EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000054826 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 2619 bases
Position: chr10:59949325-59951943
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000058011	RVT_1	PF00078.27	3.3e-54	1	1
ENSBTAP00000058011	Exo_endo_phos	PF03372.23	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067853	-	2619	-	ENSBTAP00000058011	872 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000054826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000054826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000054826	-	88	98.172	ENSBTAG00000049728	-	86	98.172
ENSBTAG00000054826	-	99	98.262	ENSBTAG00000050847	-	68	98.262
ENSBTAG00000054826	-	79	98.692	ENSBTAG00000051741	-	99	98.692
ENSBTAG00000054826	-	61	96.082	ENSBTAG00000053585	-	67	96.082
ENSBTAG00000054826	-	85	95.794	ENSBTAG00000053930	-	64	95.794
ENSBTAG00000054826	-	82	98.174	ENSBTAG00000050534	-	64	98.174
ENSBTAG00000054826	-	98	97.887	ENSBTAG00000055052	-	92	97.887
ENSBTAG00000054826	-	87	96.689	ENSBTAG00000052313	-	99	96.689
ENSBTAG00000054826	-	82	97.472	ENSBTAG00000054175	-	64	97.472
ENSBTAG00000054826	-	51	96.154	ENSBTAG00000055227	-	69	96.154
ENSBTAG00000054826	-	99	98.030	ENSBTAG00000050912	-	68	98.030
ENSBTAG00000054826	-	61	97.015	ENSBTAG00000052305	-	57	97.015
ENSBTAG00000054826	-	91	98.106	ENSBTAG00000051677	-	99	98.106
ENSBTAG00000054826	-	99	98.378	ENSBTAG00000051208	-	71	98.378
ENSBTAG00000054826	-	100	99.083	ENSBTAG00000051119	-	100	99.083
ENSBTAG00000054826	-	99	97.219	ENSBTAG00000051842	-	68	97.219
ENSBTAG00000054826	-	83	99.036	ENSBTAG00000051661	-	100	99.036
ENSBTAG00000054826	-	98	97.887	ENSBTAG00000050251	-	100	97.887
ENSBTAG00000054826	-	99	96.640	ENSBTAG00000051121	-	97	96.640
ENSBTAG00000054826	-	87	99.212	ENSBTAG00000049527	-	100	99.212
ENSBTAG00000054826	-	86	98.794	ENSBTAG00000050499	-	100	98.794
ENSBTAG00000054826	-	88	96.475	ENSBTAG00000054392	-	73	96.475
ENSBTAG00000054826	-	88	97.781	ENSBTAG00000049055	-	65	97.781
ENSBTAG00000054826	-	61	96.435	ENSBTAG00000053134	-	56	96.435
ENSBTAG00000054826	-	99	98.494	ENSBTAG00000049649	-	68	98.494
ENSBTAG00000054826	-	70	96.737	ENSBTAG00000052900	-	78	96.737
ENSBTAG00000054826	-	99	98.146	ENSBTAG00000053316	-	68	98.146
ENSBTAG00000054826	-	99	98.262	ENSBTAG00000050965	-	68	98.262
ENSBTAG00000054826	-	75	99.235	ENSBTAG00000052602	-	100	99.235
ENSBTAG00000054826	-	99	98.260	ENSBTAG00000051999	-	100	98.260
ENSBTAG00000054826	-	88	98.042	ENSBTAG00000050735	-	68	98.042
ENSBTAG00000054826	-	99	98.146	ENSBTAG00000053324	-	72	98.146
ENSBTAG00000054826	-	61	95.336	ENSBTAG00000052999	-	57	95.336
ENSBTAG00000054826	-	88	97.650	ENSBTAG00000052047	-	95	97.650
ENSBTAG00000054826	-	75	99.080	ENSBTAG00000050692	-	100	99.080
ENSBTAG00000054826	-	78	98.382	ENSBTAG00000049832	-	100	98.382
ENSBTAG00000054826	-	62	94.041	ENSBTAG00000049834	-	57	94.041
ENSBTAG00000054826	-	99	98.378	ENSBTAG00000053171	-	70	98.378
ENSBTAG00000054826	-	61	92.724	ENSBTAG00000055074	-	67	92.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000054826	-	56	37.271	ENSACAG00000029344	-	80	34.929	Anolis_carolinensis
ENSBTAG00000054826	-	51	93.665	ENSCHIG00000010102	-	52	93.665	Capra_hircus
