EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000054339 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 1171 bases
Position: chr9:64201938-64203108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060899	RVT_1	PF00078.27	2.9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000086509	-	1171	-	ENSBTAP00000060899	331 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000054339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000054339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000054339	-	50	82.927	ENSBTAG00000052701	-	99	82.927
ENSBTAG00000054339	-	99	91.159	ENSBTAG00000049538	-	97	91.159
ENSBTAG00000054339	-	100	97.885	ENSBTAG00000051723	-	98	97.885
ENSBTAG00000054339	-	90	74.074	ENSBTAG00000052711	-	87	74.074
ENSBTAG00000054339	-	100	80.363	ENSBTAG00000053711	-	92	80.363
ENSBTAG00000054339	-	99	97.561	ENSBTAG00000050692	-	50	97.561
ENSBTAG00000054339	-	85	96.099	ENSBTAG00000050159	-	100	96.099
ENSBTAG00000054339	-	100	97.885	ENSBTAG00000055227	-	51	97.885
ENSBTAG00000054339	-	73	96.266	ENSBTAG00000055310	-	100	96.266
ENSBTAG00000054339	-	81	93.309	ENSBTAG00000054573	-	96	92.336
ENSBTAG00000054339	-	58	30.570	ENSBTAG00000054554	-	52	30.570
ENSBTAG00000054339	-	66	96.330	ENSBTAG00000050601	-	86	96.330
ENSBTAG00000054339	-	68	30.702	ENSBTAG00000050184	-	59	30.702
ENSBTAG00000054339	-	100	97.583	ENSBTAG00000052602	-	51	97.583
ENSBTAG00000054339	-	87	94.792	ENSBTAG00000054067	-	100	94.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000054339	-	94	80.000	ENSSSCG00000033884	-	88	80.000	Sus_scrofa
ENSBTAG00000054339	-	99	77.879	ENSSSCG00000034560	-	82	93.878	Sus_scrofa
ENSBTAG00000054339	-	78	81.008	ENSSSCG00000037695	-	100	81.008	Sus_scrofa