EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000052491 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 5602 bases
Position: chrX:77691266-77696867
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000054890	RRM_1	PF00076.22	7.7e-43	1	2
ENSBTAP00000054890	RRM_1	PF00076.22	7.7e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000064260	-	642	-	ENSBTAP00000054890	213 (aa)	-	G3MZ94

Gene Model

Click here to download ENSBTAG00000052491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000052491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000052491	-	69	43.750	ENSBTAG00000016849	PABPC1L	55	43.750
ENSBTAG00000052491	-	69	37.838	ENSBTAG00000025848	RBM3	87	37.500
ENSBTAG00000052491	-	97	76.382	ENSBTAG00000017125	PABPC4	57	76.382
ENSBTAG00000052491	-	92	57.812	ENSBTAG00000019942	PABPC5	93	58.163
ENSBTAG00000052491	-	99	97.143	ENSBTAG00000050902	-	100	97.143
ENSBTAG00000052491	-	77	75.460	ENSBTAG00000055300	-	97	75.460
ENSBTAG00000052491	-	74	33.333	ENSBTAG00000004080	TIAL1	73	33.333
ENSBTAG00000052491	-	80	32.237	ENSBTAG00000000613	ELAVL1	94	32.237
ENSBTAG00000052491	-	94	60.500	ENSBTAG00000046902	PABPC4L	95	60.500
ENSBTAG00000052491	-	72	74.026	ENSBTAG00000048536	-	88	74.026
ENSBTAG00000052491	-	98	77.033	ENSBTAG00000046358	PABPC1	59	77.033
ENSBTAG00000052491	-	91	30.808	ENSBTAG00000019182	TIA1	67	30.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000052491	-	94	99.000	ENSG00000184388	PABPC1L2B	100	99.000	Homo_sapiens
ENSBTAG00000052491	-	94	99.000	ENSG00000186288	PABPC1L2A	100	99.000	Homo_sapiens
ENSBTAG00000052491	-	98	76.555	ENSAPOG00000017776	pabpc1b	61	76.555	Acanthochromis_polyacanthus
ENSBTAG00000052491	-	98	77.033	ENSAPOG00000015105	pabpc1a	59	77.033	Acanthochromis_polyacanthus
ENSBTAG00000052491	-	94	99.500	ENSAMEG00000019441	-	100	99.500	Ailuropoda_melanoleuca
ENSBTAG00000052491	-	98	75.598	ENSACIG00000018366	pabpc1b	60	75.598	Amphilophus_citrinellus
ENSBTAG00000052491	-	98	77.033	ENSACIG00000004685	pabpc1a	59	77.033	Amphilophus_citrinellus
ENSBTAG00000052491	-	98	77.033	ENSAOCG00000011656	pabpc1a	59	77.033	Amphiprion_ocellaris
ENSBTAG00000052491	-	98	77.033	ENSAOCG00000019839	pabpc1b	59	77.033	Amphiprion_ocellaris
ENSBTAG00000052491	-	98	77.033	ENSAPEG00000010435	pabpc1b	59	77.033	Amphiprion_percula
ENSBTAG00000052491	-	98	77.033	ENSAPEG00000006963	pabpc1a	59	77.033	Amphiprion_percula
ENSBTAG00000052491	-	98	77.033	ENSATEG00000024852	pabpc1a	59	77.033	Anabas_testudineus
ENSBTAG00000052491	-	98	76.077	ENSATEG00000012917	pabpc1b	59	76.077	Anabas_testudineus
ENSBTAG00000052491	-	94	99.000	ENSANAG00000019429	-	100	99.000	Aotus_nancymaae
ENSBTAG00000052491	-	94	99.000	ENSANAG00000019431	-	100	99.000	Aotus_nancymaae
ENSBTAG00000052491	-	98	75.120	ENSACLG00000014335	pabpc1b	59	75.120	Astatotilapia_calliptera
ENSBTAG00000052491	-	97	78.889	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSBTAG00000052491	-	98	76.555	ENSAMXG00000008599	pabpc1b	59	76.555	Astyanax_mexicanus
ENSBTAG00000052491	-	94	99.000	ENSCJAG00000041326	-	100	99.000	Callithrix_jacchus