ENSBTAG00000054826	-	83	95.845	ENSCHIG00000002097	-	99	95.845	Capra_hircus
ENSBTAG00000054826	-	67	93.504	ENSCHIG00000008419	-	58	93.621	Capra_hircus
ENSBTAG00000054826	-	63	93.285	ENSCHIG00000008599	-	57	93.285	Capra_hircus
ENSBTAG00000054826	-	89	67.308	ENSCGRG00000019462	-	65	67.308	Cricetulus_griseus_crigri
ENSBTAG00000054826	-	98	66.940	ENSCGRG00000019476	-	67	66.940	Cricetulus_griseus_crigri
ENSBTAG00000054826	-	98	66.940	ENSCGRG00000018654	-	66	66.940	Cricetulus_griseus_crigri
ENSBTAG00000054826	-	98	66.940	ENSCGRG00000018650	-	68	66.940	Cricetulus_griseus_crigri
ENSBTAG00000054826	-	98	66.940	ENSCGRG00000019173	-	66	66.940	Cricetulus_griseus_crigri
ENSBTAG00000054826	-	97	71.277	ENSOCUG00000029631	-	81	71.277	Oryctolagus_cuniculus
ENSBTAG00000054826	-	83	70.110	ENSOCUG00000029721	-	63	70.110	Oryctolagus_cuniculus
ENSBTAG00000054826	-	87	69.139	ENSOCUG00000029715	-	95	69.139	Oryctolagus_cuniculus
ENSBTAG00000054826	-	59	94.358	ENSOARG00000006683	-	55	94.358	Ovis_aries
ENSBTAG00000054826	-	88	94.256	ENSOARG00000005813	-	65	94.256	Ovis_aries
ENSBTAG00000054826	-	54	96.000	ENSOARG00000007587	-	66	96.000	Ovis_aries
ENSBTAG00000054826	-	99	94.438	ENSOARG00000011096	-	78	94.438	Ovis_aries
ENSBTAG00000054826	-	99	94.206	ENSOARG00000000057	-	68	94.206	Ovis_aries
ENSBTAG00000054826	-	99	94.322	ENSOARG00000010889	-	68	94.322	Ovis_aries
ENSBTAG00000054826	-	87	93.783	ENSOARG00000008210	-	63	93.783	Ovis_aries
ENSBTAG00000054826	-	99	94.438	ENSOARG00000001175	-	68	94.438	Ovis_aries
ENSBTAG00000054826	-	60	94.242	ENSOARG00000013495	-	78	94.242	Ovis_aries
ENSBTAG00000054826	-	98	65.217	ENSRNOG00000056748	AC229945.1	53	65.217	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.452	ENSRNOG00000059133	AABR07020537.1	51	65.452	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.452	ENSRNOG00000060742	AABR07029809.1	52	65.452	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.570	ENSRNOG00000058209	AABR07063893.1	52	65.570	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.376	ENSRNOG00000059691	AABR07033318.1	50	65.376	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.217	ENSRNOG00000054519	AABR07053179.1	50	65.217	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.100	ENSRNOG00000056033	AC111632.2	51	65.100	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.570	ENSRNOG00000049504	AABR07009221.1	50	65.570	Rattus_norvegicus
ENSBTAG00000054826	-	98	65.217	ENSRNOG00000047294	AABR07043115.1	53	65.217	Rattus_norvegicus
ENSBTAG00000054826	-	80	66.904	ENSRNOG00000057039	AC124874.1	64	66.904	Rattus_norvegicus
ENSBTAG00000054826	-	98	75.235	ENSSSCG00000039414	-	67	75.235	Sus_scrofa
ENSBTAG00000054826	-	90	74.333	ENSSSCG00000033817	-	100	74.333	Sus_scrofa
ENSBTAG00000054826	-	98	75.117	ENSSSCG00000040939	-	67	75.117	Sus_scrofa
ENSBTAG00000054826	-	63	77.514	ENSSSCG00000040911	-	55	77.514	Sus_scrofa
ENSBTAG00000054826	-	72	74.563	ENSSSCG00000039209	-	89	74.563	Sus_scrofa
ENSBTAG00000054826	-	95	74.910	ENSSSCG00000037083	-	100	74.910	Sus_scrofa
ENSBTAG00000054826	-	98	75.235	ENSSSCG00000036442	-	73	75.235	Sus_scrofa
ENSBTAG00000054826	-	71	74.879	ENSSSCG00000035697	-	64	74.879	Sus_scrofa