EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000053171 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 5034 bases
Position: chr9:29109138-29114171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000061847	RVT_1	PF00078.27	8.9e-54	1	1
ENSBTAP00000061847	Exo_endo_phos	PF03372.23	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000084777	-	5034	-	ENSBTAP00000061847	1233 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000053171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000053171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000053171	-	73	97.461	ENSBTAG00000053134	-	96	97.461
ENSBTAG00000053171	-	64	98.737	ENSBTAG00000051677	-	99	98.737
ENSBTAG00000053171	-	100	99.757	ENSBTAG00000053316	-	97	99.757
ENSBTAG00000053171	-	56	98.978	ENSBTAG00000049240	-	100	98.978
ENSBTAG00000053171	-	66	99.136	ENSBTAG00000052047	-	100	99.136
ENSBTAG00000053171	-	63	98.581	ENSBTAG00000052900	-	99	98.581
ENSBTAG00000053171	-	88	99.630	ENSBTAG00000050534	-	97	99.630
ENSBTAG00000053171	-	59	99.449	ENSBTAG00000051661	-	100	99.449
ENSBTAG00000053171	-	50	96.774	ENSBTAG00000054655	-	94	96.774
ENSBTAG00000053171	-	65	97.739	ENSBTAG00000053585	-	100	97.739
ENSBTAG00000053171	-	97	99.414	ENSBTAG00000053324	-	100	99.414
ENSBTAG00000053171	-	100	99.757	ENSBTAG00000050965	-	97	99.757
ENSBTAG00000053171	-	65	95.387	ENSBTAG00000055074	-	100	95.387
ENSBTAG00000053171	-	70	98.378	ENSBTAG00000054826	-	99	98.378
ENSBTAG00000053171	-	57	98.999	ENSBTAG00000052050	-	95	98.999
ENSBTAG00000053171	-	56	98.983	ENSBTAG00000051741	-	99	98.983
ENSBTAG00000053171	-	54	95.338	ENSBTAG00000052813	-	94	95.338
ENSBTAG00000053171	-	53	99.387	ENSBTAG00000050692	-	100	99.387
ENSBTAG00000053171	-	100	99.757	ENSBTAG00000050847	-	97	99.757
ENSBTAG00000053171	-	61	97.222	ENSBTAG00000052313	-	100	97.222
ENSBTAG00000053171	-	57	99.285	ENSBTAG00000051086	-	95	99.285
ENSBTAG00000053171	-	90	96.296	ENSBTAG00000053930	-	97	96.296
ENSBTAG00000053171	-	88	99.076	ENSBTAG00000054175	-	97	99.076
ENSBTAG00000053171	-	62	99.606	ENSBTAG00000049527	-	100	99.606
ENSBTAG00000053171	-	85	97.816	ENSBTAG00000054392	-	100	97.816
ENSBTAG00000053171	-	72	98.194	ENSBTAG00000051121	-	100	98.194
ENSBTAG00000053171	-	53	99.541	ENSBTAG00000052602	-	100	99.541
ENSBTAG00000053171	-	92	99.559	ENSBTAG00000050735	-	100	99.559
ENSBTAG00000053171	-	100	98.297	ENSBTAG00000051842	-	97	98.297
ENSBTAG00000053171	-	70	99.420	ENSBTAG00000051999	-	100	99.420
ENSBTAG00000053171	-	69	98.474	ENSBTAG00000050251	-	100	98.474
ENSBTAG00000053171	-	52	98.125	ENSBTAG00000055227	-	99	98.125
ENSBTAG00000053171	-	52	99.219	ENSBTAG00000051629	-	96	99.219
ENSBTAG00000053171	-	73	97.572	ENSBTAG00000052999	-	96	97.572
ENSBTAG00000053171	-	54	96.241	ENSBTAG00000052991	-	94	96.241
ENSBTAG00000053171	-	100	99.513	ENSBTAG00000049649	-	97	99.513
ENSBTAG00000053171	-	100	99.351	ENSBTAG00000050912	-	97	99.351