ENSBTAG00000052491	-	100	96.244	ENSCAFG00020002052	-	100	96.244	Canis_lupus_dingo
ENSBTAG00000052491	-	94	99.500	ENSCHIG00000011138	-	100	99.500	Capra_hircus
ENSBTAG00000052491	-	94	99.000	ENSCHIG00000006283	-	100	99.000	Capra_hircus
ENSBTAG00000052491	-	94	99.500	ENSTSYG00000001775	-	100	99.500	Carlito_syrichta
ENSBTAG00000052491	-	94	99.000	ENSCPOG00000009525	-	100	99.000	Cavia_porcellus
ENSBTAG00000052491	-	94	99.000	ENSCCAG00000031524	-	100	99.000	Cebus_capucinus
ENSBTAG00000052491	-	94	99.000	ENSCATG00000043125	-	100	99.000	Cercocebus_atys
ENSBTAG00000052491	-	94	99.000	ENSCATG00000042826	-	100	99.000	Cercocebus_atys
ENSBTAG00000052491	-	94	96.500	ENSCLAG00000017409	-	100	96.500	Chinchilla_lanigera
ENSBTAG00000052491	-	94	96.500	ENSCLAG00000017412	-	100	96.500	Chinchilla_lanigera
ENSBTAG00000052491	-	94	99.000	ENSCSAG00000000102	-	100	99.000	Chlorocebus_sabaeus
ENSBTAG00000052491	-	93	93.939	ENSCGRG00001023387	-	98	93.467	Cricetulus_griseus_chok1gshd
ENSBTAG00000052491	-	98	76.077	ENSCSEG00000015241	-	59	76.077	Cynoglossus_semilaevis
ENSBTAG00000052491	-	98	77.033	ENSCSEG00000013324	pabpc1a	59	77.033	Cynoglossus_semilaevis
ENSBTAG00000052491	-	98	76.555	ENSCVAG00000005489	pabpc1b	59	76.555	Cyprinodon_variegatus
ENSBTAG00000052491	-	98	77.033	ENSCVAG00000021872	pabpc1a	59	77.033	Cyprinodon_variegatus
ENSBTAG00000052491	-	98	76.077	ENSDARG00000021140	pabpc1b	99	77.241	Danio_rerio
ENSBTAG00000052491	-	98	76.555	ENSDARG00000017219	pabpc1a	59	76.555	Danio_rerio
ENSBTAG00000052491	-	94	97.500	ENSDNOG00000030926	-	100	97.500	Dasypus_novemcinctus
ENSBTAG00000052491	-	94	97.500	ENSDORG00000011362	-	100	97.500	Dipodomys_ordii
ENSBTAG00000052491	-	100	96.714	ENSEASG00005010399	-	100	96.714	Equus_asinus_asinus
ENSBTAG00000052491	-	100	96.714	ENSECAG00000002620	-	100	96.714	Equus_caballus
ENSBTAG00000052491	-	94	94.500	ENSEEUG00000008203	-	100	94.500	Erinaceus_europaeus
ENSBTAG00000052491	-	98	77.033	ENSELUG00000015062	-	60	77.033	Esox_lucius
ENSBTAG00000052491	-	98	76.555	ENSELUG00000003614	pabpc1a	60	76.555	Esox_lucius
ENSBTAG00000052491	-	90	54.592	ENSELUG00000005389	-	82	54.592	Esox_lucius
ENSBTAG00000052491	-	94	99.500	ENSFCAG00000039701	-	100	99.500	Felis_catus
ENSBTAG00000052491	-	94	99.000	ENSFDAG00000005484	-	100	99.000	Fukomys_damarensis
ENSBTAG00000052491	-	98	76.077	ENSFHEG00000008186	pabpc1b	59	76.077	Fundulus_heteroclitus
ENSBTAG00000052491	-	98	77.033	ENSFHEG00000018979	pabpc1a	59	77.033	Fundulus_heteroclitus
ENSBTAG00000052491	-	98	76.555	ENSGMOG00000013448	pabpc1a	58	76.555	Gadus_morhua
ENSBTAG00000052491	-	98	76.555	ENSGMOG00000002448	-	59	76.555	Gadus_morhua
ENSBTAG00000052491	-	98	76.555	ENSGAFG00000010193	pabpc1b	62	76.555	Gambusia_affinis
ENSBTAG00000052491	-	98	77.033	ENSGAFG00000019750	pabpc1a	63	77.033	Gambusia_affinis
ENSBTAG00000052491	-	97	80.612	ENSGACG00000003771	pabpc1b	64	80.612	Gasterosteus_aculeatus
ENSBTAG00000052491	-	98	77.033	ENSGACG00000003572	pabpc1a	59	77.033	Gasterosteus_aculeatus
ENSBTAG00000052491	-	94	99.000	ENSGGOG00000043933	-	100	99.000	Gorilla_gorilla
