EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000052622 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 42060 bases
Position: chr14:13749726-13791785
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059867	RIO1	PF01163.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067812	-	951	-	ENSBTAP00000059867	316 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000052622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000052622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000052622	-	53	34.444	ENSBTAG00000049814	-	77	34.444
ENSBTAG00000052622	-	80	31.955	ENSBTAG00000020417	DAPK3	58	31.955
ENSBTAG00000052622	-	90	31.959	ENSBTAG00000039153	RPS6KA4	73	31.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000052622	-	90	41.404	ENSCPOG00000034310	-	84	41.404	Cavia_porcellus
ENSBTAG00000052622	-	90	55.282	ENSCING00000008201	-	86	55.282	Ciona_intestinalis
ENSBTAG00000052622	-	88	43.972	ENSCGRG00001007918	-	56	43.972	Cricetulus_griseus_chok1gshd
ENSBTAG00000052622	-	87	43.929	ENSCGRG00001010553	-	55	43.929	Cricetulus_griseus_chok1gshd
ENSBTAG00000052622	-	83	42.748	ENSCGRG00001006023	Gm4922	52	42.748	Cricetulus_griseus_chok1gshd
ENSBTAG00000052622	-	83	42.748	ENSCGRG00000009530	Gm4922	52	42.748	Cricetulus_griseus_crigri
ENSBTAG00000052622	-	82	38.077	ENSFDAG00000016208	-	65	36.735	Fukomys_damarensis
ENSBTAG00000052622	-	83	39.850	MGP_CAROLIEiJ_G0015144	Gm4922	52	39.850	Mus_caroli
ENSBTAG00000052622	-	90	42.049	MGP_CAROLIEiJ_G0021081	-	58	42.049	Mus_caroli
ENSBTAG00000052622	-	90	42.049	MGP_CAROLIEiJ_G0021080	-	58	42.049	Mus_caroli
ENSBTAG00000052622	-	90	42.049	MGP_CAROLIEiJ_G0021082	-	58	42.049	Mus_caroli
ENSBTAG00000052622	-	90	42.049	MGP_CAROLIEiJ_G0021079	-	58	42.049	Mus_caroli
ENSBTAG00000052622	-	87	41.754	ENSMUSG00000095190	Gm10668	93	41.754	Mus_musculus
ENSBTAG00000052622	-	85	38.828	ENSMUSG00000044624	Gm4922	53	38.828	Mus_musculus
ENSBTAG00000052622	-	87	41.754	ENSMUSG00000094682	Gm6902	93	41.754	Mus_musculus
ENSBTAG00000052622	-	89	42.199	ENSMUSG00000073458	Smok2a	55	42.199	Mus_musculus
ENSBTAG00000052622	-	88	43.011	ENSMUSG00000073457	Smok2b	57	43.011	Mus_musculus
ENSBTAG00000052622	-	87	41.754	ENSMUSG00000095363	Gm4567	93	41.754	Mus_musculus
ENSBTAG00000052622	-	83	43.123	ENSMUSG00000101361	Gm7356	52	43.123	Mus_musculus
ENSBTAG00000052622	-	87	41.053	ENSMUSG00000101436	Gm5157	93	41.053	Mus_musculus
ENSBTAG00000052622	-	87	41.404	ENSMUSG00000109396	Gm4565	93	41.404	Mus_musculus
ENSBTAG00000052622	-	83	43.333	ENSMUSG00000067941	Gm7168	52	43.333	Mus_musculus
ENSBTAG00000052622	-	89	42.553	ENSMUSG00000079156	Smok3b	55	42.553	Mus_musculus
ENSBTAG00000052622	-	89	42.553	ENSMUSG00000075599	Smok3a	55	42.553	Mus_musculus
ENSBTAG00000052622	-	89	42.657	ENSMUSG00000075598	Smok3c	55	42.657	Mus_musculus
ENSBTAG00000052622	-	94	39.869	ENSMUSG00000095976	Gm5891	96	39.869	Mus_musculus
ENSBTAG00000052622	-	94	39.869	ENSMUSG00000095683	Gm10662	96	39.869	Mus_musculus
ENSBTAG00000052622	-	87	41.404	ENSMUSG00000096283	Gm6176	93	41.404	Mus_musculus
ENSBTAG00000052622	-	83	43.123	ENSMUSG00000101307	Gm7358	52	43.123	Mus_musculus
ENSBTAG00000052622	-	87	41.404	ENSMUSG00000109060	Gm4513	93	41.404	Mus_musculus
ENSBTAG00000052622	-	94	39.869	ENSMUSG00000109516	Gm6882	96	39.869	Mus_musculus
ENSBTAG00000052622	-	85	40.293	MGP_PahariEiJ_G0023763	Gm4922	54	40.293	Mus_pahari
ENSBTAG00000052622	-	81	39.847	MGP_SPRETEiJ_G0015952	Gm4922	51	39.847	Mus_spretus
ENSBTAG00000052622	-	88	44.964	ENSNGAG00000008026	-	55	44.964	Nannospalax_galili
ENSBTAG00000052622	-	83	40.840	ENSOGAG00000033945	-	95	40.824	Otolemur_garnettii
ENSBTAG00000052622	-	91	42.177	ENSPEMG00000022024	-	69	43.165	Peromyscus_maniculatus_bairdii
ENSBTAG00000052622	-	89	42.606	ENSRNOG00000052093	Smok2a	55	42.308	Rattus_norvegicus
ENSBTAG00000052622	-	89	42.606	ENSRNOG00000059551	RGD1560718	55	42.606	Rattus_norvegicus
ENSBTAG00000052622	-	93	38.095	ENSRNOG00000028913	AABR07028872.1	93	38.095	Rattus_norvegicus
ENSBTAG00000052622	-	88	41.577	ENSRNOG00000024200	LOC690235	55	41.577	Rattus_norvegicus
ENSBTAG00000052622	-	84	42.007	ENSRNOG00000025799	RGD1560303	53	42.007	Rattus_norvegicus