EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000053531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 1027 bases
Position: chr5:53840974-53842000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000064223	RVT_1	PF00078.27	2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067893	-	1027	-	ENSBTAP00000064223	227 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000053531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000053531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000053531	-	78	82.584	ENSBTAG00000049689	-	52	82.584
ENSBTAG00000053531	-	78	78.090	ENSBTAG00000052786	-	61	78.090
ENSBTAG00000053531	-	84	70.769	ENSBTAG00000048975	-	50	70.769
ENSBTAG00000053531	-	91	84.058	ENSBTAG00000048649	-	53	84.058
ENSBTAG00000053531	-	78	82.584	ENSBTAG00000051558	-	53	82.584
ENSBTAG00000053531	-	78	83.146	ENSBTAG00000052338	-	51	83.146
ENSBTAG00000053531	-	66	86.577	ENSBTAG00000054670	-	60	86.577
ENSBTAG00000053531	-	69	84.713	ENSBTAG00000054885	-	56	84.713
ENSBTAG00000053531	-	74	84.431	ENSBTAG00000053209	-	74	84.431
ENSBTAG00000053531	-	78	82.022	ENSBTAG00000051931	-	51	82.022
ENSBTAG00000053531	-	91	52.174	ENSBTAG00000051025	-	53	52.174
ENSBTAG00000053531	-	78	81.461	ENSBTAG00000051738	-	51	81.461
ENSBTAG00000053531	-	91	78.261	ENSBTAG00000049313	-	54	78.261
ENSBTAG00000053531	-	91	81.643	ENSBTAG00000050999	-	52	81.643
ENSBTAG00000053531	-	71	81.481	ENSBTAG00000053125	-	70	81.481
ENSBTAG00000053531	-	78	81.461	ENSBTAG00000048462	-	52	81.461
ENSBTAG00000053531	-	84	73.057	ENSBTAG00000051279	-	52	73.057
ENSBTAG00000053531	-	78	83.708	ENSBTAG00000050067	-	52	83.708
ENSBTAG00000053531	-	91	79.227	ENSBTAG00000051943	-	60	79.227
ENSBTAG00000053531	-	78	80.899	ENSBTAG00000048382	-	50	80.899
ENSBTAG00000053531	-	66	83.893	ENSBTAG00000048330	-	51	83.893
ENSBTAG00000053531	-	87	82.323	ENSBTAG00000050915	-	52	82.323
ENSBTAG00000053531	-	91	74.396	ENSBTAG00000050072	-	52	74.396
ENSBTAG00000053531	-	78	80.337	ENSBTAG00000051389	-	60	80.337
ENSBTAG00000053531	-	85	73.301	ENSBTAG00000052766	-	50	73.301
ENSBTAG00000053531	-	81	81.522	ENSBTAG00000053987	-	51	81.522
ENSBTAG00000053531	-	78	80.337	ENSBTAG00000055251	-	53	80.337
ENSBTAG00000053531	-	78	85.393	ENSBTAG00000048347	-	51	85.393
ENSBTAG00000053531	-	91	77.778	ENSBTAG00000050908	-	75	77.778
ENSBTAG00000053531	-	78	79.213	ENSBTAG00000048762	-	52	79.213
ENSBTAG00000053531	-	70	77.500	ENSBTAG00000048799	-	54	77.500
ENSBTAG00000053531	-	90	77.451	ENSBTAG00000048915	-	68	77.451
ENSBTAG00000053531	-	87	71.500	ENSBTAG00000051236	-	51	71.500
ENSBTAG00000053531	-	82	72.727	ENSBTAG00000049176	-	54	72.727
ENSBTAG00000053531	-	78	81.461	ENSBTAG00000050934	-	63	81.461
ENSBTAG00000053531	-	66	79.195	ENSBTAG00000054650	-	52	79.195
ENSBTAG00000053531	-	58	77.273	ENSBTAG00000049997	-	54	77.273
ENSBTAG00000053531	-	81	81.081	ENSBTAG00000053388	-	66	81.081
ENSBTAG00000053531	-	72	81.595	ENSBTAG00000049121	-	62	81.595