ENSBTAG00000052491	-	94	99.000	ENSGGOG00000038606	-	100	99.000	Gorilla_gorilla
ENSBTAG00000052491	-	98	75.120	ENSHBUG00000002075	pabpc1b	62	75.120	Haplochromis_burtoni
ENSBTAG00000052491	-	97	78.889	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSBTAG00000052491	-	94	97.000	ENSHGLG00000019762	-	100	97.000	Heterocephalus_glaber_female
ENSBTAG00000052491	-	94	97.000	ENSHGLG00000019668	-	100	97.000	Heterocephalus_glaber_female
ENSBTAG00000052491	-	94	97.000	ENSHGLG00100020854	-	100	97.000	Heterocephalus_glaber_male
ENSBTAG00000052491	-	89	68.783	ENSHCOG00000003175	pabpc1b	69	67.347	Hippocampus_comes
ENSBTAG00000052491	-	98	77.033	ENSHCOG00000013502	pabpc1a	59	77.033	Hippocampus_comes
ENSBTAG00000052491	-	95	60.000	ENSIPUG00000021244	-	53	60.000	Ictalurus_punctatus
ENSBTAG00000052491	-	98	76.555	ENSIPUG00000010791	-	63	76.555	Ictalurus_punctatus
ENSBTAG00000052491	-	98	76.555	ENSIPUG00000008848	pabpc1a	61	76.555	Ictalurus_punctatus
ENSBTAG00000052491	-	94	98.500	ENSSTOG00000022096	-	100	98.500	Ictidomys_tridecemlineatus
ENSBTAG00000052491	-	94	98.500	ENSSTOG00000026028	-	100	98.500	Ictidomys_tridecemlineatus
ENSBTAG00000052491	-	94	98.000	ENSJJAG00000007037	-	100	98.000	Jaculus_jaculus
ENSBTAG00000052491	-	98	76.077	ENSKMAG00000008049	pabpc1b	64	76.077	Kryptolebias_marmoratus
ENSBTAG00000052491	-	98	77.033	ENSKMAG00000000605	pabpc1a	59	77.033	Kryptolebias_marmoratus
ENSBTAG00000052491	-	98	77.033	ENSLBEG00000026845	pabpc1b	59	77.033	Labrus_bergylta
ENSBTAG00000052491	-	98	77.033	ENSLBEG00000024002	-	59	77.033	Labrus_bergylta
ENSBTAG00000052491	-	93	96.985	ENSLAFG00000023096	-	99	96.985	Loxodonta_africana
ENSBTAG00000052491	-	94	98.507	ENSMFAG00000028878	-	100	98.507	Macaca_fascicularis
ENSBTAG00000052491	-	94	99.000	ENSMMUG00000009740	-	100	99.000	Macaca_mulatta
ENSBTAG00000052491	-	94	99.000	ENSMMUG00000039929	-	100	99.000	Macaca_mulatta
ENSBTAG00000052491	-	94	99.000	ENSMMUG00000037681	-	100	99.000	Macaca_mulatta
ENSBTAG00000052491	-	94	99.000	ENSMNEG00000037732	-	100	99.000	Macaca_nemestrina
ENSBTAG00000052491	-	94	99.000	ENSMLEG00000027495	-	100	99.000	Mandrillus_leucophaeus
ENSBTAG00000052491	-	97	78.889	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSBTAG00000052491	-	98	76.077	ENSMAMG00000014610	pabpc1b	61	76.077	Mastacembelus_armatus
ENSBTAG00000052491	-	98	75.120	ENSMZEG00005026745	pabpc1b	59	75.120	Maylandia_zebra
ENSBTAG00000052491	-	97	78.889	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSBTAG00000052491	-	94	100.000	ENSMICG00000047642	-	100	100.000	Microcebus_murinus
ENSBTAG00000052491	-	97	78.889	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSBTAG00000052491	-	98	77.033	ENSMMOG00000018009	pabpc1b	63	77.033	Mola_mola
ENSBTAG00000052491	-	98	67.000	ENSMODG00000015024	-	58	67.000	Monodelphis_domestica
ENSBTAG00000052491	-	97	73.737	ENSMODG00000013156	-	58	73.737	Monodelphis_domestica
ENSBTAG00000052491	-	98	76.077	ENSMALG00000006066	pabpc1b	64	76.077	Monopterus_albus
ENSBTAG00000052491	-	98	77.033	ENSMALG00000013020	-	64	77.033	Monopterus_albus
