EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000054573 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 1104 bases
Position: chr4:67001833-67002936
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060319	RVT_1	PF00078.27	1.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000074284	-	1104	-	ENSBTAP00000060319	286 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000054573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000054573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000054573	-	58	80.606	ENSBTAG00000052701	-	99	80.606
ENSBTAG00000054573	-	96	92.701	ENSBTAG00000051723	-	79	93.680
ENSBTAG00000054573	-	94	70.896	ENSBTAG00000052711	-	79	70.896
ENSBTAG00000054573	-	96	77.737	ENSBTAG00000053711	-	74	78.358
ENSBTAG00000054573	-	96	92.336	ENSBTAG00000054339	-	81	93.309
ENSBTAG00000054573	-	96	91.606	ENSBTAG00000050159	-	95	92.565
ENSBTAG00000054573	-	56	93.168	ENSBTAG00000050601	-	62	94.872
ENSBTAG00000054573	-	96	90.511	ENSBTAG00000054067	-	93	91.450
ENSBTAG00000054573	-	84	91.701	ENSBTAG00000055310	-	100	91.701
ENSBTAG00000054573	-	95	89.744	ENSBTAG00000049538	-	80	90.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000054573	-	96	74.088	ENSSSCG00000034560	-	82	87.755	Sus_scrofa
ENSBTAG00000054573	-	94	78.810	ENSSSCG00000033884	-	75	79.545	Sus_scrofa
ENSBTAG00000054573	-	90	77.519	ENSSSCG00000037695	-	100	77.519	Sus_scrofa