ENSBTAG00000053171	-	73	98.675	ENSBTAG00000052305	-	96	98.675
ENSBTAG00000053171	-	57	95.565	ENSBTAG00000051096	-	95	95.565
ENSBTAG00000053171	-	98	99.586	ENSBTAG00000051208	-	100	99.586
ENSBTAG00000053171	-	72	99.663	ENSBTAG00000049728	-	100	99.663
ENSBTAG00000053171	-	70	98.378	ENSBTAG00000051119	-	99	98.378
ENSBTAG00000053171	-	73	95.475	ENSBTAG00000049834	-	96	95.475
ENSBTAG00000053171	-	55	98.971	ENSBTAG00000049832	-	100	98.971
ENSBTAG00000053171	-	54	97.143	ENSBTAG00000053638	-	94	97.143
ENSBTAG00000053171	-	50	97.749	ENSBTAG00000054546	-	94	97.749
ENSBTAG00000053171	-	92	98.856	ENSBTAG00000049055	-	97	98.856
ENSBTAG00000053171	-	60	98.100	ENSBTAG00000050499	-	99	98.100
ENSBTAG00000053171	-	75	98.490	ENSBTAG00000055052	-	100	98.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000053171	-	77	95.183	ENSCHIG00000008419	-	95	95.263	Capra_hircus
ENSBTAG00000053171	-	57	94.850	ENSCHIG00000008770	-	95	94.850	Capra_hircus
ENSBTAG00000053171	-	52	94.219	ENSCHIG00000001410	-	94	94.219	Capra_hircus
ENSBTAG00000053171	-	75	95.005	ENSCHIG00000008599	-	96	95.005	Capra_hircus
ENSBTAG00000053171	-	66	95.320	ENSCHIG00000010102	-	95	95.320	Capra_hircus
ENSBTAG00000053171	-	54	94.436	ENSCHIG00000002847	-	94	94.436	Capra_hircus
ENSBTAG00000053171	-	59	96.399	ENSCHIG00000002097	-	99	96.399	Capra_hircus
ENSBTAG00000053171	-	94	64.905	ENSCGRG00000019462	-	97	64.905	Cricetulus_griseus_crigri
ENSBTAG00000053171	-	99	64.792	ENSCGRG00000019476	-	96	64.792	Cricetulus_griseus_crigri
ENSBTAG00000053171	-	99	64.556	ENSCGRG00000018650	-	97	64.556	Cricetulus_griseus_crigri
ENSBTAG00000053171	-	99	64.792	ENSCGRG00000018654	-	96	64.792	Cricetulus_griseus_crigri
ENSBTAG00000053171	-	99	64.792	ENSCGRG00000019173	-	96	64.792	Cricetulus_griseus_crigri
ENSBTAG00000053171	-	65	71.517	ENSOCUG00000029539	-	99	71.517	Oryctolagus_cuniculus
ENSBTAG00000053171	-	90	68.350	ENSOCUG00000029721	-	97	68.350	Oryctolagus_cuniculus
ENSBTAG00000053171	-	84	69.519	ENSOCUG00000029631	-	99	69.519	Oryctolagus_cuniculus
ENSBTAG00000053171	-	64	69.571	ENSOCUG00000029715	-	100	69.571	Oryctolagus_cuniculus
ENSBTAG00000053171	-	52	69.953	ENSOCUG00000029694	-	100	69.953	Oryctolagus_cuniculus
ENSBTAG00000053171	-	52	69.315	ENSOCUG00000029389	-	94	69.315	Oryctolagus_cuniculus
ENSBTAG00000053171	-	56	72.238	ENSOCUG00000029477	-	100	72.238	Oryctolagus_cuniculus
ENSBTAG00000053171	-	72	95.928	ENSOARG00000006683	-	94	95.928	Ovis_aries
ENSBTAG00000053171	-	75	93.103	ENSOARG00000011096	-	84	93.103	Ovis_aries
ENSBTAG00000053171	-	100	95.539	ENSOARG00000010889	-	97	95.539	Ovis_aries
ENSBTAG00000053171	-	100	95.458	ENSOARG00000000057	-	97	95.458	Ovis_aries
ENSBTAG00000053171	-	58	94.225	ENSOARG00000006501	-	93	94.225	Ovis_aries
ENSBTAG00000053171	-	100	95.458	ENSOARG00000001175	-	97	95.458	Ovis_aries
ENSBTAG00000053171	-	92	95.335	ENSOARG00000005813	-	97	95.335	Ovis_aries
ENSBTAG00000053171	-	91	95.027	ENSOARG00000008210	-	94	95.027	Ovis_aries