ENSBTAG00000052491	-	94	97.500	ENSNGAG00000012688	-	100	97.500	Nannospalax_galili
ENSBTAG00000052491	-	97	78.889	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSBTAG00000052491	-	98	75.120	ENSNBRG00000013737	pabpc1b	63	75.120	Neolamprologus_brichardi
ENSBTAG00000052491	-	94	99.000	ENSNLEG00000018128	-	100	99.000	Nomascus_leucogenys
ENSBTAG00000052491	-	94	96.500	ENSODEG00000018540	-	100	96.500	Octodon_degus
ENSBTAG00000052491	-	98	77.033	ENSONIG00000006871	-	59	77.033	Oreochromis_niloticus
ENSBTAG00000052491	-	98	75.120	ENSONIG00000002717	pabpc1b	59	75.120	Oreochromis_niloticus
ENSBTAG00000052491	-	94	99.500	ENSOCUG00000002565	-	100	99.500	Oryctolagus_cuniculus
ENSBTAG00000052491	-	98	74.163	ENSORLG00000003008	-	60	74.163	Oryzias_latipes
ENSBTAG00000052491	-	97	78.889	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSBTAG00000052491	-	98	74.163	ENSORLG00020022259	-	60	74.163	Oryzias_latipes_hni
ENSBTAG00000052491	-	98	77.033	ENSORLG00020022398	pabpc1a	59	77.033	Oryzias_latipes_hni
ENSBTAG00000052491	-	98	74.163	ENSORLG00015010932	-	60	74.163	Oryzias_latipes_hsok
ENSBTAG00000052491	-	98	77.033	ENSORLG00015013633	pabpc1	59	77.033	Oryzias_latipes_hsok
ENSBTAG00000052491	-	98	77.033	ENSOMEG00000020219	pabpc1a	59	77.033	Oryzias_melastigma
ENSBTAG00000052491	-	98	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSBTAG00000052491	-	94	100.000	ENSOGAG00000026047	-	100	100.000	Otolemur_garnettii
ENSBTAG00000052491	-	94	100.000	ENSOGAG00000029513	-	100	100.000	Otolemur_garnettii
ENSBTAG00000052491	-	94	99.000	ENSOARG00000005943	-	100	99.000	Ovis_aries
ENSBTAG00000052491	-	94	99.000	ENSPPAG00000012920	-	100	99.000	Pan_paniscus
ENSBTAG00000052491	-	94	99.500	ENSPPRG00000011809	-	100	99.500	Panthera_pardus
ENSBTAG00000052491	-	94	99.500	ENSPPRG00000011804	-	100	99.500	Panthera_pardus
ENSBTAG00000052491	-	94	99.000	ENSPTRG00000028252	-	100	99.000	Pan_troglodytes
ENSBTAG00000052491	-	94	99.000	ENSPANG00000011549	-	100	99.000	Papio_anubis
ENSBTAG00000052491	-	98	76.555	ENSPKIG00000005676	pabpc1b	59	76.555	Paramormyrops_kingsleyae
ENSBTAG00000052491	-	98	76.555	ENSPMGG00000023134	-	81	76.555	Periophthalmus_magnuspinnatus
ENSBTAG00000052491	-	98	76.077	ENSPMGG00000022487	pabpc1a	77	76.077	Periophthalmus_magnuspinnatus
ENSBTAG00000052491	-	98	77.033	ENSPFOG00000010815	pabpc1a	58	77.033	Poecilia_formosa
ENSBTAG00000052491	-	98	76.077	ENSPFOG00000005917	pabpc1b	59	76.077	Poecilia_formosa
ENSBTAG00000052491	-	98	76.555	ENSPLAG00000001388	pabpc1b	59	76.555	Poecilia_latipinna
ENSBTAG00000052491	-	98	77.033	ENSPLAG00000004114	pabpc1a	59	77.033	Poecilia_latipinna
ENSBTAG00000052491	-	98	77.033	ENSPMEG00000001334	pabpc1a	59	77.033	Poecilia_mexicana
ENSBTAG00000052491	-	98	76.077	ENSPMEG00000014399	pabpc1b	62	73.206	Poecilia_mexicana
ENSBTAG00000052491	-	98	76.555	ENSPREG00000010911	pabpc1b	62	76.555	Poecilia_reticulata
ENSBTAG00000052491	-	97	78.889	ENSPREG00000019595	pabpc1a	92	81.481	Poecilia_reticulata
ENSBTAG00000052491	-	94	99.000	ENSPPYG00000020468	-	100	99.000	Pongo_abelii
ENSBTAG00000052491	-	94	98.500	ENSPCAG00000005308	-	100	98.500	Procavia_capensis
