EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000053316 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 5336 bases
Position: chr12:46886913-46892248
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000056886	RVT_1	PF00078.27	5.9e-54	1	1
ENSBTAP00000056886	Exo_endo_phos	PF03372.23	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000084349	-	5336	-	ENSBTAP00000056886	1272 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000053316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000053316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000053316	-	58	99.051	ENSBTAG00000051086	-	100	99.051
ENSBTAG00000053316	-	58	97.962	ENSBTAG00000050499	-	99	97.962
ENSBTAG00000053316	-	52	97.428	ENSBTAG00000054546	-	100	97.428
ENSBTAG00000053316	-	57	99.174	ENSBTAG00000051661	-	100	99.174
ENSBTAG00000053316	-	58	95.393	ENSBTAG00000051096	-	100	95.393
ENSBTAG00000053316	-	55	96.591	ENSBTAG00000053638	-	100	96.591
ENSBTAG00000053316	-	62	98.485	ENSBTAG00000051677	-	99	98.485
ENSBTAG00000053316	-	61	98.452	ENSBTAG00000052900	-	99	98.452
ENSBTAG00000053316	-	63	97.613	ENSBTAG00000053585	-	100	97.613
ENSBTAG00000053316	-	70	99.438	ENSBTAG00000049728	-	100	99.438
ENSBTAG00000053316	-	58	98.780	ENSBTAG00000052050	-	100	98.780
ENSBTAG00000053316	-	68	98.146	ENSBTAG00000054826	-	99	98.146
ENSBTAG00000053316	-	74	97.249	ENSBTAG00000053134	-	100	97.249
ENSBTAG00000053316	-	54	98.832	ENSBTAG00000049240	-	100	98.832
ENSBTAG00000053316	-	92	98.638	ENSBTAG00000049055	-	100	98.638
ENSBTAG00000053316	-	67	98.239	ENSBTAG00000050251	-	100	98.239
ENSBTAG00000053316	-	88	99.465	ENSBTAG00000050534	-	100	99.465
ENSBTAG00000053316	-	51	99.233	ENSBTAG00000050692	-	100	99.233
ENSBTAG00000053316	-	53	98.806	ENSBTAG00000051629	-	100	98.806
ENSBTAG00000053316	-	100	97.956	ENSBTAG00000051842	-	100	97.956
ENSBTAG00000053316	-	51	99.388	ENSBTAG00000052602	-	100	99.388
ENSBTAG00000053316	-	60	99.343	ENSBTAG00000049527	-	100	99.343
ENSBTAG00000053316	-	70	97.968	ENSBTAG00000051121	-	100	97.968
ENSBTAG00000053316	-	55	95.170	ENSBTAG00000052813	-	100	95.170
ENSBTAG00000053316	-	100	99.057	ENSBTAG00000050912	-	100	99.057
ENSBTAG00000053316	-	89	99.382	ENSBTAG00000050735	-	100	99.382
ENSBTAG00000053316	-	68	98.146	ENSBTAG00000051119	-	99	98.146
ENSBTAG00000053316	-	73	98.274	ENSBTAG00000055052	-	100	98.274
ENSBTAG00000053316	-	68	99.188	ENSBTAG00000051999	-	100	99.188
ENSBTAG00000053316	-	74	97.249	ENSBTAG00000052999	-	100	97.249
ENSBTAG00000053316	-	55	95.881	ENSBTAG00000052991	-	100	95.881
ENSBTAG00000053316	-	100	99.450	ENSBTAG00000050847	-	100	99.450
ENSBTAG00000053316	-	52	96.218	ENSBTAG00000054655	-	100	96.218
ENSBTAG00000053316	-	74	98.519	ENSBTAG00000052305	-	100	98.519
ENSBTAG00000053316	-	54	98.692	ENSBTAG00000051741	-	99	98.692
ENSBTAG00000053316	-	63	95.262	ENSBTAG00000055074	-	100	95.262
ENSBTAG00000053316	-	50	97.969	ENSBTAG00000055227	-	99	97.969
ENSBTAG00000053316	-	94	99.246	ENSBTAG00000053324	-	100	99.246