ENSBTAG00000053171	-	58	95.487	ENSOARG00000007587	-	99	95.487	Ovis_aries
ENSBTAG00000053171	-	61	78.947	ENSRNOG00000060618	AABR07027267.1	56	78.947	Rattus_norvegicus
ENSBTAG00000053171	-	88	64.912	ENSRNOG00000057039	AC124874.1	99	64.912	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000047294	AABR07043115.1	71	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	64	78.947	ENSRNOG00000058277	AC080157.1	56	78.947	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000056748	AC229945.1	71	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	52	65.630	ENSRNOG00000005861	Hsd11b1	58	65.630	Rattus_norvegicus
ENSBTAG00000053171	-	66	78.947	ENSRNOG00000045583	AABR07002068.1	56	78.947	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000059133	AABR07020537.1	69	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000060742	AABR07029809.1	70	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000049504	AABR07009221.1	67	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000054519	AABR07053179.1	67	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	66	78.947	ENSRNOG00000034030	AC130162.1	55	78.947	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000056033	AC111632.2	69	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000059691	AABR07033318.1	67	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	93	76.471	ENSRNOG00000058209	AABR07063893.1	70	76.471	Rattus_norvegicus
ENSBTAG00000053171	-	50	76.129	ENSSSCG00000036128	-	92	76.129	Sus_scrofa
ENSBTAG00000053171	-	50	76.290	ENSSSCG00000034665	-	90	76.290	Sus_scrofa
ENSBTAG00000053171	-	75	76.616	ENSSSCG00000040911	-	94	76.616	Sus_scrofa
ENSBTAG00000053171	-	58	76.217	ENSSSCG00000034985	-	99	76.217	Sus_scrofa
ENSBTAG00000053171	-	52	76.094	ENSSSCG00000039035	-	94	76.094	Sus_scrofa
ENSBTAG00000053171	-	57	77.682	ENSSSCG00000038939	-	95	77.682	Sus_scrofa
ENSBTAG00000053171	-	100	75.426	ENSSSCG00000039414	-	97	75.426	Sus_scrofa
ENSBTAG00000053171	-	65	77.419	ENSSSCG00000035060	-	95	77.419	Sus_scrofa
ENSBTAG00000053171	-	65	77.543	ENSSSCG00000037444	-	95	77.543	Sus_scrofa
ENSBTAG00000053171	-	53	76.271	ENSSSCG00000031466	-	89	76.271	Sus_scrofa
ENSBTAG00000053171	-	65	77.916	ENSSSCG00000033555	-	95	77.916	Sus_scrofa
ENSBTAG00000053171	-	62	75.758	ENSSSCG00000032624	-	91	75.758	Sus_scrofa
ENSBTAG00000053171	-	64	74.714	ENSSSCG00000033817	-	100	74.714	Sus_scrofa
ENSBTAG00000053171	-	65	77.171	ENSSSCG00000040141	-	95	77.171	Sus_scrofa
ENSBTAG00000053171	-	92	75.132	ENSSSCG00000036442	-	98	75.132	Sus_scrofa
ENSBTAG00000053171	-	79	75.026	ENSSSCG00000035697	-	100	75.026	Sus_scrofa
ENSBTAG00000053171	-	100	75.345	ENSSSCG00000040939	-	97	75.345	Sus_scrofa
ENSBTAG00000053171	-	59	78.356	ENSSSCG00000039422	-	94	78.356	Sus_scrofa
ENSBTAG00000053171	-	57	75.282	ENSSSCG00000039209	-	100	75.282	Sus_scrofa
ENSBTAG00000053171	-	67	75.271	ENSSSCG00000037083	-	100	75.271	Sus_scrofa