ENSBTAG00000052491	-	94	99.500	ENSPCOG00000026349	-	100	99.500	Propithecus_coquereli
ENSBTAG00000052491	-	94	95.500	ENSPVAG00000016117	-	100	95.500	Pteropus_vampyrus
ENSBTAG00000052491	-	97	78.889	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSBTAG00000052491	-	98	75.120	ENSPNYG00000012578	pabpc1b	62	75.120	Pundamilia_nyererei
ENSBTAG00000052491	-	98	75.598	ENSPNAG00000028408	pabpc1a	66	75.598	Pygocentrus_nattereri
ENSBTAG00000052491	-	98	77.033	ENSPNAG00000024626	pabpc1b	59	77.033	Pygocentrus_nattereri
ENSBTAG00000052491	-	94	99.000	ENSRBIG00000027173	-	100	99.000	Rhinopithecus_bieti
ENSBTAG00000052491	-	97	78.788	ENSRBIG00000028738	-	69	78.788	Rhinopithecus_bieti
ENSBTAG00000052491	-	94	99.000	ENSRROG00000017404	-	100	99.000	Rhinopithecus_roxellana
ENSBTAG00000052491	-	97	68.657	ENSSHAG00000000511	-	60	68.657	Sarcophilus_harrisii
ENSBTAG00000052491	-	98	77.033	ENSSFOG00015006662	pabpc1a	59	77.033	Scleropages_formosus
ENSBTAG00000052491	-	82	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSBTAG00000052491	-	98	77.033	ENSSFOG00015002752	-	59	77.033	Scleropages_formosus
ENSBTAG00000052491	-	98	77.033	ENSSMAG00000010803	pabpc1a	60	77.033	Scophthalmus_maximus
ENSBTAG00000052491	-	98	76.077	ENSSMAG00000006869	pabpc1b	59	76.077	Scophthalmus_maximus
ENSBTAG00000052491	-	98	77.033	ENSSDUG00000006675	pabpc1a	59	77.033	Seriola_dumerili
ENSBTAG00000052491	-	97	78.889	ENSSDUG00000011965	pabpc1b	60	76.555	Seriola_dumerili
ENSBTAG00000052491	-	98	77.033	ENSSLDG00000011661	pabpc1a	59	77.033	Seriola_lalandi_dorsalis
ENSBTAG00000052491	-	98	76.555	ENSSLDG00000014156	pabpc1b	60	76.555	Seriola_lalandi_dorsalis
ENSBTAG00000052491	-	98	76.555	ENSSPAG00000019265	pabpc1b	65	76.555	Stegastes_partitus
ENSBTAG00000052491	-	98	77.033	ENSSPAG00000014453	-	59	77.033	Stegastes_partitus
ENSBTAG00000052491	-	94	99.500	ENSSSCG00000032167	-	100	99.500	Sus_scrofa
ENSBTAG00000052491	-	94	99.500	ENSSSCG00000036336	-	100	99.500	Sus_scrofa
ENSBTAG00000052491	-	98	77.033	ENSTRUG00000011577	-	59	77.033	Takifugu_rubripes
ENSBTAG00000052491	-	98	76.555	ENSTRUG00000003767	-	61	76.555	Takifugu_rubripes
ENSBTAG00000052491	-	98	77.033	ENSTNIG00000009153	pabpc1b	59	77.033	Tetraodon_nigroviridis
ENSBTAG00000052491	-	98	73.023	ENSTNIG00000013307	pabpc1a	59	73.023	Tetraodon_nigroviridis
ENSBTAG00000052491	-	94	99.500	ENSTTRG00000013181	-	100	99.500	Tursiops_truncatus
ENSBTAG00000052491	-	94	99.500	ENSUAMG00000008089	-	100	99.500	Ursus_americanus
ENSBTAG00000052491	-	98	56.250	ENSUMAG00000023926	-	91	56.250	Ursus_maritimus
ENSBTAG00000052491	-	94	99.500	ENSUMAG00000003364	-	100	99.500	Ursus_maritimus
ENSBTAG00000052491	-	96	98.537	ENSVVUG00000015892	-	99	98.537	Vulpes_vulpes
ENSBTAG00000052491	-	98	76.555	ENSXCOG00000019901	pabpc1b	62	76.555	Xiphophorus_couchianus
ENSBTAG00000052491	-	98	77.033	ENSXCOG00000017066	pabpc1a	63	77.033	Xiphophorus_couchianus
ENSBTAG00000052491	-	98	77.033	ENSXMAG00000002555	pabpc1a	62	77.033	Xiphophorus_maculatus
ENSBTAG00000052491	-	97	78.894	ENSXMAG00000003753	pabpc1b	90	78.894	Xiphophorus_maculatus