ENSBTAG00000053316	-	59	96.958	ENSBTAG00000052313	-	100	96.958
ENSBTAG00000053316	-	100	99.528	ENSBTAG00000050965	-	100	99.528
ENSBTAG00000053316	-	97	99.757	ENSBTAG00000053171	-	100	99.757
ENSBTAG00000053316	-	95	99.420	ENSBTAG00000051208	-	100	99.420
ENSBTAG00000053316	-	83	97.626	ENSBTAG00000054392	-	100	97.626
ENSBTAG00000053316	-	74	95.132	ENSBTAG00000049834	-	100	95.132
ENSBTAG00000053316	-	53	98.676	ENSBTAG00000049832	-	100	98.676
ENSBTAG00000053316	-	100	99.135	ENSBTAG00000049649	-	100	99.135
ENSBTAG00000053316	-	64	98.889	ENSBTAG00000052047	-	100	98.889
ENSBTAG00000053316	-	88	98.930	ENSBTAG00000054175	-	100	98.930
ENSBTAG00000053316	-	90	95.895	ENSBTAG00000053930	-	99	95.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000053316	-	58	94.580	ENSCHIG00000008770	-	100	94.580	Capra_hircus
ENSBTAG00000053316	-	78	94.970	ENSCHIG00000008419	-	99	95.046	Capra_hircus
ENSBTAG00000053316	-	75	94.792	ENSCHIG00000008599	-	100	94.792	Capra_hircus
ENSBTAG00000053316	-	57	96.122	ENSCHIG00000002097	-	99	96.122	Capra_hircus
ENSBTAG00000053316	-	53	93.814	ENSCHIG00000001410	-	100	93.814	Capra_hircus
ENSBTAG00000053316	-	55	94.176	ENSCHIG00000002847	-	100	94.176	Capra_hircus
ENSBTAG00000053316	-	67	95.065	ENSCHIG00000010102	-	100	95.065	Capra_hircus
ENSBTAG00000053316	-	99	64.172	ENSCGRG00000019476	-	99	64.172	Cricetulus_griseus_crigri
ENSBTAG00000053316	-	94	63.980	ENSCGRG00000019462	-	99	63.980	Cricetulus_griseus_crigri
ENSBTAG00000053316	-	99	63.924	ENSCGRG00000019173	-	99	63.924	Cricetulus_griseus_crigri
ENSBTAG00000053316	-	96	64.556	ENSCGRG00000018650	-	97	64.556	Cricetulus_griseus_crigri
ENSBTAG00000053316	-	99	63.924	ENSCGRG00000018654	-	99	63.924	Cricetulus_griseus_crigri
ENSBTAG00000053316	-	53	67.404	ENSOCUG00000029389	-	99	67.404	Oryctolagus_cuniculus
ENSBTAG00000053316	-	50	69.797	ENSOCUG00000029694	-	100	69.797	Oryctolagus_cuniculus
ENSBTAG00000053316	-	62	69.444	ENSOCUG00000029715	-	100	69.444	Oryctolagus_cuniculus
ENSBTAG00000053316	-	64	71.111	ENSOCUG00000029539	-	99	71.111	Oryctolagus_cuniculus
ENSBTAG00000053316	-	82	69.423	ENSOCUG00000029631	-	99	69.423	Oryctolagus_cuniculus
ENSBTAG00000053316	-	54	72.093	ENSOCUG00000029477	-	100	72.093	Oryctolagus_cuniculus
ENSBTAG00000053316	-	90	67.308	ENSOCUG00000029721	-	99	67.308	Oryctolagus_cuniculus
ENSBTAG00000053316	-	100	95.204	ENSOARG00000001175	-	100	95.204	Ovis_aries
ENSBTAG00000053316	-	92	94.764	ENSOARG00000008210	-	97	94.764	Ovis_aries
ENSBTAG00000053316	-	100	95.204	ENSOARG00000000057	-	100	95.204	Ovis_aries
ENSBTAG00000053316	-	100	95.204	ENSOARG00000010889	-	100	95.204	Ovis_aries
ENSBTAG00000053316	-	58	90.658	ENSOARG00000006501	-	99	90.658	Ovis_aries
ENSBTAG00000053316	-	92	95.064	ENSOARG00000005813	-	100	95.064	Ovis_aries
ENSBTAG00000053316	-	73	92.888	ENSOARG00000011096	-	84	92.888	Ovis_aries
ENSBTAG00000053316	-	56	95.346	ENSOARG00000007587	-	99	95.346	Ovis_aries
ENSBTAG00000053316	-	73	95.558	ENSOARG00000006683	-	99	95.558	Ovis_aries
