS29	100	100.000	ENSXETG00000027734	rps29	100	100.000	Xenopus_tropicalis
ENSBTAG00000052337	RPS29	100	94.643	ENSXCOG00000007248	rps29	71	98.182	Xiphophorus_couchianus
ENSBTAG00000052337	RPS29	80	95.556	ENSXMAG00000019760	-	80	95.556	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	-	ISS	Process
GO:0008270	zinc ion binding	-	ISS	Function
GO:0022627	cytosolic small ribosomal subunit	-	ISS	Component
GO:0042788	polysomal ribosome	-	ISS	Component
GO:0098556	cytoplasmic side of rough endoplasmic reticulum membrane	-	ISS	Component