ENSBTAG00000053531	-	81	78.804	ENSBTAG00000048826	-	75	78.804
ENSBTAG00000053531	-	78	83.146	ENSBTAG00000055168	-	56	83.146
ENSBTAG00000053531	-	91	78.846	ENSBTAG00000052888	-	85	78.846
ENSBTAG00000053531	-	81	80.978	ENSBTAG00000052470	-	50	80.978
ENSBTAG00000053531	-	71	82.716	ENSBTAG00000049349	-	60	82.716
ENSBTAG00000053531	-	78	80.337	ENSBTAG00000049887	-	50	80.337
ENSBTAG00000053531	-	78	78.771	ENSBTAG00000053045	-	53	78.771
ENSBTAG00000053531	-	91	80.193	ENSBTAG00000039523	-	52	80.193
ENSBTAG00000053531	-	78	82.022	ENSBTAG00000051674	-	56	82.022
ENSBTAG00000053531	-	91	75.962	ENSBTAG00000053945	-	60	75.962
ENSBTAG00000053531	-	62	82.270	ENSBTAG00000049379	-	54	82.270
ENSBTAG00000053531	-	78	85.955	ENSBTAG00000049147	-	52	85.955
ENSBTAG00000053531	-	76	82.659	ENSBTAG00000052639	-	66	82.659
ENSBTAG00000053531	-	78	79.775	ENSBTAG00000048725	-	50	79.775
ENSBTAG00000053531	-	91	78.744	ENSBTAG00000050287	-	50	78.744
ENSBTAG00000053531	-	91	82.609	ENSBTAG00000054630	-	52	82.609
ENSBTAG00000053531	-	75	64.327	ENSBTAG00000051438	-	50	64.327
ENSBTAG00000053531	-	78	79.775	ENSBTAG00000055116	-	52	79.775
ENSBTAG00000053531	-	78	83.146	ENSBTAG00000055119	-	51	83.146
ENSBTAG00000053531	-	78	85.955	ENSBTAG00000053731	-	52	85.955
ENSBTAG00000053531	-	78	80.337	ENSBTAG00000054644	-	51	80.337
ENSBTAG00000053531	-	81	82.065	ENSBTAG00000055301	-	54	82.065
ENSBTAG00000053531	-	81	81.522	ENSBTAG00000049783	-	55	81.522
ENSBTAG00000053531	-	78	80.899	ENSBTAG00000049669	-	52	80.899
ENSBTAG00000053531	-	87	71.028	ENSBTAG00000053359	-	60	71.028
ENSBTAG00000053531	-	78	82.584	ENSBTAG00000054049	-	51	82.584
ENSBTAG00000053531	-	66	83.893	ENSBTAG00000052178	-	52	83.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000053531	-	78	66.292	ENSACAG00000028547	-	60	66.292	Anolis_carolinensis
ENSBTAG00000053531	-	78	66.292	ENSACAG00000028455	-	66	66.292	Anolis_carolinensis
ENSBTAG00000053531	-	67	78.808	ENSCHIG00000026896	-	63	78.808	Capra_hircus
ENSBTAG00000053531	-	66	79.866	ENSCHIG00000009883	-	55	79.866	Capra_hircus
ENSBTAG00000053531	-	67	47.059	ENSCSEG00000013812	-	74	47.059	Cynoglossus_semilaevis
ENSBTAG00000053531	-	77	42.286	ENSLACG00000012050	-	67	42.286	Latimeria_chalumnae
ENSBTAG00000053531	-	85	45.098	ENSLOCG00000010365	-	92	45.098	Lepisosteus_oculatus
ENSBTAG00000053531	-	78	61.236	ENSLOCG00000000690	-	63	61.236	Lepisosteus_oculatus
ENSBTAG00000053531	-	52	52.137	ENSLOCG00000009926	-	56	53.982	Lepisosteus_oculatus
ENSBTAG00000053531	-	100	36.719	ENSLOCG00000014274	-	63	36.719	Lepisosteus_oculatus
ENSBTAG00000053531	-	71	51.744	ENSLOCG00000014208	-	83	51.744	Lepisosteus_oculatus
ENSBTAG00000053531	-	65	43.537	ENSOANG00000022508	-	79	43.537	Ornithorhynchus_anatinus
ENSBTAG00000053531	-	66	88.591	ENSOARG00000013517	-	73	88.591	Ovis_aries
ENSBTAG00000053531	-	66	87.919	ENSOARG00000016639	-	70	87.919	Ovis_aries
ENSBTAG00000053531	-	70	82.911	ENSOARG00000004042	-	68	82.911	Ovis_aries