ENSBTAG00000053316	-	62	74.656	ENSRNOG00000060618	AABR07027267.1	59	74.728	Rattus_norvegicus
ENSBTAG00000053316	-	67	74.425	ENSRNOG00000034030	AC130162.1	58	74.425	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.432	ENSRNOG00000056748	AC229945.1	73	63.432	Rattus_norvegicus
ENSBTAG00000053316	-	85	64.673	ENSRNOG00000057039	AC124874.1	99	64.673	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.645	ENSRNOG00000059691	AABR07033318.1	69	63.645	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.342	ENSRNOG00000056033	AC111632.2	71	63.342	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.522	ENSRNOG00000060742	AABR07029809.1	72	63.522	Rattus_norvegicus
ENSBTAG00000053316	-	51	65.474	ENSRNOG00000005861	Hsd11b1	58	65.474	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.432	ENSRNOG00000047294	AABR07043115.1	73	63.432	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.342	ENSRNOG00000054519	AABR07053179.1	69	63.342	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.612	ENSRNOG00000049504	AABR07009221.1	69	63.612	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.612	ENSRNOG00000058209	AABR07063893.1	72	63.612	Rattus_norvegicus
ENSBTAG00000053316	-	65	74.640	ENSRNOG00000058277	AC080157.1	58	74.716	Rattus_norvegicus
ENSBTAG00000053316	-	92	63.432	ENSRNOG00000059133	AABR07020537.1	71	63.432	Rattus_norvegicus
ENSBTAG00000053316	-	67	74.063	ENSRNOG00000045583	AABR07002068.1	58	74.148	Rattus_norvegicus
ENSBTAG00000053316	-	66	75.385	ENSSSCG00000040141	-	100	75.385	Sus_scrofa
ENSBTAG00000053316	-	63	74.060	ENSSSCG00000032624	-	96	74.060	Sus_scrofa
ENSBTAG00000053316	-	56	76.078	ENSSSCG00000034985	-	99	76.078	Sus_scrofa
ENSBTAG00000053316	-	53	73.932	ENSSSCG00000039035	-	100	73.932	Sus_scrofa
ENSBTAG00000053316	-	52	74.052	ENSSSCG00000034665	-	95	74.052	Sus_scrofa
ENSBTAG00000053316	-	100	74.214	ENSSSCG00000039414	-	100	74.214	Sus_scrofa
ENSBTAG00000053316	-	100	74.214	ENSSSCG00000040939	-	100	74.214	Sus_scrofa
ENSBTAG00000053316	-	66	76.095	ENSSSCG00000033555	-	100	76.095	Sus_scrofa
ENSBTAG00000053316	-	66	75.621	ENSSSCG00000035060	-	100	75.621	Sus_scrofa
ENSBTAG00000053316	-	56	75.141	ENSSSCG00000039209	-	100	75.141	Sus_scrofa
ENSBTAG00000053316	-	60	76.333	ENSSSCG00000039422	-	99	76.333	Sus_scrofa
ENSBTAG00000053316	-	66	75.740	ENSSSCG00000037444	-	100	75.740	Sus_scrofa
ENSBTAG00000053316	-	65	75.151	ENSSSCG00000037083	-	100	75.151	Sus_scrofa
ENSBTAG00000053316	-	54	74.743	ENSSSCG00000031466	-	93	74.743	Sus_scrofa
ENSBTAG00000053316	-	52	73.596	ENSSSCG00000036128	-	98	73.596	Sus_scrofa
ENSBTAG00000053316	-	89	75.044	ENSSSCG00000036442	-	98	75.044	Sus_scrofa
ENSBTAG00000053316	-	62	74.587	ENSSSCG00000033817	-	100	74.587	Sus_scrofa
ENSBTAG00000053316	-	76	74.923	ENSSSCG00000035697	-	100	74.923	Sus_scrofa
ENSBTAG00000053316	-	76	75.078	ENSSSCG00000040911	-	98	75.078	Sus_scrofa
ENSBTAG00000053316	-	58	75.610	ENSSSCG00000038939	-	100	75.610	Sus_scrofa